General Information: |
|
Name(s) found: |
APL4 /
YPR029C
[SGD]
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Description(s) found:
Found 25 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 832 amino acids |
Gene Ontology: |
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Cellular Component: |
AP-1 adaptor complex
[IPI][ISS]
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Biological Process: |
vesicle-mediated transport
[IPI][ISS]
Golgi to vacuole transport [IMP] |
Molecular Function: |
clathrin binding
[IPI][ISS]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MGSSLRSFIK DVRGAKTLAD ERAIITKQSA KIRTKLRDDH LPHEKRRVNI QKLLYLYILG 60 61 EKTHFGQVES INLIASDDFV DKRLGYLAAT LLLDESEDLL TLLTNMLNND LHHPNKYAVS 120 121 LALTSLGFLS SPELARDLYP DVENIIKNSR DPFLLKKALQ CAAKLIFKDV SLLEIFNIED 180 181 ITKILSSHSI CTHGVLLGVT KIIQSILLIG LNRKKDEDED EDGIDYSNDI LSPLSLLLRD 240 241 FFIRLENMNS KNIEPGYDVQ GICDPFLQCE IIYTLKLYFQ VGELLNSNNV LDYKDNFCDL 300 301 LTRIATNTDS TKNSGQAILY ETVKTIFSLD LNQPLRVLGI NILAKFLAGK DNNTKYVSLN 360 361 TLLKVVPQEP TAVQRHRKFI SHCLQDTDVS IRMRALELSF AILDDSNLVE LVNELMKFLA 420 421 KQDEDSKDLI IYTIDHLIDT FDTRVVKDES WKLDVFFNIL KLVGSFINYE KINDILIIIN 480 481 NTSQLSDKSE FLRKMLTISL NGTSAEISEE NIGWQLVLIW CIGEYGDLVL NEGNKNGADI 540 541 INESSITDYL LTLQELYTAT NLKIINYILT AALKLSVRFH DAKNIEKLRQ LILSYTDSTD 600 601 LSLQMKSNQY EIFFNQSISV KKIILETMPK FEKITEEQDN GKALSKNLIS NEPVDLLSDL 660 661 LGEDSKAESK ASTGDNVKPI DILEEIFGEK NDIAQVPKNA NKEESINHSS AVEANSGVTL 720 721 PLDANKIYDS SSLNVYASLL SANSGLAHLD LYFQAKSLIS DLKTFCAVPK AQKLTLGQLY 780 781 PSSTINASQI CKQSLKISGS GKLKLRVKLD FHLNGSSSIT NEQFDHKFDE TL |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) | APL2 APL4 APM1 APM2 APS1 YFL034W | |
View Details | (MIPS) Mewes HW, et al. (2004) | APL2 APL4 APM1 APS1 | |
View Details | Krogan NJ, et al. (2006) | APL2 APL4 APM1 APM2 APS1 CST26 GAL10 IRC6 YFL034W | |
View Details | Gavin AC, et al. (2006) | APL2 APL4 APM1 APM2 APS1 | |
View Details | Gavin AC, et al. (2002) | APL2 APL4 APM1 APM2 APS1 MIS1 RPA135 | |
View Details | Ho Y, et al. (2002) | APL2 APL4 APM1 BRX1 CIC1 KRI1 KRR1 NMA1 NOG1 NOP4 PAB1 PWP1 RCL1 TIF6 TUF1 | |
View Details | Qiu et al. (2008) | APL2 APL4 APL5 APM1 APM2 APS1 ENT5 RET3 SAR1 SVP26 VPS53 YOS1 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
View Run | No Comments | Schneider, DA, et al. (2006) | |
View Run | #03 Alpha Factor Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #29 Asynchronous Prep5-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #11 Mitotic Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..104] | 402.9897 | Adaptin alpha C subunit N-terminal fragment | |
2 | View Details | [105..178] | 402.9897 | Adaptin alpha C subunit N-terminal fragment | |
3 | View Details | [179..337] | 402.9897 | Adaptin alpha C subunit N-terminal fragment | |
4 | View Details | [338..407] | 402.9897 | Adaptin alpha C subunit N-terminal fragment | |
5 | View Details | [408..534] | 402.9897 | Adaptin alpha C subunit N-terminal fragment | |
6 | View Details | [535..688] | 1.20899 | View MSA. No confident structure predictions are available. | |
7 | View Details | [689..832] | 31.0 | Gamma1-adaptin domain |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||
1 | No functions predicted. | ||||||||||||
2 |
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3 | No functions predicted. | ||||||||||||
4 | No functions predicted. | ||||||||||||
5 | No functions predicted. | ||||||||||||
6 | No functions predicted. | ||||||||||||
7 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)