Protein Overview: RRN7

General Information:
Name(s) found:	RRN7 / YJL025W [SGD]
Description(s) found: Found 28 descriptions. SHOW ALL	Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p [SGD]
Organism:	Saccharomyces cerevisiae
Length:	514 amino acids
Gene Ontology:
Cellular Component:	RNA polymerase I transcription factor complex [TAS]
Biological Process:	transcription from RNA polymerase I promoter [TAS]
Molecular Function:	RNA polymerase I transcription factor activity [TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFIRGPIC GTDNCPSRLW RIIDGRRTCQ YGHVMEGDVE FNDDEDDLNG LGAGVITRRL  60
   61 NLTTNATGSF QSSQLTNSQL LQQQQRQSHK KFKKLIGHEA KLLFLKSFQF ILKRQIRWLI 120
  121 TEMRFPKEFE HVAKIIWLKI LKTINDQPQE ELKLQLHMTS TISILYLAST HLSLPVYTCD 180
  181 YIKWICTAKM PYFQASEILP KSWRIQLPNY YVSILEGSIS PFNGQLYNKI ALTCGMIHFK 240
  241 EFFNSEISCQ GLLLKLVMQC ALPPEFYFYT KQVIEFEETD IRNLTLWERT DERHTGRVSN 300
  301 HAELRVLSYF MLTINWMLSF DRDRQYPLKW ILSLTESLTQ RTTTSESIGR NIVKVVYPDK 360
  361 PTSSDYFQWS EEETLEFLKW MEKQFLPTQT KSLHNENGSM EMTIDQKIAR RKLYKIFPLD 420
  421 REANHDGEFN DSTHQLTFIE DLQERYAKQT PFFESNKIRD SLNYQEANPP ARKEAIGRLL 480
  481 THIASQLLVD FAISKEQLKD CISRIKNACL HRMN

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	(MIPS) Mewes HW, et al. (2004)		RRN11 RRN6 RRN7 SPT15
View Details	Krogan NJ, et al. (2006)		RRN11 RRN6 RRN7
View Details	Qiu et al. (2008)		RRN10 RRN11 RRN3 RRN5 RRN6 RRN7 RRN9 SPT15 TFB5 UAF30

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	ROM2	RRN7	2	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	RRN7 and NOP56	Huh WK, et al. (2003)
View Data	RRN7	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..514]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2