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The process of introducing a phosphate group on to an amino acid residue in the C-terminal domain of RNA polymerase II. Typically, this occurs during the transcription cycle and results in production of an RNA polymerase II enzyme where the carboxy-terminal domain (CTD) of the largest subunit is extensively phosphorylated, often referred to as hyperphosphorylated or the II(0) form. Specific types of phosphorylation within the CTD are usually associated with specific regions of genes, though there are exceptions. The phosphorylation state regulates the association of specific complexes such as the capping enzyme or 3'-RNA processing machinery to the elongating RNA polymerase complex. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of an endocardial precursor cell. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of the mammary line, placode or bud. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a cell to a specific fate. The process of removing a phosphate group from an amino acid residue in the C-terminal domain of RNA polymerase II. Some dephosphorylation occurs during transcription while some may occur after the enzyme is released from the template in order to prepare it for the beginning of the transcription cycle again. RNA polymerase II with little or no phosphorylation is referred to as the hypophosphorylated or II(A) form. The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter during mitosis. Any process that modulates the rate, frequency or extent of a process involved in starting transcription from the RNA polymerase II promoter. Any process that regulates transcription such that the target genes are transcribed as part of the G1/S phase of the mitotic cell cycle. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the initial primordium of the lung is formed. Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the kidney progresses from its initial formation to the mature state. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter contributing to the formation of the anterior neural plate. Any process that modulates the frequency, rate or extent of RNA elongation, the extension of an RNA molecule after transcription initiation by the addition of ribonucleotides, catalyzed by RNA polymerase II. Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA. Any process that modulates the frequency, rate or extent of cellular DNA-dependent transcription. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter. Any process that modulates the frequency, rate or extent of global transcription from Pol II promoter. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that ultimately results in a cell being specified to adopt a definitive endodermal cell fate. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. Any process that modulates the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). The cellular synthesis of RNA on a template of DNA. Any process involving carbon catabolites that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter. Any process that regulates transcription such that the target genes are transcribed as part of the G2/M phase of the mitotic cell cycle. Any process that regulates transcription such that the target genes are transcribed as part of the G2 phase of the mitotic cell cycle. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter during meiosis. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter contributing to the formation of the posterior neural plate. A cell cycle process that regulates transcription such that the target genes are transcribed as part of the S phase of the mitotic cell cycle. Any process that regulates transcription such that the target genes are transcribed as part of the G1 phase of the mitotic cell cycle. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of a myocardial precursor cell.

View Gene Ontology (GO) Term

GO TERM SUMMARY
Name: regulation of transcription from RNA polymerase II promoter
Acc: GO:0006357
Aspect: Biological Process
Desc: Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
Synonyms:
  • regulation of transcription from Pol II promoter
Proteins in PDR annotated with:
   This term: 616 [Search]
   Term or descendants: 2188 [Search]


[geneontology.org]
INTERACTIVE GO GRAPH

GO:0006357 - regulation of transcription from RNA polymerase II promoter (interactive image map)
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle