| General Information: |
|
| Name(s) found: |
COG4 /
YPR105C
[SGD]
|
| Description(s) found:
Found 26 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 861 amino acids |
Gene Ontology: |
|
| Cellular Component: |
Golgi transport complex
[IPI ]
|
| Biological Process: |
intra-Golgi vesicle-mediated transport
[IGI][IPI]
retrograde transport, vesicle recycling within Golgi [IMP ]
|
| Molecular Function: |
molecular_function
[ND]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MEGQKSNASW ESSIIEGQLS KNLARYTLLL DKLSTLSQID KLSEVIANDY AKQSKQLNAF 60
61 VQQSQSSLNK ESRKLELQRT NLTTTLTQFH ETVATISSSN ARAKAIHDDI ETVDQERALV 120
121 NKTLQFVKDV RTLKNNISLA HSALETKDYL VAATAINEIR SLPDKKLIVS EFAKKVVPSS 180
181 EIPEEPAILI KNWCKELTSL FQEQFMEATR TQDIKELTLM FKMFPMIGQD VLGLDLYSKY 240
241 VCDIIADESR KIMSNSMENS TKFQGFFSQV LLHLFKIVST IINDHSKVIA TCYGKKHMVH 300
301 VMEKVEKEAD LQASLILDIF METRKIERTI HDINEWEHSQ KNEDVNIDSN QSDIETDGET 360
361 EKSSIISIHD LALLIMEFSQ ILQNWSMYSR FYSVKWNEFS DLHPHVLQPP PPIADGKFAL 420
421 KLKQDKVFDE FQVFVLNHLQ RSFRNSISLE ELPSLNDLIT AVPLNDHDNI SYPVTSVLDD 480
481 LILLVRKNLI SVVNTGQFKL LASFLNELVK FFQNRFLVKF MQNKFKLLQS KLASNVSLKR 540
541 YIPKGEEQSA TSRSVSPPAN KFSPLSRFTF RGAAASALTN IQSNLQAVVA EDEDSILALH 600
601 HYLIYLNTLY LSKVYVHRLL SIEILEDDSQ RILRDNFPFD NDAAQLQNLI INSEKLVLEQ 660
661 TDKLSKWAVK YLFQNILQNR VRNLLGTVFV NSASSNSSTS NQKNVSRDYS AGSNQKNYIT 720
721 SIEDFEDLSQ INSFNSKWNQ LIIPYKNILH NEAYAELLSV IVDYIVTTLE QRIWTLEFNE 780
781 LGVTKLDREL SLFIGNMCGL NYNLREKFLK LTQIVLLLGL DDDNFDLTTG DIKDDFNGTF 840
841 DWVINSQERI KARNMKIDRT Q |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
COG1 COG2 COG3 COG4 COG5 COG6 COG7 COG8 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
COG1 COG2 COG3 COG4 COG5 COG6 COG7 COG8 |
| View Details | Krogan NJ, et al. (2006) |
|
COG1 COG2 COG3 COG4 COG5 COG6 COG7 COG8 |
| View Details | Gavin AC, et al. (2006) |
|
COG1 COG2 COG3 COG4 COG5 COG6 COG7 COG8 IML1 |
| View Details | Qiu et al. (2008) |
|
COG1 COG2 COG3 COG4 COG5 COG6 COG7 COG8 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | identification data - first search in cascade | Green EM, et al (2005) | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
| View Run | #29 Asynchronous Prep5-TiO2 Flowthrough | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..228] |  |
7.522879 | Heavy meromyosin subfragment |
| 2 | View Details | [229..558] | |
N/A | No confident structure predictions are available. |
| 3 | View Details | [559..861] | |
2.014941 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)