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Protein Overview: YJL070C

General Information:
Name(s) found: YJL070C [SGD]
Description(s) found:
Found 31 descriptions.
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  • Putative protein of unknown function with similarity to AMP deaminases; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YJL070C is a non-essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 888 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAVERRPSL LFDEYQNSVT KPNETKNKEA RVLSENDGDV SPSVLKQKEI SVDDMDMISL  60
   61 PTEFDRQMVL GSPMFFDLED EENKIDPLPS VSHHYGNGES DSFVSSYTPS NLKTGEETKD 120
  121 LFINPFELVS QMRKRYIAAS KQDGISNIKN DTEKWFLYPK PLPKFWRFED DKRFQDPSDS 180
  181 DLNDDGDSTG TGAATPHRHG YYYPSYFTDH YYYYTKSGLK GKGNIKVPYT GEYFDLEDYK 240
  241 KQYIYHLSNQ ENTQNPLSPY SSKEESLEEE FLTDVPTFQE FRDDFAYIIE LIQSHKFNEV 300
  301 SRKRLSYLLD KFELFQYLNS KKEILANKNV PYRDFYNSRK VDRDLSLSGC ISQRQLSEYI 360
  361 WEKINLEPER IVYQDPETSR KLSLRDIFQF GCSSNDQPIA IGLKLIDDEF LDWYRNIYLI 420
  421 DYHLTPNKVA KLVGKEMRFY LLAKVFLEFD NFIEGEYLAE IFIKYVIHIL EKSKYQLAQV 480
  481 SVNFQFYSSG EDWYKKFSQW LLRWKLVSYN IRWNIQIARI FPKLFKENVV SNFQEFLDLI 540
  541 FNPLFTLEKE QLPIDSSVNT DIIGLQFFLS NVCSMDLVIK ESDEYYWKEF TDMNCKPKFW 600
  601 TAQGDNPTVA HYMYYIYKSL AKVNFLRSQN LQNTITLRNY CSPLSSRTSQ FGVDLYFTDQ 660
  661 VESLVCNLLL CNGGLLQVEP LWDTATMIQY LFYLFQIPIL AAPLSSVSLL NSQKSTFLKN 720
  721 KNVLLEHDYL KDQETAKINP SRDITVGEQR SYETNPFMKM FKMGLKISLS SKSILYNSSY 780
  781 TLEPLIEEYS VAASIYLLNP TDLCELSRTS VLSSGYEGWY KAHWIGVGVK KAPYFEENVG 840
  841 GIDNWYDTAK DTSIKHNVPM IRRRYRKETL DQEWNFVRDH FGVINSIW

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) AMD1 YJL070C
    View Details Krogan NJ, et al. (2006) AMD1 RRB1 YJL070C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YJL070C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..426] deduced N/A No confident structure predictions are available.
    2 View Details [427..888] ORFEUS 14.57 No description for 1m7mA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  1.10207799789608 bayes_pls_golite062009
  • catalytic activity
    		•  0.935564737557247 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle