General Information: |
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Name(s) found: |
YGR027W-B
[SGD]
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Description(s) found:
Found 26 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 1755 amino acids |
Gene Ontology: |
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Cellular Component: |
retrotransposon nucleocapsid
[ISS![]() |
Biological Process: |
transposition, RNA-mediated
[ISS![]() |
Molecular Function: |
DNA-directed DNA polymerase activity
[ISS![]() RNA-directed DNA polymerase activity [ISS ![]() RNA binding [ISS ![]() protein binding [ISS ![]() ribonuclease activity [ISS ![]() peptidase activity [ISS ![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MESQQLSQHS HISHGSACAS VTSKEVHTNQ DPLDVSASKT EECEKASTKA NSQQTTTPAS 60 61 SAVPENPHHA SPQTAQSHSP QNGPYPQQCM MTQNQANPSG WSFYGHPSMI PYTPYQMSPM 120 121 YFPPGPQSQF PQYPSSVGTP LSTPSPESGN TFTDSSSADS DMTSTKKYVR PPPMLTSPND 180 181 FPNWVKTYIK FLQNSNLGGI IPTVNGKPVR QITDDELTFL YNTFQIFAPS QFLPTWVKDI 240 241 LSVDYTDIMK ILSKSIEKMQ SDTQEANDIV TLANLQYNGS TPADAFETKV TNIIDRLNNN 300 301 GIHINNKVAC QLIMRGLSGE YKFLRYTRHR HLNMTVAELF LDIHAIYEEQ QGSRNSKPNY 360 361 RRNLSDEKND SRSYTNTTKP KVIARNPQKT NNSKSKTARA HNVSTSNNSP STDNDSISKS 420 421 TTEPIQLNNK HDLHLGQELT ESTVNHTNHS DDELPGHLLL DSGASRTLIR SAHHIHSASS 480 481 NPDINVVDAQ KRNIPINAIG DLQFHFQDNT KTSIKVLHTP NIAYDLLSLN ELAAVDITAC 540 541 FTKNVLERSD GTVLAPIVQY GDFYWVSKRY LLPSNISVPT INNVHTSEST RKYPYPFIHR 600 601 MLAHANAQTI RYSLKNNTIT YFNESDVDWS SAIDYQCPDC LIGKSTKHRH IKGSRLKYQN 660 661 SYEPFQYLHT DIFGPVHNLP KSAPSYFISF TDETTKFRWV YPLHDRREDS ILDVFTTILA 720 721 FIKNQFQASV LVIQMDRGSE YTNRTLHKFL EKNGITPCYT TTADSRAHGV AERLNRTLLD 780 781 DCRTQLQCSG LPNHLWFSAI EFSTIVRNSL ASPKSKKSAR QHAGLAGLDI STLLPFGQPV 840 841 IVNDHNPNSK IHPRGIPGYA LHPSRNSYGY IIYLPSLKKT VDTTNYVILQ GKESRLDQFN 900 901 YDALTFDEDL NRLTASYHSF IASNEIQESN DLNIESDHDF QSDIELHPEQ PRNVLSKAVS 960 961 PTDSTPPSTH TEDSKRVSKT NIRAPREVDP NISESNILPS KKRSSTPQIS NIESTGSGGM1020 1021 HKLNVPLLAP MSQSNTHESS HASKSKDFRH SDSYSENETN HTNVPISSTG GTNNKTVPQI1080 1081 SDQETEKRII HRSPSIDASP PENNSSHNIV PIKTPTTVSE QNTEESIIAD LPLPDLPPES1140 1141 PTEFPDPFKE LPPINSRQTN SSLGGIGDSN AYTTINSKKR SLEDNETEIK VSRDTWNTKN1200 1201 MRSLEPPRSK KRIHLIAAVK AVKSIKPIRT TLRYDEAITY NKDIKEKEKY IEAYHKEVNQ1260 1261 LLKMKTWDTD EYYDRKEIDP KRVINSMFIF NKKRDGTHKA RFVARGDIQH PDTYDSGMQS1320 1321 NTVHHYALMT SLSLALDNNY YITQLDISSA YLYADIKEEL YIRPPPHLGM NDKLIRLKKS1380 1381 LYGLKQSGAN WYETIKSYLI QQCGMEEVRG WSCVFKNSQV TICLFVDDMV LFSKNLNSNK1440 1441 RIIDKLKMQY DTKIINLGES DEEIQYDILG LEIKYQRGKY MKLGMENSLT EKIPKLNVPL1500 1501 NPKGRKLSAP GQPGLYIDQQ ELELEEDDYK MKVHEMQKLI GLASYVGYKF RFDLLYYINT1560 1561 LAQHILFPSK QVLDMTYELI QFIWNTRDKQ LIWHKSKPVK PTNKLVVISD ASYGNQPYYK1620 1621 SQIGNIYLLN GKVIGGKSTK ASLTCTSTTE AEIHAISESV PLLNNLSYLI QELDKKPITK1680 1681 GLLTDSKSTI SIIISNNEEK FRNRFFGTKA MRLRDEVSGN HLHVCYIETK KNIADVMTKP1740 1741 LPIKTFKLLT NKWIH |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Qiu et al. (2008) |
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YAR009C YDR210C-C YDR210C-D YDR210W-B YDR261C-D YDR316W-B YDR365W-B YER160C YFL002W-A, YGR161W-B YGR027W-B YGR038C-B YGR161C-D YHL009W-B YJL113W YLR157C-B YLR227W-B YLR410W-B YML039W YML045W YMR045C YMR050C YNL284C-B YOL103W-B YOR192C-B YOR343W-A YOR343W-B YPL257W-B YPR158C-D YPR158W-B |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | No Comments | Green EM, et al (2005) | |
View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
View Run | cac1: TAP-tagged | Green EM, et al (2005) | |
View Run | Dam1-765 complex purified from yeast with Dad1-TAP | Shimogawa MM, et al. (2006) | |
View Run | No Comments | Schneider, DA, et al. (2006) | |
View Run | phosphorylation data - cascade search | Green EM, et al (2005) | |
View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
View Run | Sample boi 1 with ha tag from october 2005 | McCusker D, et al (2007) | |
View Run | Sample boi1 with gst from october 2005 | McCusker D, et al (2007) | |
View Run | Sample bob1 (2nd set) from october 2005 | McCusker D, et al (2007) | |
View Run | #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) | |
View Run | #04 Alpha Factor Prep2 | Keck JM, et al. (2011) | |
View Run | #03 Alpha Factor Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #02 Alpha Factor Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) | |
View Run | #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
View Run | #11 Mitotic Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) | |
View Run | #06 Alpha Factor Prep3-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)