Protein Overview: RRN10

General Information:
Name(s) found:	RRN10 / YBL025W [SGD]
Description(s) found: Found 32 descriptions. SHOW ALL	Protein involved in promoting high level transcription of rDNA, subunit of UAF (upstream activation factor) for RNA polymerase I [SGD]
Organism:	Saccharomyces cerevisiae
Length:	145 amino acids
Gene Ontology:
Cellular Component:	RNA polymerase I upstream activating factor complex [TAS]
Biological Process:	transcription from RNA polymerase I promoter [TAS]
Molecular Function:	RNA polymerase I transcription factor activity [TAS] rDNA binding [TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRNVYEACS NIIKEFGTHV VSADEVLAEK IDNAVPIPFK TREEIDADVE KDRNEGVFEG  60
   61 NIIPDIDLRV VHYYATQLCL NKYPHLINAF DETSLITLGL LIEKWVKDYL TSIQTEQGRQ 120
  121 SKVIGKGPCE FISKHIDYRH APGNI

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	(MIPS) Mewes HW, et al. (2004)		RRN10 RRN5 RRN9
View Details	Qiu et al. (2008)		RRN10 RRN11 RRN3 RRN5 RRN6 RRN7 TFB5 UAF30

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	RRN10	ATG20	2	Uetz P, et al. (2000)
View Screen	RRN10	RRN9	2	Unpublished Fields Lab Data
View Screen	ATG20	RRN10	2	Unpublished Fields Lab Data
View Screen	RRN10	APL2	2	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	RRN10	Huh WK, et al. (2003)
View Data	RRN10 and NOP56	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..145]	Pfam	95.431798	No description for PF05234.2 was found. No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2