| General Information: |
|
| Name(s) found: |
NOT5 /
YPR072W
[SGD]
|
| Description(s) found:
Found 27 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 560 amino acids |
Gene Ontology: |
|
| Cellular Component: |
cytoplasm
[IDA ]
CCR4-NOT core complex [IPI ]
|
| Biological Process: |
nuclear-transcribed mRNA poly(A) tail shortening
[IDA]
regulation of transcription from RNA polymerase II promoter [IPI ]
RNA elongation from RNA polymerase II promoter [IMP ]
protein ubiquitination [IMP ]
|
| Molecular Function: |
ubiquitin-protein ligase activity
[IMP]
3'-5'-exoribonuclease activity [IMP ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MSQRKLQQDI DKLLKKVKEG IEDFDDIYEK FQSTDPSNSS HREKLESDLK REIKKLQKHR 60
61 DQIKTWLSKE DVKDKQSVLM TNRRLIENGM ERFKSVEKLM KTKQFSKEAL TNPDIIKDPK 120
121 ELKKRDQVLF IHDCLDELQK QLEQYEAQEN EEQTERHEFH IANLENILKK LQNNEMDPEP 180
181 VEEFQDDIKY YVENNDDPDF IEYDTIYEDM GCEIQPSSSN NEAPKEGNNQ TSLSSIRSSK 240
241 KQERSPKKKA PQRDVSISDR ATTPIAPGVE SASQSISSTP TPVSTDTPLH TVKDDSIKFD 300
301 NSTLGTPTTH VSMKKKESEN DSEQQLNFPP DRTDEIRKTI QHDVETNAAF QNPLFNDELK 360
361 YWLDSKRYLM QPLQEMSPKM VSQLESSLLN CPDSLDADSP CLYTKPLSLP HPTSIFFPNE 420
421 PIRFVYPYDV PLNLTNNEND TDNKFGKDSK AKSKKDDDIY SRTSLARIFM KFDLDTLFFI 480
481 FYHYQGSYEQ FLAARELFKN RNWLFNKVDR CWYYKEIEKL PPGMGKSEEE SWRYFDYKKS 540
541 WLARRCGNDF VYNEEDFEKL |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
CDC36 NOT5 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
CAF16 CAF4 CCR4 CDC36 CDC39 DBF2 DHH1 IBA57 MOB1 MOT2 NOT3 NOT5 POP2 |
| View Details | Gavin AC, et al. (2002) |
|
AHA1 ATP11 CAF130 CAF40 CCR4 CCT6 CDC36 CDC39 COP1 FAS2 GCN1 MOT2 NOT3 NOT5 PDC1 POL1 POL12 POP2 PRI1 PRI2 RVB2 SAM1 SEC27 TFC7 TFP1 YRA1 |
| View Details | Qiu et al. (2008) |
|
CAF16 CAF4 CAF40 CCR4 CDC36 CDC39 DBF2 DHH1 MOB1 MOT2 NOT3 NOT5 POP2 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | McCusker D, et al (2007) | |
| View Run | control 1 | McCusker D, et al (2007) | |
| View Run | control 2 | McCusker D, et al (2007) | |
| View Run | experimental1 - mih1-1 | McCusker D, et al (2007) | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample boi 1 with ha tag from october 2005 | McCusker D, et al (2007) | |
| View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..260] |  |
22.221849 | Heavy meromyosin subfragment |
| 2 | View Details | [261..560] | |
16.508997 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)