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Protein Overview: YMR031C

General Information:
Name(s) found: YMR031C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Protein of unknown function with similarity to Ykl050cp and Uso1p; the authentic, non-tagged protein is detected in a phosphorylated state in highly purified mitochondria in high-throughput studies; possible component of the eisosome [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 843 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLISAVEDR DIHNIGKTSG GGSRTSSITS SKKSLKHGSK SLRKPKVYQT TGEPLSREAL  60
   61 YKAKLKYGVY QSPAQSYSIG VSDAHAASDK AANLAHDNQT TVEAYKRMFI DPNATKAASK 120
  121 MGPKVVRNNS ITSATSKTSK ESQTKRKSKE SPGAAASKAY SMTMETTSLS SQTNSRSYSI 180
  181 TSASSVLSGA SGSFNSTVNP KPKTLNLEKV LVGAEKKAES RIKERWEPEK TNFQYGVKTD 240
  241 EHGNLNQFSF SNEMMNNIMA KVDAPKAQDL QKVKKVSAEK EAKSMKFALG AANAVKDMHP 300
  301 GEDIDKSIAL KAQKRETYLS QLTSQQVLTL ARANVDRQLD IIEKSDMHRK LFTNMEYNKA 360
  361 AVAVAQSNHQ KKTEFHNKIN MGGGLFLSPE DITKIASGLI SPVLGEVSER AEAQRAMDEE 420
  421 IAERTEAYNK SSNEWETMER SIISNDAKVL TTTANRHQTE KKTSQEKIKA SFDALVARMD 480
  481 TKVAERETLL EDTKSKEIEF KKQMQQELKD EKARLDQDLE EWGKKCEQDI TEARKEQEEL 540
  541 LKPYHDDLAN AEAEHKTLVE ERDEINAEIS RLQDAIVDHK RKISGYGNDL DAQKNRNIRE 600
  601 DDKLLELGQT KESLESHLND DVIILANKAK EQAELSTKEA RLKQLEVDSL INERKSELNA 660
  661 TEIELKKEKL NLLEAMKDVA SARGDDKIDE EKVKKLIGMT SEEYLTQNKS VEKNVEDLPT 720
  721 QLEKIEEGDE LKKEEIVGAE TKNSGGDGVP VSTAAKEATE TSSAVQTKEP EEKISIGNKS 780
  781 SGKEDANDCK SAEHSKEISV SQKAGNNKSL GVSPDSLEHT FSGFSQGSSI EDDQDAISNQ 840
  841 EKK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) YGR130C YMR031C
    View Details Krogan NJ, et al. (2006) ATF2 YGR130C YMR031C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run ASF1 3829 - low filter Green EM, et al (2005)
    View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
    View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
    View Run MLP2 #31 Asynchronous Prep (Protease cleavage) Keck JM, et al. (2011)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YMR031C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] MSA 42.215997 View MSA. No confident structure predictions are available.
    2 View Details [382..445] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [446..843] PSI-BLAST 44.616428 Heavy meromyosin subfragment
    4 View Details [517..843] PSI-BLAST 13.221849 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.21996214365885 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.17665418880398 bayes_pls_golite062009
  • DNA binding
    		•  1.07598753330232 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.03922880212908 bayes_pls_golite062009
  • transcription factor activity
    		•  0.497219747270883 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle