Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR012W-A.
| Description | E-value | Query Range |
Subject Range |
|
|
572.0 | [0..1] | [438..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MESQQLSNYP HISHGSACAS VTSKEVHTNQ DPLDVSASKI QEYDKASTKA NSQQTTTPAS 60
61 SAVPENPHHA SPQPASVPPP QNGPYPQQCM MTQNQANPSG WSFYGHPSMI PYTPYQMSPM 120
121 YFPPGPQSQF PQYPS
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [136-212] |
1 11 21 31 41 51
| | | | | |
1 SVGTPLSTPS PESGNTFTDS SSADSDMTST KKYVRPPPML TSPNDFPNWV KTYIKFLQNS 60
61 NLGGIIPTVN GKPVRPI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [213-373] |
1 11 21 31 41 51
| | | | | |
1 TDDELTFLYN AFQIFAPSQF LPTWVKDILS VDYTDIMKIL SKSIEKMQSD TQEANDIVTL 60
61 ANLQYNGSTP ADAFETKVTN IIDRLNNNGI HINNKVACQL IMRGLSGEYK FLRYTRHRHL 120
121 NMTVAELFLD IHAIYEEQQG SRNSKPNYRR NPSDEKNDSR S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [374-440] |
1 11 21 31 41 51
| | | | | |
1 YTNTTKPKVI ARNPQKTNNS KSKTARAHNV STSNNSPSTD NDSISKSTTE PIQLNNKHDL 60
61 HLRPETY
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 1a1tA |
| Description: | HIV nucleocapsid |
Matching Structure (courtesy of the PDB): |
|
