| General Information: |
|
| Name(s) found: |
YBR012W-A
[SGD]
|
| Description(s) found:
Found 26 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 440 amino acids |
Gene Ontology: |
|
| Cellular Component: |
retrotransposon nucleocapsid
[ISS ]
|
| Biological Process: |
transposition, RNA-mediated
[ISS]
|
| Molecular Function: |
RNA binding
[ISS]
protein binding [ISS ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MESQQLSNYP HISHGSACAS VTSKEVHTNQ DPLDVSASKI QEYDKASTKA NSQQTTTPAS 60
61 SAVPENPHHA SPQPASVPPP QNGPYPQQCM MTQNQANPSG WSFYGHPSMI PYTPYQMSPM 120
121 YFPPGPQSQF PQYPSSVGTP LSTPSPESGN TFTDSSSADS DMTSTKKYVR PPPMLTSPND 180
181 FPNWVKTYIK FLQNSNLGGI IPTVNGKPVR PITDDELTFL YNAFQIFAPS QFLPTWVKDI 240
241 LSVDYTDIMK ILSKSIEKMQ SDTQEANDIV TLANLQYNGS TPADAFETKV TNIIDRLNNN 300
301 GIHINNKVAC QLIMRGLSGE YKFLRYTRHR HLNMTVAELF LDIHAIYEEQ QGSRNSKPNY 360
361 RRNPSDEKND SRSYTNTTKP KVIARNPQKT NNSKSKTARA HNVSTSNNSP STDNDSISKS 420
421 TTEPIQLNNK HDLHLRPETY |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Qiu et al. (2008) |
|
YBR012W-A YER159C-A, YDR31... YER160C |
The following runs contain data for this protein:
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..135] |  |
4.0 | Sec24 |
| 2 | View Details | [136..212] | |
1.159996 | View MSA. No confident structure predictions are available. |
| 3 | View Details | [213..373] | |
N/A | No confident structure predictions are available. |
| 4 | View Details | [374..440] | |
1.1 | HIV nucleocapsid |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)