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Bait Protein: CEP3
Organism: Saccharomyces cerevisiae
Publication: Sandall S, Severin F, McLeod IX, Yates JR 3rd, Oegema K, Hyman A, Desai A. A Bir1-Sli15 complex connects centromeres to microtubules and is required to sense kinetochore tension. Cell. 2006;127(6):1179-91.
Comments: sample cbf3 from feb 2005

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  Hit Protein Protein Desc Sequence Count Spectrum Count Sequence Coverage NSAF Mol. Wt.
[View Peptides]   SPT4 Protein involved in the regulating Pol I and Pol II transcription, pre-mRNA processing, kinetochore ... 5 13 78.4% 0.00246 11158
[View Peptides]   EF1B_YEAST (P32471) Elongation factor 1-beta (EF-1-beta) 56 1196 75.6% 0.113 22689
[View Peptides]   TEF4 Translation elongation factor EF-1 gamma 75 2138 72.8% 0.1 46520
[View Peptides]   RET3 Zeta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles; involved ... 13 40 72.5% 0.00408 21688
[View Peptides]   RPP2B Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction ... 11 73 71.8% 0.0128 11050
[View Peptides]   SEC21 Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat... 63 456 68.4% 0.00941 104831
[View Peptides]   PUP2 Alpha 5 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism; human homolog is s... 20 221 68.1% 0.0164 28617
[View Peptides]   CDC48 ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p a... 78 1073 67.4% 0.0248 91996
[View Peptides]   RPB4 RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved recruitmen... 12 40 65.6% 0.00349 25414
[View Peptides]   PRE9 Alpha 3 subunit of the 20S proteasome, the only nonessential 20S subunit; may be replaced by the alp... 14 332 65.1% 0.0248 28714
[View Peptides]   SCL1 Alpha 1 subunit of the 20S proteasome involved in the degradation of ubiquitinated substrates; 20S p... 22 155 64.7% 0.0119 28001
[View Peptides]   GRX3 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase; monothiol glut... 16 119 64.6% 0.00806 32481
[View Peptides]   CAM1 Nuclear protein required for transcription of MXR1; binds the MXR1 promoter in the presence of other... 50 1456 63.9% 0.0677 47088
[View Peptides]   SUI2 Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start... 23 539 63.2% 0.0342 34718
[View Peptides]   PRE1 Beta 4 subunit of the 20S proteasome; localizes to the nucleus throughout the cell cycle 10 38 63.1% 0.0037 22517
[View Peptides]   gi|135054, gi|4593 gi|4593|emb|CAA27719.1| unnamed protein product [Saccharomyces cerevisiae], gi|135054|sp|P12385.1|ER... 43 647 62.7% 0.0286 48991
[View Peptides]   RPN1_YEAST (P38764) 26S proteasome regulatory subunit RPN1 (Proteasome non-ATPase subunit 1) 62 334 62.1% 0.0065 109361
[View Peptides]   SEC27 Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport... 48 582 61.6% 0.0126 99445
[View Peptides]   RPB10 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III 4 32 61.4% 0.00882 8278
[View Peptides]   RPB7 RNA polymerase II subunit B16; forms two subunit dissociable complex with Rpb4p; involved recruitmen... 6 62 58.5% 0.007 19058
[View Peptides]   PRE4 Beta 7 subunit of the 20S proteasome 15 86 58.3% 0.00624 29443
[View Peptides]   PRE5 Alpha 6 subunit of the 20S proteasome 12 137 57.7% 0.0113 25604
[View Peptides]   SSZ1 Hsp70 protein that interacts with Zuo1p (a DnaJ homolog) to form a ribosome-associated complex that ... 46 317 57.0% 0.0107 62186
[View Peptides]   PRE6 Alpha 4 subunit of the 20S proteasome; may replace alpha 3 subunit (Pre9p) under stress conditions t... 16 58 56.7% 0.00441 28439
[View Peptides]   RNA1 GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport 20 40 56.5% 0.0019 45816
[View Peptides]   RPC31 RNA polymerase III subunit C31 10 15 55.8% 0.00115 27724
[View Peptides]   RPB3 RNA polymerase II third largest subunit B44, part of central core; similar to prokaryotic alpha subu... 16 48 55.7% 0.00291 35298
[View Peptides]   COP1 Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secr... 64 590 54.9% 0.00948 135607
[View Peptides]   PUP3 Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism; human homolog is su... 16 203 54.1% 0.0191 22605
[View Peptides]   RAD6 Ubiquitin-conjugating enzyme (E2), involved in postreplication repair (as a heterodimer with Rad18p)... 3 4 53.5% 4.49E-4 19706
[View Peptides]   PRE7 Beta 6 subunit of the 20S proteasome 9 126 53.1% 0.0101 26871
[View Peptides]   RPC19 RNA polymerase subunit AC19, common to RNA polymerases I and III 6 9 52.8% 0.00122 16151
[View Peptides]   PRE2 Beta 5 subunit of the 20S proteasome, responsible for the chymotryptic activity of the proteasome 18 156 52.6% 0.0105 31637
[View Peptides]   SEC28 Epsilon-COP subunit of the coatomer; regulates retrograde Golgi-to-ER protein traffic; stabilizes Co... 16 229 52.0% 0.0149 33829
[View Peptides]   IKI3 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; main... 58 332 51.8% 0.00475 152990
[View Peptides]   PRE8 Alpha 2 subunit of the 20S proteasome 13 86 51.6% 0.00664 27162
[View Peptides]   ABP1 Actin-binding protein of the cortical actin cytoskeleton, important for activation of the Arp2/3 com... 43 463 51.4% 0.0151 65576
[View Peptides]   SNF4 Activating gamma subunit of the AMP-activated Snf1p kinase complex (contains Snf1p and a Sip1p/Sip2p... 11 43 51.2% 0.00258 36401
[View Peptides]   PRE3 Beta 1 subunit of the 20S proteasome, responsible for cleavage after acidic residues in peptides 11 204 50.2% 0.0183 23548
[View Peptides]   SEC26 Essential beta-coat protein of the COPI coatomer, involved in ER-to-Golgi protein trafficking and ma... 53 515 49.8% 0.0102 109019
[View Peptides]   BCP1 Essential protein involved in nuclear export of Mss4p, which is a lipid kinase that generates phosph... 10 20 47.7% 0.00136 32661
[View Peptides]   TAF14 Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes, involved in RNA polymerase II transcrip... 6 10 47.5% 7.91E-4 27440
[View Peptides]   CIA1 WD40 repeat protein involved in assembly of cytosolic and nuclear iron-sulfur proteins; similar to t... 11 32 47.3% 0.00187 37275
[View Peptides]   POL30 Proliferating cell nuclear antigen (PCNA), functions as the sliding clamp for DNA polymerase delta; ... 11 19 47.3% 0.00142 28916
[View Peptides]   RPB2 RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subun... 48 96 46.3% 0.00151 138751
[View Peptides]   PBY1 Putative tubulin tyrosine ligase associated with P-bodies 24 34 45.8% 8.71E-4 86439
[View Peptides]   PIL1 Primary component of eisosomes, which are large immobile cell cortex structures associated with endo... 11 282 45.7% 0.0161 38349
[View Peptides]   YPR148C Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 13 25 45.5% 0.00111 49279
[View Peptides]   RPT5 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 14 24 45.4% 0.00107 48256
[View Peptides]   LSP1 Primary component of eisosomes, which are large immobile patch structures at the cell cortex associa... 13 274 45.2% 0.0155 38071
[View Peptides]   RRP5 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both ... 78 782 45.1% 0.00873 193133
[View Peptides]   DCP1 Subunit of the Dcp1p-Dcp2p decapping enzyme complex, which removes the 5' cap structure from mRNAs p... 7 26 43.3% 0.00217 26266
[View Peptides]   GVP36 BAR domain-containing protein that localizes to both early and late Golgi vesicles; required for ada... 7 9 42.9% 5.33E-4 36670
[View Peptides]   SUI3 Beta subunit of the translation initiation factor eIF2, involved in the identification of the start ... 12 28 42.5% 0.0019 31574
[View Peptides]   RPB11 RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit 6 14 42.5% 0.00225 13616
[View Peptides]   RPB5 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects tra... 6 42 42.3% 0.00377 25079
[View Peptides]   KAP95 Karyopherin beta, forms a complex with Srp1p/Kap60p; interacts with nucleoporins to mediate nuclear ... 23 70 42.0% 0.00157 94776
[View Peptides]   ZUO1 Cytosolic ribosome-associated chaperone that acts, together with Ssz1p and the Ssb proteins, as a ch... 15 120 41.8% 0.00535 49020
[View Peptides]   RPC82 RNA polymerase III subunit C82 20 45 41.6% 0.00133 74017
[View Peptides]   MET12 Protein with methylenetetrahydrofolate reductase (MTHFR) activity in vitro; null mutant has no pheno... 14 50 41.6% 0.00147 73942
[View Peptides]   gi|14488811, gi|... gi|178847521|pdb|3BDM|T Chain T, Yeast 20s Proteasome:glidobactin A-Complex, gi|178847507|pdb|3BDM|F... 16 98 41.5% 0.00659 31405
[View Peptides]   SNU13 RNA binding protein, part of U3 snoRNP involved in rRNA processing, part of U4/U6-U5 tri-snRNP invol... 3 5 41.3% 7.66E-4 13569
[View Peptides]   RPN13 Subunit of the 19S regulatory particle of the 26S proteasome lid; acts as a ubiquitin receptor for t... 3 7 41.0% 8.66E-4 17902
[View Peptides]   MTC1 Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion... 16 38 40.4% 0.00153 53477
[View Peptides]   HCR1 Dual function protein involved in translation initiation as a substoichiometric component (eIF3j) of... 13 19 40.4% 0.00138 29564
[View Peptides]   GCD11 Gamma subunit of the translation initiation factor eIF2, involved in the identification of the start... 24 123 40.2% 0.0045 57866
[View Peptides]   HS71_YEAST, HSP7... (P10591) Heat shock protein SSA1 (Heat shock protein YG100), (P10591) Heat shock protein SSA1 (Heat ... 19 41 40.1% 0.00123 69526
[View Peptides]   HSP72_YEAST, HS7... (P10592) Heat shock protein SSA2, (P10592) Heat shock protein SSA2 21 47 40.1% 0.00142 69339
[View Peptides]   GLC7 Type 1 serine/threonine protein phosphatase catalytic subunit, involved in many processes (eg: glyco... 8 10 40.1% 6.18E-4 35907
[View Peptides]   RPT2 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 13 33 39.8% 0.00146 48828
[View Peptides]   YBR137W Protein of unknown function; localized to the cytoplasm; binds to Replication Protein A (RPA); YBR13... 9 40 39.7% 0.00431 20454
[View Peptides]   RPO26 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III; part of central core; simila... 5 7 39.4% 8.71E-4 17910
[View Peptides]   gi|464861, gi|45... gi|464861|sp|P33298.1|PRS6B_YEAST RecName: Full=26S protease regulatory subunit 6B homolog; AltName:... 12 38 39.0% 0.00171 47970
[View Peptides]   NMA1 Nicotinic acid mononucleotide adenylyltransferase, involved in pathways of NAD biosynthesis, includi... 11 48 38.9% 0.00231 45859
[View Peptides]   CB34_YEAST, SKP1... (P52286) Suppressor of kinetochore protein 1 (Centromere DNA-binding protein complex CBF3 subunit D)... 7 58 38.9% 0.0058 22199
[View Peptides]   CHZ1 Histone chaperone for Htz1p/H2A-H2B dimer; required for the stabilization of the Chz1p-Htz1-H2B comp... 3 3 38.8% 3.62E-4 18306
[View Peptides]   CMD1 Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, act... 2 2 38.8% 2.63E-4 16135
[View Peptides]   CEG1 Alpha (guanylyltransferase) subunit of the mRNA capping enzyme, a heterodimer (the other subunit is ... 13 45 38.6% 0.00189 52764
[View Peptides]   RPO21 RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapep... 53 287 38.5% 0.0032 191610
[View Peptides]   RPO31 RNA polymerase III largest subunit C160, part of core enzyme; similar to bacterial beta-prime subuni... 42 149 38.4% 0.00197 162301
[View Peptides]   CKB2 Beta' regulatory subunit of casein kinase 2, a Ser/Thr protein kinase with roles in cell growth and ... 8 9 38.4% 6.73E-4 29842
[View Peptides]   DPH5 Methyltransferase required for synthesis of diphthamide, which is a modified histidine residue of tr... 11 38 38.0% 0.00244 33847
[View Peptides]   SRP14 Signal recognition particle (SRP) subunit, interacts with the RNA component of SRP to form the Alu d... 3 5 37.7% 6.61E-4 16430
[View Peptides]   HGH1 Nonessential protein of unknown function; predicted to be involved in ribosome biogenesis; green flu... 8 167 37.3% 0.00818 44952
[View Peptides]   DCP2 Catalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex, which removes the 5' cap structure fr... 27 126 36.9% 0.00251 108667
[View Peptides]   RPC11 RNA polymerase III subunit C11; mediates pol III RNA cleavage activity and is important for terminat... 2 2 36.4% 3.51E-4 12513
[View Peptides]   SPT6 Transcription elongation factor required for the maintenance of chromatin structure during transcrip... 51 125 36.3% 0.00166 168291
[View Peptides]   SDS22 Conserved nuclear regulatory subunit of Glc7p type 1 protein serine-threonine phosphatase (PP1), fun... 7 9 36.1% 5.14E-4 38887
[View Peptides]   RPC40 RNA polymerase subunit AC40, common to RNA polymerase I and III 9 15 36.1% 8.64E-4 37687
[View Peptides]   RVB1 Essential protein involved in transcription regulation; component of chromatin remodeling complexes;... 13 23 35.9% 9.58E-4 50453
[View Peptides]   POP3 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor... 3 5 35.9% 4.95E-4 22612
[View Peptides]   ENP1 Protein associated with U3 and U14 snoRNAs, required for pre-rRNA processing and 40S ribosomal subun... 12 19 35.8% 7.59E-4 55137
[View Peptides]   RVB2 Essential protein involved in transcription regulation; component of chromatin remodeling complexes;... 11 34 35.5% 0.00139 51612
[View Peptides]   gi|173126, gi|136683 gi|173126|gb|AAA35189.1| ubiquitin-specific processing protease I [Saccharomyces cerevisiae], gi|136... 20 51 35.4% 0.00122 92753
[View Peptides]   SDC1 Subunit of the COMPASS (Set1C) complex, which methylates lysine 4 of histone H3 and is required in c... 3 4 35.4% 4.41E-4 19446
[View Peptides]   MSH2 Protein that forms heterodimers with Msh3p and Msh6p that bind to DNA mismatches to initiate the mis... 22 48 35.2% 9.61E-4 108884
[View Peptides]   COPD_YEAST (P43621) Coatomer subunit delta (Delta-coat protein) (Delta-COP) 21 48 34.9% 0.0017 60497
[View Peptides]   CCT7 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 11 16 34.2% 5.61E-4 59736
[View Peptides]   gi|731632, gi|62... gi|731632|sp|P38758|YHG9_YEAST Hypothetical 57.0 kDa protein in SOD2-RPL27A intergenic region, pir||... 12 18 34.2% 6.7E-4 57034
[View Peptides]   LSB5 Protein of unknown function; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome prot... 10 60 34.2% 0.00327 39872
[View Peptides]   AB140_YEAST, ABP... (Q08641) Actin-binding protein ABP140, (Q08641) Actin-binding protein ABP140 19 40 34.0% 0.00123 71355
[View Peptides]   OCA1 Putative protein tyrosine phosphatase, required for cell cycle arrest in response to oxidative damag... 6 54 34.0% 0.00438 27205
[View Peptides]   RET1 Second-largest subunit of RNA polymerase III, which is responsible for the transcription of tRNA and... 28 45 33.6% 7.56E-4 129456
[View Peptides]   PDI1 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen, es... 13 41 33.1% 0.00152 58227
[View Peptides]   PTC1 Type 2C protein phosphatase (PP2C); inactivates the osmosensing MAPK cascade by dephosphorylating Ho... 5 27 33.1% 0.00185 31550
[View Peptides]   RPB9 RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site selection a... 3 8 32.8% 0.00127 14288
[View Peptides]   ELP3 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; exhi... 13 24 32.7% 8.31E-4 63657
[View Peptides]   TIF5 Translation initiation factor eIF-5; N-terminal domain functions as a GTPase-activating protein to m... 7 23 32.6% 0.0011 45261
[View Peptides]   SNF1 AMP-activated serine/threonine protein kinase found in a complex containing Snf4p and members of the... 14 19 32.4% 5.79E-4 72045
[View Peptides]   UTP8 Nucleolar protein required for export of tRNAs from the nucleus; also copurifies with the small subu... 14 20 32.3% 5.41E-4 80191
[View Peptides]   UTP9 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ... 9 14 32.2% 4.7E-4 65272
[View Peptides]   SRP1 Karyopherin alpha homolog, forms a dimer with karyopherin beta Kap95p to mediate import of nuclear p... 15 41 31.9% 0.00146 60441
[View Peptides]   RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8 8 11 31.8% 6.3E-4 38181
[View Peptides]   KAR2 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i... 17 59 31.7% 0.00167 74468
[View Peptides]   NUP2 Nucleoporin involved in nucleocytoplasmic transport, binds to either the nucleoplasmic or cytoplasmi... 15 23 31.5% 6.16E-4 77881
[View Peptides]   RPB8 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III 3 18 31.5% 0.00238 16511
[View Peptides]   TFA1 TFIIE large subunit, involved in recruitment of RNA polymerase II to the promoter, activation of TFI... 11 16 31.3% 6.4E-4 54742
[View Peptides]   CCT4 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 9 11 31.2% 4.02E-4 57604
[View Peptides]   YOL098C Putative metalloprotease 18 45 30.8% 8.37E-4 118392
[View Peptides]   NAP1 Protein that interacts with mitotic cyclin Clb2p; required for the regulation of microtubule dynamic... 8 16 30.7% 7.4E-4 47885
[View Peptides]   RXT3 Subunit of the RPD3L complex; involved in histone deacetylation 3 5 30.6% 3.28E-4 33812
[View Peptides]   CCT8 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 12 22 30.5% 7.47E-4 61662
[View Peptides]   UTP15 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ... 8 16 30.4% 6.02E-4 57686
[View Peptides]   ARG82 Inositol polyphosphate multikinase (IPMK), sequentially phosphorylates Ins(1,4,5)P3 to form Ins(1,3,... 8 16 30.4% 8.7E-4 40353
[View Peptides]   RIM1 Single-stranded DNA-binding protein essential for mitochondrial genome maintenance; involved in mito... 2 3 30.4% 4.29E-4 15386
[View Peptides]   SPT5 Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a compl... 25 50 30.3% 9.08E-4 115650
[View Peptides]   ARP8 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en... 18 45 30.3% 9.86E-4 100209
[View Peptides]   RPC34 RNA polymerase III subunit C34; interacts with TFIIIB70 and is a key determinant in pol III recruitm... 7 20 30.3% 0.00122 36135
[View Peptides]   PUP1 Beta 2 subunit of the 20S proteasome; endopeptidase with trypsin-like activity that cleaves after ba... 5 65 30.3% 0.00481 28268
[View Peptides]   TOA2 TFIIA small subunit; involved in transcriptional activation, acts as antirepressor or as coactivator... 2 11 30.3% 0.00174 13458
[View Peptides]   UTP5 Subunit of U3-containing Small Subunit (SSU) processome complex involved in production of 18S rRNA a... 9 11 30.2% 3.3E-4 72002
[View Peptides]   AIM7 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 2 2 30.2% 2.59E-4 17130
[View Peptides]   YGR237C Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 13 13 30.1% 3.2E-4 89241
[View Peptides]   SRP68 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex that functio... 14 25 30.1% 8.05E-4 69006
[View Peptides]   gi|1732237, gi|2... sp|P89105|CTR9_YEAST CTR9 protein, gi|1732237|gb|AAB38704.1| CTR9 [Saccharomyces cerevisiae] 26 87 29.9% 0.00156 124751
[View Peptides]   YGL242C Putative protein of unknown function; deletion mutant is viable 6 16 29.8% 0.00171 20074
[View Peptides]   RPT1 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 11 43 29.6% 0.00178 51983
[View Peptides]   NIP7 Nucleolar protein required for 60S ribosome subunit biogenesis, constituent of 66S pre-ribosomal par... 3 3 29.3% 3.2E-4 20381
[View Peptides]   YGR017W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to bo... 4 13 29.0% 8.45E-4 34679
[View Peptides]   gi|3121838, gi|2... gi|3121838|sp|O13297.1|CET1_YEAST RecName: Full=mRNA-capping enzyme subunit beta; AltName: Full=Poly... 15 32 28.8% 0.00112 61822
[View Peptides]   RPT4 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 9 13 28.8% 5.74E-4 49408
[View Peptides]   IES3 Subunit of the INO80 chromatin remodeling complex 3 4 28.8% 3.09E-4 28243
[View Peptides]   LTV1 Component of the GSE complex, which is required for proper sorting of amino acid permease Gap1p; req... 9 32 28.5% 0.00133 53390
[View Peptides]   FCP1 Carboxy-terminal domain (CTD) phosphatase, essential for dephosphorylation of the repeated C-termina... 11 18 28.4% 4.74E-4 83441
[View Peptides]   VPS75 NAP family histone chaperone; binds to histones and Rtt109p, stimulating histone acetyltransferase a... 4 9 28.4% 6.58E-4 30615
[View Peptides]   FAP7 Essential NTPase required for small ribosome subunit synthesis, mediates processing of the 20S pre-r... 5 6 28.4% 5.88E-4 22723
[View Peptides]   SWH1 Protein similar to mammalian oxysterol-binding protein; contains ankyrin repeats; localizes to the G... 27 38 28.1% 6.17E-4 135070
[View Peptides]   AML1 Putative protein of unknown function with similarity to methyltransferase family members; green fluo... 6 31 28.0% 0.0031 22153
[View Peptides]   ELP2 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; targ... 17 32 27.9% 7.84E-4 89410
[View Peptides]   DPB4 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex; in... 4 6 27.6% 5.91E-4 21997
[View Peptides]   PAH1 Mg<sup>2+</sup>-dependent phosphatidate (PA) phosphatase, catalyzes the dephosphorylation of PA to y... 11 13 27.5% 2.91E-4 95031
[View Peptides]   TIF11 Translation initiation factor eIF1A, essential protein that forms a complex with Sui1p (eIF1) and th... 3 67 27.5% 0.00845 17435
[View Peptides]   DRE2 Protein that may prevent apoptosis by forming a complex with Tah18p in the absence of stress; requir... 8 17 27.3% 9.43E-4 38543
[View Peptides]   MCM2 Protein involved in DNA replication; component of the Mcm2-7 hexameric complex that binds chromatin ... 16 29 27.2% 6.45E-4 98779
[View Peptides]   gi|2326846 gi|2326846|emb|CAA97990.1| unnamed protein product [Saccharomyces cerevisiae] 3 5 27.1% 3.35E-4 32759
[View Peptides]   TOP2 Essential type II topoisomerase, relieves torsional strain in DNA by cleaving and re-sealing the pho... 28 82 27.0% 0.00111 164214
[View Peptides]   RPT6 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 9 13 26.9% 6.19E-4 45272
[View Peptides]   CTF4_YEAST (Q01454) DNA polymerase alpha-binding protein (Protein CTF4) (Protein POB1) (Chromosome replication ... 15 37 26.5% 7.71E-4 104293
[View Peptides]   AKL1 Ser-Thr protein kinase, member (with Ark1p and Prk1p) of the Ark kinase family; involved in endocyto... 15 15 26.4% 2.61E-4 123989
[View Peptides]   GRX1 Hydroperoxide and superoxide-radical responsive heat-stable glutathione-dependent disulfide oxidored... 2 2 26.4% 3.51E-4 12380
[View Peptides]   THO2 Subunit of the THO complex, which is required for efficient transcription elongation and involved in... 28 72 26.3% 8.7E-4 183930
[View Peptides]   UBP12 Ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific protease present in the nucleus and cytopl... 23 25 26.3% 3.85E-4 143192
[View Peptides]   NUP60 Subunit of the nuclear pore complex (NPC), functions to anchor Nup2p to the NPC in a process control... 7 10 26.3% 3.58E-4 59039
[View Peptides]   TPS1 Synthase subunit of trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storag... 6 11 26.1% 4.29E-4 56148
[View Peptides]   SRP54 Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence... 10 27 25.7% 9.63E-4 59624
[View Peptides]   MDN1 Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex... 88 173 25.4% 6.8E-4 559316
[View Peptides]   YPL260W Putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion pr... 6 12 25.4% 4.2E-4 62780
[View Peptides]   BBC1 Protein possibly involved in assembly of actin patches; interacts with an actin assembly factor Las1... 20 37 25.0% 6.17E-4 128296
[View Peptides]   RPC53 RNA polymerase III subunit C53 8 19 24.6% 8.69E-4 46667
[View Peptides]   gi|133003, gi|17... gi|173235|gb|AAA35236.1| 5S ribosomal RNA binding-protein [Saccharomyces cerevisiae], gi|173232|gb|A... 3 4 24.6% 2.6E-4 33743
[View Peptides]   RPD3 Histone deacetylase; regulates transcription and silencing; plays a role in regulating Ty1 transposi... 7 7 24.5% 3.12E-4 48904
[View Peptides]   PEA2 Coiled-coil polarisome protein required for polarized morphogenesis, cell fusion, and low affinity C... 9 9 24.5% 4.13E-4 48165
[View Peptides]   RPC25 RNA polymerase III subunit C25, required for transcription initiation; forms a heterodimer with Rpc1... 3 6 24.5% 5.46E-4 24326
[View Peptides]   NUP159 Nucleoporin, subunit of the nuclear pore complex that is found exclusively on the cytoplasmic side, ... 16 24 24.4% 3.17E-4 158907
[View Peptides]   gi|1903280 gi|1903280|emb|CAA98620.1| USO1 [Saccharomyces cerevisiae] 26 39 24.4% 5.93E-4 147463
[View Peptides]   NOP2 Probable RNA m(5)C methyltransferase, essential for processing and maturation of 27S pre-rRNA and la... 12 14 24.4% 4.37E-4 69812
[View Peptides]   RKM3 Ribosomal lysine methyltransferase specific for monomethylation of Rpl42ap and Rpl42bp (lysine 40); ... 7 9 24.3% 3.15E-4 62594
[View Peptides]   RPN5 Essential, non-ATPase regulatory subunit of the 26S proteasome lid, similar to mammalian p55 subunit... 7 11 24.3% 4.77E-4 51769
[View Peptides]   UME1 Negative regulator of meiosis, required for repression of a subset of meiotic genes during vegetativ... 6 6 24.3% 2.52E-4 51022
[View Peptides]   NBP2 Protein involved in the HOG (high osmolarity glycerol) pathway, negatively regulates Hog1p by recrui... 4 7 24.2% 5.72E-4 26571
[View Peptides]   SRP21_YEAST, SR2... (P32342) Signal recognition particle subunit SRP21 (Signal recognition particle 21 kDa protein), (P3... 4 11 24.1% 0.00128 18294
[View Peptides]   KC22_YEAST, CSK2... (P19454) Casein kinase II, alpha' chain (CK II) (EC 2.7.1.37), (P19454) Casein kinase II subunit alp... 7 9 24.0% 5.14E-4 39272
[View Peptides]   gi|2507200, gi|7... gi|733594|gb|AAA64421.1| CaM kinase-like protein kinase, gi|2507200|sp|P38623.2|RCK2_YEAST RecName: ... 15 24 23.9% 7.59E-4 68041
[View Peptides]   RRP9 Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subu... 9 11 23.9% 3.7E-4 65054
[View Peptides]   LEO1 Component of the Paf1 complex, which associates with RNA polymerase II and is involved in histone me... 7 11 23.9% 4.57E-4 53920
[View Peptides]   CHD1 Nucleosome remodeling factor that functions in regulation of transcription elongation; contains a ch... 29 48 23.6% 6.31E-4 168240
[View Peptides]   SPA2 Component of the polarisome, which functions in actin cytoskeletal organization during polarized gro... 24 35 23.2% 4.61E-4 163142
[View Peptides]   UFD4 Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p, two subunits of the 19S particle ... 18 28 23.1% 3.64E-4 167842
[View Peptides]   RPN6 Essential, non-ATPase regulatory subunit of the 26S proteasome lid required for the assembly and act... 8 14 23.0% 6.22E-4 49774
[View Peptides]   RPN2_YEAST (P32565) 26S proteasome regulatory subunit RPN2 16 83 22.9% 0.0017 104101
[View Peptides]   TAF6 Subunit (60 kDa) of TFIID and SAGA complexes, involved in transcription initiation of RNA polymerase... 5 5 22.9% 1.87E-4 57902
[View Peptides]   MET18 DNA repair and TFIIH regulator, required for both nucleotide excision repair (NER) and RNA polymeras... 15 28 22.8% 5.24E-4 117882
[View Peptides]   UBX5 UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p 10 19 22.8% 7.33E-4 56737
[View Peptides]   YLR287C Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 7 41 22.8% 0.00223 40928
[View Peptides]   YKE2 Subunit of the heterohexameric Gim/prefoldin protein complex involved in the folding of alpha-tubuli... 2 4 22.8% 6.77E-4 13284
[View Peptides]   PLP2 Essential protein that interacts with the CCT (chaperonin containing TCP-1) complex to stimulate act... 3 4 22.7% 2.7E-4 32793
[View Peptides]   MAM33 Acidic protein of the mitochondrial matrix involved in oxidative phosphorylation; related to the hum... 4 17 22.6% 0.00123 30132
[View Peptides]   RPC17 RNA polymerase III subunit C17; physically interacts with C31, C11, and TFIIIB70; may be involved in... 2 3 22.4% 3.6E-4 18610
[View Peptides]   RLF2 Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1) with Cac2p and Msi1p that assembles ... 8 8 22.3% 2.55E-4 70210
[View Peptides]   MSI1 Subunit of chromatin assembly factor I (CAF-1), negative regulator of the RAS/cAMP pathway via seque... 4 11 22.3% 5.03E-4 47365
[View Peptides]   PAF1 Component of the Paf1p complex that binds to and modulates the activity of RNA polymerases I and II;... 9 13 22.0% 5.64E-4 51801
[View Peptides]   MFT1 Subunit of the THO complex, which is a nuclear complex comprised of Hpr1p, Mft1p, Rlr1p, and Thp2p, ... 5 6 21.9% 2.95E-4 44996
[View Peptides]   TOA1 TFIIA large subunit; involved in transcriptional activation, acts as antirepressor or as coactivator... 4 4 21.7% 2.7E-4 32201
[View Peptides]   TAF5 Subunit (90 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation... 10 14 21.6% 3.39E-4 88968
[View Peptides]   TAF8 TFIID subunit (65 kDa), involved in RNA polymerase II transcription initiation 7 10 21.6% 3.78E-4 57986
[View Peptides]   RPN9 Non-ATPase regulatory subunit of the 26S proteasome, has similarity to putative proteasomal subunits... 6 7 21.6% 3.44E-4 45783
[View Peptides]   SRP72 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex that functio... 11 19 21.5% 5.67E-4 74273
[View Peptides]   DMA1 Protein involved in ubiquitin ligation; plays a role in regulating spindle position and orientation;... 7 10 21.4% 4.64E-4 46098
[View Peptides]   TSR3 Protein required for correct processing of the 20S pre-rRNA at site D to generate mature 18S rRNA; g... 4 4 21.4% 2.47E-4 35686
[View Peptides]   RS3_YEAST (P05750) 40S ribosomal protein S3 (YS3) (RP13) 5 97 21.3% 0.00783 26372
[View Peptides]   FUN30 Protein whose overexpression affects chromosome stability, potential Cdc28p substrate; homolog of Sn... 16 20 21.2% 3.41E-4 128507
[View Peptides]   GYS2_YEAST (P27472) Glycogen [starch] synthase isoform 2 (EC 2.4.1.11) 11 18 21.2% 4.93E-4 79948
[View Peptides]   MSH6 Protein required for mismatch repair in mitosis and meiosis, forms a complex with Msh2p to repair bo... 16 26 20.9% 4.04E-4 140080
[View Peptides]   CRP1 Protein that binds to cruciform DNA structures 6 7 20.9% 2.9E-4 51116
[View Peptides]   CKB1 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase with roles in cell growth and p... 3 4 20.9% 2.78E-4 32265
[View Peptides]   SSN2 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 12 15 20.8% 2.04E-4 160000
[View Peptides]   ENP2 Essential nucleolar protein, required for biogenesis of the small ribosomal subunit; contains WD rep... 8 14 20.8% 3.82E-4 81748
[View Peptides]   CDC123 Protein involved in nutritional control of the cell cycle; regulates abundance of the translation in... 4 5 20.8% 2.68E-4 41852
[View Peptides]   gi|1351133, gi|1... gi|1351133|sp|P40016|RPN3_YEAST 26S proteasome regulatory subunit RPN3, gi|134047880|sp|P40016.4|RPN... 10 22 20.7% 8.12E-4 60423
[View Peptides]   YOR352W Putative protein of unknown function; expression levels regulated by Arg5,6p; green fluorescent prot... 4 5 20.7% 2.81E-4 39275
[View Peptides]   COG2 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tet... 2 2 20.7% 1.4E-4 31800
[View Peptides]   UTP13 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ... 8 13 20.6% 3.07E-4 91032
[View Peptides]   PSY4 Putative regulatory subunit of an evolutionarily conserved protein phosphatase; localization is cell... 5 7 20.6% 3.06E-4 50655
[View Peptides]   NMA2 Nicotinic acid mononucleotide adenylyltransferase, involved in de novo and salvage synthesis of NAD(... 5 5 20.5% 2.44E-4 44909
[View Peptides]   DIP2 Nucleolar protein, specifically associated with the U3 snoRNA, part of the large ribonucleoprotein c... 14 32 20.4% 6.55E-4 106342
[View Peptides]   CDC73 Component of the Paf1p complex that binds to and modulates the activity of RNA polymerases I and II;... 6 7 20.4% 3.44E-4 44456
[View Peptides]   CBF5 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (s... 7 15 20.3% 5.99E-4 54705
[View Peptides]   BMH1_YEAST (P29311) Protein BMH1 4 5 20.3% 3.63E-4 29960
[View Peptides]   SHP1 UBX (ubiquitin regulatory X) domain-containing protein that regulates Glc7p phosphatase activity and... 5 5 20.1% 2.28E-4 46987
[View Peptides]   LAA1 AP-1 accessory protein; colocalizes with clathrin to the late-Golgi apparatus; involved in TGN-endos... 21 62 19.8% 5.94E-4 229898
[View Peptides]   HPR1 Subunit of THO/TREX complexes that couple transcription elongation with mitotic recombination and wi... 11 17 19.8% 4.36E-4 87829
[View Peptides]   SPT8 Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SAL... 9 9 19.4% 2.88E-4 66190
[View Peptides]   HSP33 Possible chaperone and cysteine protease with similarity to E. coli Hsp31 and S. cerevisiae Hsp31p, ... 2 2 19.4% 1.63E-4 25926
[View Peptides]   SGF29 Probable subunit of SAGA histone acetyltransferase complex 3 3 19.3% 2.23E-4 29381
[View Peptides]   FUN12 GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes a... 15 29 19.2% 5.58E-4 112268
[View Peptides]   BRE2 Subunit of COMPASS (Set1C) complex, which methylates Lys4 of histone H3 and functions in silencing a... 6 7 19.2% 2.67E-4 58348
[View Peptides]   SEC13 Component of both the Nup84 nuclear pore sub-complex and the Sec13p-Sec31p complex of the COPII vesi... 6 6 19.2% 3.9E-4 33043
[View Peptides]   RPC37 RNA polymerase III subunit C37 5 28 19.1% 0.00192 32142
[View Peptides]   HBS1 GTP binding protein with sequence similarity to the elongation factor class of G proteins, EF-1alpha... 13 21 19.0% 6.63E-4 68730
[View Peptides]   TEX1 Protein involved in mRNA export, component of the transcription export (TREX) complex 5 7 19.0% 3.2E-4 47167
[View Peptides]   UTP25 Nucleolar protein that cosediments with the 40S ribosomal subunit and is required for its biogenesis... 9 10 18.9% 2.68E-4 83991
[View Peptides]   TSR2 Protein with a potential role in pre-rRNA processing 5 15 18.9% 0.00116 29003
[View Peptides]   TPS2 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the... 7 7 18.8% 1.51E-4 102976
[View Peptides]   THP2 Subunit of the THO complex, which connects transcription elongation and mitotic recombination, and o... 4 6 18.8% 4.44E-4 30299
[View Peptides]   OCA2 Putative protein with similarity to predicted tyrosine phosphatases Oca1p and Siw14p; green fluoresc... 2 2 18.8% 1.96E-4 22472
[View Peptides]   UBP8 Ubiquitin-specific protease that is a component of the SAGA (Spt-Ada-Gcn5-Acetyltransferase) acetyla... 7 9 18.7% 3.69E-4 53623
[View Peptides]   ACT1 Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functio... 4 4 18.7% 2.06E-4 41690
[View Peptides]   RRP1 Essential evolutionarily conserved nucleolar protein necessary for biogenesis of 60S ribosomal subun... 7 41 18.7% 0.00285 33203
[View Peptides]   YRB30 RanGTP-binding protein, inhibits RanGAP1 (Rna1p)-mediated GTP hydrolysis of RanGTP (Gsp1p); shares s... 6 10 18.6% 4.39E-4 50296
[View Peptides]   TCP1 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol; inv... 5 12 18.4% 4.14E-4 60481
[View Peptides]   HSM3 Proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasoma... 6 10 18.3% 4.02E-4 55543
[View Peptides]   RPN11 Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiq... 4 7 18.3% 4.41E-4 34398
[View Peptides]   gi|2498507, gi|1... gi|2498507|sp|Q92325|LAG2_YEAST Longevity-assurance protein 2, gi|1616989|gb|AAB16890.1| Lag2p 7 10 18.2% 2.84E-4 77541
[View Peptides]   PSY2 Putative subunit of an evolutionarily conserved protein phosphatase complex containing the catalytic... 8 22 18.1% 4.95E-4 98053
[View Peptides]   SIW14 Tyrosine phosphatase that plays a role in actin filament organization and endocytosis; localized to ... 4 5 18.1% 3.43E-4 32755
[View Peptides]   gi|1174562, gi|6... gi|607956|gb|AAA62664.1| transcription factor TFIIE, small subunit, gi|1174562|sp|P36145.2|T2EB_YEAS... 7 8 18.0% 4.71E-4 37054
[View Peptides]   CDC34 Ubiquitin-conjugating enzyme (E2) and catalytic subunit of SCF ubiquitin-protein ligase complex (tog... 5 6 18.0% 3.92E-4 34065
[View Peptides]   MET13 Major isozyme of methylenetetrahydrofolate reductase, catalyzes the reduction of 5,10-methylenetetra... 7 8 17.9% 2.58E-4 68472
[View Peptides]   SAP30 Subunit of a histone deacetylase complex, along with Rpd3p and Sin3p, that is involved in silencing ... 2 2 17.9% 1.92E-4 23026
[View Peptides]   DUF1 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 10 13 17.8% 2.25E-4 125382
[View Peptides]   NHP10 Protein related to mammalian high mobility group proteins; preferentially binds DNA ends, protecting... 2 2 17.7% 1.9E-4 23857
[View Peptides]   HFI1 Adaptor protein required for structural integrity of the SAGA complex, a histone acetyltransferase-c... 5 6 17.6% 2.37E-4 54466
[View Peptides]   RTN1 ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subu... 3 3 17.6% 1.96E-4 32916
[View Peptides]   SPT20 Subunit of the SAGA transcriptional regulatory complex, involved in maintaining the integrity of the... 5 9 17.5% 2.88E-4 67797
[View Peptides]   YMR258C Protein of unknown function with similarity to F-box proteins; physically interacts with Skp1p; gree... 6 11 17.5% 3.84E-4 64405
[View Peptides]   NSP1 Essential component of the nuclear pore complex, which mediates nuclear import and export, found in ... 5 14 17.4% 3.28E-4 86516
[View Peptides]   IES1 Subunit of the INO80 chromatin remodeling complex 6 9 17.3% 2.51E-4 78753
[View Peptides]   BUD21 Component of small ribosomal subunit (SSU) processosome that contains U3 snoRNA; originally isolated... 2 6 17.3% 5.41E-4 24385
[View Peptides]   SEC16 COPII vesicle coat protein required for ER transport vesicle budding; Sec16p is bound to the periphe... 19 24 17.1% 2.11E-4 241694
[View Peptides]   SKY1 SR protein kinase (SRPK) involved in regulating proteins involved in mRNA metabolism and cation home... 8 14 17.1% 3.64E-4 83238
[View Peptides]   NOP56 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that ... 4 4 17.1% 1.53E-4 56864
[View Peptides]   NBP1 Spindle pole body (SPB) component, required for the insertion of the duplication plaque into the nuc... 2 2 16.9% 1.21E-4 37354
[View Peptides]   HSH155 U2-snRNP associated splicing factor that forms extensive associations with the branch site-3' splice... 9 9 16.7% 1.79E-4 110028
[View Peptides]   GYS1_YEAST (P23337) Glycogen [starch] synthase isoform 1 (EC 2.4.1.11) 7 9 16.7% 2.46E-4 80379
[View Peptides]   RTG2 Sensor of mitochondrial dysfunction; regulates the subcellular location of Rtg1p and Rtg3p, transcri... 6 8 16.7% 2.63E-4 65572
[View Peptides]   SLG1 Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway involved in maintenance of cell w... 3 3 16.7% 1.53E-4 39270
[View Peptides]   LEU3 Zinc-finger transcription factor that regulates genes involved in branched chain amino acid biosynth... 7 15 16.6% 3.27E-4 100153
[View Peptides]   VPS33 ATP-binding protein that is a subunit of the HOPS complex and of the CORVET tethering complex; essen... 7 11 16.6% 3.07E-4 79271
[View Peptides]   PPH3 Catalytic subunit of an evolutionarily conserved protein phosphatase complex containing Psy2p and th... 2 2 16.6% 1.25E-4 35264
[View Peptides]   SAP190 Protein that forms a complex with the Sit4p protein phosphatase and is required for its function; me... 9 10 16.5% 1.87E-4 117098
[View Peptides]   POP1 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor... 9 14 16.5% 3.09E-4 100395
[View Peptides]   SDS23 One of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implic... 6 7 16.5% 2.56E-4 58112
[View Peptides]   PRS1 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot... 3 3 16.4% 1.36E-4 47048
[View Peptides]   NRG2 Transcriptional repressor that mediates glucose repression and negatively regulates filamentous grow... 2 2 16.4% 1.75E-4 25009
[View Peptides]   PEP5 Component of CORVET tethering complex; peripheral vacuolar membrane protein required for protein tra... 11 18 16.3% 3.38E-4 117477
[View Peptides]   TFC7 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part... 3 4 16.3% 1.77E-4 49146
[View Peptides]   END3 EH domain-containing protein involved in endocytosis, actin cytoskeletal organization and cell wall ... 5 6 16.3% 3.32E-4 40297
[View Peptides]   HSP76_YEAST, HS7... (P40150) Heat shock protein SSB2, (P40150) Heat shock protein SSB2 11 16 16.0% 5.04E-4 66463
[View Peptides]   HS75_YEAST, HSP7... (P11484) Heat shock protein SSB1 (Cold-inducible protein YG101), (P11484) Heat shock protein SSB1 (C... 11 16 16.0% 5.04E-4 66470
[View Peptides]   RPA43 RNA polymerase I subunit A43 2 2 16.0% 1.18E-4 36224
[View Peptides]   UBP2 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins; interacts with Rsp5p... 10 18 15.8% 2.73E-4 146354
[View Peptides]   LSB1 Protein containing an N-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldri... 2 2 15.8% 1.6E-4 26139
[View Peptides]   UTP10 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ... 18 44 15.7% 4.8E-4 200080
[View Peptides]   EDE1 Key endocytic protein involved in a network of interactions with other endocytic proteins, binds mem... 13 18 15.7% 2.51E-4 150783
[View Peptides]   UTP21 Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in pr... 10 15 15.7% 3.08E-4 104791
[View Peptides]   MAK5 Essential nucleolar protein, putative DEAD-box RNA helicase required for maintenance of M1 dsRNA vir... 8 10 15.7% 2.5E-4 87048
[View Peptides]   RTT103 Protein that interacts with exonuclease Rat1p and Rai1p and plays a role in transcription terminatio... 5 32 15.6% 0.00151 46488
[View Peptides]   TPM1 Major isoform of tropomyosin; binds to and stabilizes actin cables and filaments, which direct polar... 2 2 15.6% 1.94E-4 23541
[View Peptides]   SPT7 Subunit of the SAGA transcriptional regulatory complex, involved in proper assembly of the complex; ... 10 12 15.5% 1.74E-4 152617
[View Peptides]   gi|1870111 gi|1870111|emb|CAA85110.1| unnamed protein product [Saccharomyces cerevisiae] 2 2 15.5% 1.07E-4 41583
[View Peptides]   ESF2 Essential nucleolar protein involved in pre-18S rRNA processing; binds to RNA and stimulates ATPase ... 5 6 15.5% 3.66E-4 36408
[View Peptides]   DOC1 Processivity factor required for the ubiquitination activity of the anaphase promoting complex (APC)... 2 2 15.5% 1.36E-4 32822
[View Peptides]   APL4 Gamma-adaptin, large subunit of the clathrin-associated protein (AP-1) complex; binds clathrin; invo... 11 21 15.3% 4.87E-4 93624
[View Peptides]   gi|2131088, gi|2... sp|P39531|YJU4_YEAST Hypothetical 75.9 kDa protein in NCE1-PRP21 intergenic region, gi|2131088|emb|C... 7 20 15.3% 5.91E-4 75856
[View Peptides]   YOR051C Nuclear protein that inhibits replication of Brome mosaic virus in S. cerevisiae, which is a model s... 3 6 15.3% 2.81E-4 47352
[View Peptides]   CUE5 Protein containing a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiqui... 2 2 15.1% 9.39E-5 46870
[View Peptides]   CCT6 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, essential protein that is re... 4 9 15.0% 3.18E-4 59924
[View Peptides]   PIR1 O-glycosylated protein required for cell wall stability; attached to the cell wall via beta-1,3-gluc... 2 3 15.0% 1.7E-4 34622
[View Peptides]   PEX18 Peroxin required for targeting of peroxisomal matrix proteins containing PTS2; interacts with Pex7p;... 2 2 14.8% 1.36E-4 32037
[View Peptides]   ARP4 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en... 5 7 14.7% 2.76E-4 54832
[View Peptides]   BMH2_YEAST (P34730) Protein BMH2 3 3 14.7% 2.13E-4 30930
[View Peptides]   YLR243W Putative protein of unknown function; YLR243W is an essential gene 3 3 14.7% 2.13E-4 30653
[View Peptides]   PAA1 Polyamine acetyltransferase; acetylates polyamines (e.g. putrescine, spermidine, spermine) and also ... 2 2 14.7% 2.02E-4 21947
[View Peptides]   RPN12 Subunit of the 19S regulatory particle of the 26S proteasome lid; synthetically lethal with RPT1, wh... 3 7 14.6% 4.93E-4 31919
[View Peptides]   POP6 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor... 2 7 14.6% 8.55E-4 18210
[View Peptides]   ADA2 Transcription coactivator, component of the ADA and SAGA transcriptional adaptor/HAT (histone acetyl... 3 3 14.5% 1.33E-4 50569
[View Peptides]   SPP1 Subunit of COMPASS (Set1C), a complex which methylates histone H3 on lysine 4 and is required in tel... 3 4 14.4% 2.19E-4 41468
[View Peptides]   YBL010C Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein colocalizes wit... 2 3 14.3% 2.07E-4 32639
[View Peptides]   FMS1 Polyamine oxidase, converts spermine to spermidine, which is required for the essential hypusination... 3 3 14.2% 1.14E-4 57806
[View Peptides]   CAC2 Component of the chromatin assembly complex (with Rlf2p and Msi1p) that assembles newly synthesized ... 4 5 14.1% 2.06E-4 51252
[View Peptides]   BUG1 Cis-golgi localized protein involved in ER to Golgi transport; forms a complex with the mammalian GR... 2 2 14.1% 1.13E-4 38295
[View Peptides]   CDC45 DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promote... 4 11 14.0% 3.27E-4 74249
[View Peptides]   RPA49 RNA polymerase I subunit A49 2 2 14.0% 9.3E-5 46651
[View Peptides]   INO80 ATPase, subunit of a complex containing actin and several actin-related proteins that has chromatin ... 13 15 13.9% 1.94E-4 171454
[View Peptides]   PNT1 Mitochondrial integral inner membrane protein involved in membrane insertion of C-terminus of Cox2p,... 2 2 13.9% 9.12E-5 48934
[View Peptides]   STE4 G protein beta subunit, forms a dimer with Ste18p to activate the mating signaling pathway, forms a ... 3 4 13.9% 1.82E-4 46581
[View Peptides]   SPT3 Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to act... 3 5 13.9% 2.86E-4 38800
[View Peptides]   TRA1 Subunit of SAGA and NuA4 histone acetyltransferase complexes; interacts with acidic activators (e.g.... 32 38 13.7% 1.96E-4 433182
[View Peptides]   RSE1 Protein involved in pre-mRNA splicing; component of the pre-spliceosome; associates with U2 snRNA; i... 13 29 13.7% 4.11E-4 153784
[View Peptides]   SWD2 Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 and is involved in telo... 3 8 13.7% 4.69E-4 37122
[View Peptides]   FIT1 Mannoprotein that is incorporated into the cell wall via a glycosylphosphatidylinositol (GPI) anchor... 3 3 13.6% 1.1E-4 52491
[View Peptides]   YJL213W Protein of unknown function that may interact with ribosomes; periodically expressed during the yeas... 2 2 13.6% 1.17E-4 35905
[View Peptides]   YFL034W Putative integral membrane protein that interacts with Rpp0p, which is a component of the ribosomal ... 8 8 13.5% 1.44E-4 119496
[View Peptides]   NGG1 Transcriptional regulator involved in glucose repression of Gal4p-regulated genes; component of tran... 5 13 13.5% 3.57E-4 79282
[View Peptides]   CCT2 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assemb... 6 6 13.5% 2.2E-4 57203
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 4 5 13.5% 2.11E-4 50033
[View Peptides]   VPS41 Vacuolar membrane protein that is a subunit of the homotypic vacuole fusion and vacuole protein sort... 10 11 13.4% 2.14E-4 113412
[View Peptides]   EDC3 Non-essential conserved protein of unknown function, plays a role in mRNA decapping by specifically ... 5 30 13.4% 0.00105 61340
[View Peptides]   YHR122W Protein of unknown function required for establishment of sister chromatid cohesion; synthetically l... 2 2 13.4% 1.67E-4 25675
[View Peptides]   RMP1 Subunit of RNase MRP, which processes pre-rRNA and has a role in cell cycle-regulated degradation of... 2 2 13.4% 1.92E-4 23619
[View Peptides]   HS74_YEAST, HSP7... (P22202) Heat shock protein SSA4, (P22202) Heat shock protein SSA4 10 12 13.3% 3.61E-4 69520
[View Peptides]   IMP2' Transcriptional activator involved in maintenance of ion homeostasis and protection against DNA dama... 4 5 13.3% 2.79E-4 39071
[View Peptides]   GGC1 Mitochondrial GTP/GDP transporter, essential for mitochondrial genome maintenance; has a role in mit... 2 2 13.3% 1.29E-4 33215
[View Peptides]   PAN1 Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, associates with actin patches on th... 9 10 13.2% 1.3E-4 160266
[View Peptides]   gi|1710847, gi|1... gi|1710847|sp|P43612|SA155_YEAST SIT4-associating protein SAP155, gi|1345142|gb|AAC49303.1| Sap155p 6 6 13.2% 1.16E-4 114880
[View Peptides]   DRS1 Nucleolar DEAD-box protein required for ribosome assembly and function, including synthesis of 60S r... 5 8 13.2% 2.05E-4 84843
[View Peptides]   NPA3 Essential, conserved, cytoplasmic ATPase; phosphorylated by the Pcl1p-Pho85p kinase complex 3 4 13.2% 2.0E-4 43195
[View Peptides]   YIP5 Protein that interacts with Rab GTPases, localized to late Golgi vesicles; computational analysis of... 2 2 13.2% 1.24E-4 34843
[View Peptides]   PRS2 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot... 2 4 13.2% 2.43E-4 34765
[View Peptides]   SIR3 Silencing protein that interacts with Sir2p and Sir4p, and histone H3 and H4 tails, to establish a t... 8 10 13.1% 1.97E-4 111360
[View Peptides]   gi|1078215, gi|5... sp|P38262|SIF2_YEAST SIR4-interacting protein SIF2, gi|476059|emb|CAA55606.1| YBR0832 [Saccharomyce... 6 8 13.1% 2.89E-4 59145
[View Peptides]   VBA3 Permease of basic amino acids in the vacuolar membrane 3 3 13.1% 1.26E-4 50225
[View Peptides]   PRY1 Protein of unknown function 2 2 13.0% 1.29E-4 30634
[View Peptides]   RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A) 3 3 13.0% 2.28E-4 28612
[View Peptides]   RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B) 3 3 13.0% 2.28E-4 28681
[View Peptides]   SIN3 Component of the Sin3p-Rpd3p histone deacetylase complex, involved in transcriptional repression and... 15 19 12.9% 2.39E-4 174838
[View Peptides]   LCP5 Essential protein involved in maturation of 18S rRNA; depletion leads to inhibited pre-rRNA processi... 2 2 12.9% 1.08E-4 40794
[View Peptides]   GRC3 Protein of unknown function, required for cell growth and possibly involved in rRNA processing; mRNA... 4 4 12.8% 1.22E-4 72258
[View Peptides]   SDS3 Component of the Rpd3p/Sin3p deacetylase complex required for its structural integrity and catalytic... 2 2 12.8% 1.18E-4 37625
[View Peptides]   PCT1 Cholinephosphate cytidylyltransferase, also known as CTP:phosphocholine cytidylyltransferase, rate-d... 2 2 12.7% 9.1E-5 49406
[View Peptides]   VTA1 Multivesicular body (MVB) protein involved in endosomal protein sorting; regulates Vps4p activity by... 2 4 12.7% 2.34E-4 37316
[View Peptides]   G3P3_YEAST (P00359) Glyceraldehyde-3-phosphate dehydrogenase 3 (EC 1.2.1.12) (GAPDH 3) 2 2 12.7% 1.17E-4 35615
[View Peptides]   YHL026C Putative protein of unknown function; YHL026C is not an essential gene; in 2005 the start site was m... 2 2 12.7% 1.44E-4 30667
[View Peptides]   MCM1 Transcription factor involved in cell-type-specific transcription and pheromone response; plays a ce... 2 2 12.6% 1.35E-4 32802
[View Peptides]   SWI6 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p to regulate transc... 5 5 12.5% 1.2E-4 90560
[View Peptides]   TAF2 TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation 9 13 12.4% 1.78E-4 161470
[View Peptides]   SNU114 GTPase component of U5 snRNP involved in mRNA splicing via spliceosome; binds directly to U5 snRNA; ... 9 11 12.4% 2.11E-4 114041
[View Peptides]   NPL6 Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Ldb7p, and Htl1p to... 3 3 12.4% 1.33E-4 49651
[View Peptides]   PRP4 Splicing factor, component of the U4/U6-U5 snRNP complex 3 3 12.3% 1.24E-4 52442
[View Peptides]   SIP2_YEAST (P34164) Protein SIP2 (Protein SPM2) 2 2 12.3% 9.32E-5 46273
[View Peptides]   ATG3 E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway; plays a r... 2 2 12.3% 1.24E-4 35887
[View Peptides]   SAW1 Protein involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during double-strand br... 2 2 12.3% 1.48E-4 29770
[View Peptides]   OSH2 Member of an oxysterol-binding protein family with seven members in S. cerevisiae; family members ha... 8 11 12.2% 1.65E-4 145796
[View Peptides]   NAN1 U3 snoRNP protein, component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRN... 6 12 12.2% 2.58E-4 101237
[View Peptides]   AAR2 Component of the U5 snRNP, required for splicing of U3 precursors; originally described as a splicin... 3 4 12.1% 2.17E-4 41688
[View Peptides]   PRP8 Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing; mutation... 16 26 12.0% 2.08E-4 279502
[View Peptides]   TRM11 Catalytic subunit of an adoMet-dependent tRNA methyltransferase complex (Trm11p-Trm112p), required f... 2 2 12.0% 8.91E-5 50073
[View Peptides]   RPA135 RNA polymerase I second largest subunit A135 8 9 11.8% 1.44E-4 135742
[View Peptides]   CKA1 Alpha catalytic subunit of casein kinase 2, a Ser/Thr protein kinase with roles in cell growth and p... 3 7 11.8% 3.63E-4 44668
[View Peptides]   gi|2914549, gi|1... gi|88192080|pdb|2AL1|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex At Ph 8.0, ... 2 4 11.7% 1.77E-4 46671
[View Peptides]   ENO2_YEAST (P00925) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lya... 2 4 11.7% 1.77E-4 46783
[View Peptides]   ETR1_YEAST, MRF1... (P38071) Enoyl-[acyl-carrier protein] reductase [NADPH, B-specific] (EC 1.3.1.10) (Trans-2-enoyl-CoA... 2 3 11.6% 1.56E-4 40898
[View Peptides]   SIT4 Type 2A-related serine-threonine phosphatase that functions in the G1/S transition of the mitotic cy... 3 5 11.6% 3.1E-4 35538
[View Peptides]   RS0A_YEAST (P32905) 40S ribosomal protein S0-A (Nucleic acid-binding protein NAB1A) 2 2 11.6% 1.54E-4 27893
[View Peptides]   CDC27 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase req... 4 4 11.5% 1.02E-4 85437
[View Peptides]   RUP1 Protein involved in regulation of Rsp5p, which is an essential HECT ubiquitin ligase; has a WW domai... 5 5 11.5% 1.44E-4 75361
[View Peptides]   COG8 Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tethering com... 3 3 11.5% 9.54E-5 69829
[View Peptides]   GAL83 One of three possible beta-subunits of the Snf1 kinase complex, allows nuclear localization of the S... 2 2 11.5% 9.25E-5 46648
[View Peptides]   RPA190 RNA polymerase I largest subunit A190 14 18 11.4% 2.09E-4 186431
[View Peptides]   REB1 RNA polymerase I enhancer binding protein; DNA binding protein which binds to genes transcribed by b... 4 4 11.4% 9.53E-5 91874
[View Peptides]   YMC1 Mitochondrial protein, putative inner membrane transporter with a role in oleate metabolism and glut... 2 2 11.4% 1.26E-4 33376
[View Peptides]   VPS16 Subunit of the vacuole fusion and protein sorting HOPS complex and the CORVET tethering complex; par... 6 6 11.3% 1.45E-4 92741
[View Peptides]   ARK1 Serine/threonine protein kinase involved in regulation of the cortical actin cytoskeleton; involved ... 4 4 11.3% 1.21E-4 71373
[View Peptides]   CBF2 Essential kinetochore protein, component of the CBF3 multisubunit complex that binds to the CDEIII r... 5 7 11.1% 1.41E-4 111917
[View Peptides]   HOS2 Histone deacetylase required for gene activation via specific deacetylation of lysines in H3 and H4 ... 2 3 11.1% 1.28E-4 51455
[View Peptides]   MND2 Subunit of the anaphase-promoting complex (APC); necessary for maintaining sister chromatid cohesion... 2 2 11.1% 1.05E-4 42826
[View Peptides]   HSP7F_YEAST, HS7... (P32589) Heat shock protein homolog SSE1 (Chaperone protein MSI3), (P32589) Heat shock protein homol... 5 10 11.0% 2.79E-4 77235
[View Peptides]   IPI3 Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) that is required for processing of ITS... 2 2 11.0% 6.95E-5 61773
[View Peptides]   YLR049C Putative protein of unknown function 2 2 11.0% 9.02E-5 49493
[View Peptides]   RTF1 Subunit of the RNA polymerase II-associated Paf1 complex; directly or indirectly regulates DNA-bindi... 4 8 10.9% 2.77E-4 65869
[View Peptides]   ZPR1 Essential protein with two zinc fingers, present in the nucleus of growing cells but relocates to th... 2 2 10.9% 7.94E-5 55072
[View Peptides]   GDH3 NADP(+)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarat... 2 2 10.9% 8.44E-5 49627
[View Peptides]   IRR1 Subunit of the cohesin complex, which is required for sister chromatid cohesion during mitosis and m... 7 9 10.8% 1.51E-4 133009
[View Peptides]   EGT2 Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase required for proper cell separat... 3 3 10.8% 5.56E-5 108495
[View Peptides]   SYDC_YEAST (P04802) Aspartyl-tRNA synthetase, cytoplasmic (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS) 3 3 10.8% 1.04E-4 63384
[View Peptides]   MFB1 Mitochondria-associated F-box protein involved in maintenance of normal mitochondrial morphology; in... 3 5 10.8% 2.07E-4 53168
[View Peptides]   RPN10 Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome; N-terminus plays ... 2 2 10.8% 1.44E-4 29747
[View Peptides]   TBS1 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi... 5 5 10.7% 8.82E-5 126903
[View Peptides]   NAM9 Mitochondrial ribosomal component of the small subunit 2 2 10.7% 7.94E-5 56356
[View Peptides]   CUS1 Protein required for assembly of U2 snRNP into the spliceosome, forms a complex with Hsh49p and Hsh1... 2 2 10.6% 8.85E-5 50253
[View Peptides]   YLR057W Putative protein of unknown function; YLR050C is not an essential gene 4 5 10.5% 1.14E-4 96997
[View Peptides]   UFO1 F-box receptor protein, subunit of the Skp1-Cdc53-F-box receptor (SCF) E3 ubiquitin ligase complex; ... 5 6 10.5% 1.73E-4 76860
[View Peptides]   TFC8 One of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of ... 4 4 10.5% 1.31E-4 67684
[View Peptides]   BFR2 Essential protein that is a component of 90S preribosomes; may be involved in rRNA processing; multi... 4 5 10.5% 1.81E-4 61203
[View Peptides]   VPS5 Nexin-1 homolog required for localizing membrane proteins from a prevacuolar/late endosomal compartm... 3 3 10.4% 8.58E-5 76484
[View Peptides]   VMA2 Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a... 3 7 10.4% 2.61E-4 57749
[View Peptides]   POP5 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor... 2 2 10.4% 2.23E-4 19574
[View Peptides]   VBA5 Putative transporter of the Major Facilitator Superfamily (MFS); proposed role as a basic amino acid... 3 3 10.3% 9.95E-5 63361
[View Peptides]   PWP2 Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA... 5 8 10.3% 1.67E-4 103983
[View Peptides]   SFL1 Transcriptional repressor and activator; involved in repression of flocculation-related genes, and a... 3 3 10.3% 7.56E-5 83317
[View Peptides]   ATG7 Autophagy-related protein and dual specificity member of the E1 family of ubiquitin-activating enzym... 4 4 10.3% 1.23E-4 71428
[View Peptides]   RAD18 E3 ubiqutin ligase, forms heterodimer with Rad6p to monoubiquitinate PCNA-K164; heterodimer binds si... 3 3 10.3% 1.19E-4 55230
[View Peptides]   YDL233W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 2 2 10.3% 8.43E-5 51320
[View Peptides]   gi|49258842 gi|49258842|pdb|1S1I|D Chain D, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 2 2 10.2% 1.07E-4 38931
[View Peptides]   RL4A_YEAST (P10664) 60S ribosomal protein L4-A (L2A) (RP2) 2 2 10.2% 1.07E-4 38961
[View Peptides]   ZTA1 NADPH-dependent quinone reductase, GFP-tagged protein localizes to the cytoplasm and nucleus; has si... 2 2 10.2% 1.16E-4 37019
[View Peptides]   VID27 Cytoplasmic protein of unknown function; possibly involved in vacuolar protein degradation; not esse... 5 5 10.1% 1.23E-4 88846
[View Peptides]   CTI6 Protein that relieves transcriptional repression by binding to the Cyc8p-Tup1p corepressor and recru... 2 2 10.1% 7.63E-5 57053
[View Peptides]   MRS6 Rab escort protein, forms a complex with the Ras-like small GTPase Ypt1p that is required for the pr... 3 3 10.0% 9.6E-5 67374
[View Peptides]   RME1 Zinc finger protein involved in control of meiosis; prevents meiosis by repressing IME1 expression a... 2 5 10.0% 3.22E-4 33904
[View Peptides]   GSP2 GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RN... 2 2 10.0% 1.75E-4 24991
[View Peptides]   GSP1 Ran GTPase, GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear orga... 2 2 10.0% 1.76E-4 24810
[View Peptides]   YDR131C F-box protein, substrate-specific adaptor subunit that recruits substrates to a core ubiquitination ... 3 3 9.9% 1.04E-4 65243
[View Peptides]   MKT1 Protein that forms a complex with Pbp1p that may mediate posttranscriptional regulation of HO endonu... 3 3 9.8% 6.97E-5 94494
[View Peptides]   YGR130C Putative protein of unknown function; GFP-fusion protein localizes to the cytoplasm; possible compon... 3 4 9.8% 9.46E-5 92698
[View Peptides]   gi|1351369, gi|6... gi|662800|gb|AAC13785.1| Srb10p, gi|1351369|sp|P39073|UME5_YEAST Meiotic mRNA stability protein kina... 3 3 9.8% 1.07E-4 61193
[View Peptides]   YPR045C Protein of unknown function; involvement in splicing based on pre-mRNA accumulation defect for many ... 3 17 9.8% 6.98E-4 53719
[View Peptides]   RPN7 Essential, non-ATPase regulatory subunit of the 26S proteasome, similar to another S. cerevisiae reg... 3 3 9.8% 1.35E-4 48959
[View Peptides]   CDC12 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui... 2 3 9.8% 1.42E-4 46668
[View Peptides]   SCW10 Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based ... 2 2 9.8% 9.92E-5 40469
[View Peptides]   PHO85 Cyclin-dependent kinase, with ten cyclin partners; involved in regulating the cellular response to n... 2 2 9.8% 1.27E-4 34906
[View Peptides]   RIX1 Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) that is required for processing of ITS... 4 4 9.7% 1.01E-4 86667
[View Peptides]   CEP3 Essential kinetochore protein, component of the CBF3 complex that binds the CDEIII region of the cen... 3 3 9.7% 9.52E-5 71358
[View Peptides]   HEM15 Ferrochelatase, a mitochondrial inner membrane protein, catalyzes the insertion of ferrous iron into... 2 2 9.7% 9.82E-5 44596
[View Peptides]   JHD2 JmjC domain family histone demethylase specific for H3-K4 (histone H3 Lys4); removes methyl groups s... 4 4 9.6% 1.06E-4 84984
[View Peptides]   gi|1174617 gi|1174617|sp|P40413|TCPE_YEAST T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) 3 4 9.6% 1.4E-4 60677
[View Peptides]   GLE2 Component of the Nup82 subcomplex of the nuclear pore complex; required for polyadenylated RNA expor... 2 2 9.6% 1.06E-4 40523
[View Peptides]   MCM4 Essential helicase component of heterohexameric MCM2-7 complexes which bind pre-replication complexe... 4 4 9.5% 8.27E-5 105003
[View Peptides]   IOC3 Member of a complex (Isw1a) with Isw1p that has nucleosome-stimulated ATPase activity and represses ... 4 4 9.5% 9.81E-5 90897
[View Peptides]   SFP1 Transcription factor that controls expression of ribosome biogenesis genes in response to nutrients ... 2 2 9.5% 5.65E-5 74785
[View Peptides]   CDC40 Pre-mRNA splicing factor, important for catalytic step II of pre-mRNA splicing and plays a role in c... 2 2 9.5% 8.48E-5 52048
[View Peptides]   STM1 Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with r... 2 2 9.5% 1.41E-4 29995
[View Peptides]   SFB2 Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, required for cargo selection du... 6 6 9.4% 1.32E-4 98943
[View Peptides]   YMR031C Protein of unknown function with similarity to Ykl050cp and Uso1p; the authentic, non-tagged protein... 4 4 9.4% 9.16E-5 93345
[View Peptides]   SGV1 Cyclin (Bur2p)-dependent protein kinase that functions in transcriptional regulation; phosphorylates... 3 3 9.4% 8.81E-5 74239
[View Peptides]   RSC4 Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; disp... 3 3 9.4% 9.26E-5 72276
[View Peptides]   SNU71 Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counte... 2 2 9.4% 6.22E-5 71383
[View Peptides]   PPT1 Protein serine/threonine phosphatase with similarity to human phosphatase PP5; present in both the n... 2 2 9.4% 7.52E-5 57995
[View Peptides]   CCP1 Mitochondrial cytochrome-c peroxidase; degrades reactive oxygen species in mitochondria, involved in... 2 2 9.4% 1.07E-4 40353
[View Peptides]   GCS1 ADP-ribosylation factor GTPase activating protein (ARF GAP), involved in ER-Golgi transport; shares ... 2 3 9.4% 1.64E-4 39296
[View Peptides]   DOS2 Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the cytopla... 3 5 9.4% 3.11E-4 35964
[View Peptides]   YGR160W [DUBIOUS] Dubious open reading frame unlikely to encode a functional protein, based on available exp... 2 4 9.4% 3.8E-4 22179
[View Peptides]   MED2 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 2 2 9.3% 8.95E-5 47718
[View Peptides]   RRI2 Subunit of the COP9 signalosome (CSN) complex that cleaves the ubiquitin-like protein Nedd8 from SCF... 2 2 9.1% 5.98E-5 76389
[View Peptides]   SRB8 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 8 8 9.0% 1.08E-4 166860
[View Peptides]   NOP58 Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the ... 3 5 9.0% 1.89E-4 56956
[View Peptides]   CWH41 Processing alpha glucosidase I, ER type II integral membrane N-glycoprotein involved in assembly of ... 4 4 8.9% 9.27E-5 96507
[View Peptides]   OSH6 Member of an oxysterol-binding protein family with overlapping, redundant functions in sterol metabo... 2 2 8.9% 8.61E-5 51588
[View Peptides]   CTR1 High-affinity copper transporter of the plasma membrane, mediates nearly all copper uptake under low... 2 3 8.9% 1.43E-4 44442
[View Peptides]   PUG1 Plasma membrane protein with roles in the uptake of protoprophyrin IX and the efflux of heme; expres... 2 4 8.9% 2.55E-4 33733
[View Peptides]   VAM6 Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion by fa... 5 6 8.8% 1.1E-4 122881
[View Peptides]   YHR113W Cytoplasmic aspartyl aminopeptidase; cleaves unblocked N-terminal acidic amino acid residues from pe... 2 2 8.8% 7.88E-5 54174
[View Peptides]   IVY1 Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, may partially counteract the... 2 2 8.8% 8.52E-5 49976
[View Peptides]   TOR2 PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that regulates growth i... 12 22 8.7% 1.72E-4 281509
[View Peptides]   CDC4 F-box protein required for G1/S and G2/M transition, associates with Skp1p and Cdc53p to form a comp... 5 6 8.7% 1.49E-4 86090
[View Peptides]   YDR049W Zinc finger protein; putative transcription factor that may interact with proteins involved in histo... 5 6 8.7% 1.83E-4 72733
[View Peptides]   KEL1 Protein required for proper cell fusion and cell morphology; functions in a complex with Kel2p to ne... 6 8 8.6% 1.33E-4 131094
[View Peptides]   SET1 Histone methyltransferase, subunit of the COMPASS (Set1C) complex which methylates histone H3 on lys... 7 12 8.6% 2.14E-4 123912
[View Peptides]   RGA1 GTPase-activating protein for the polarity-establishment protein Cdc42p; implicated in control of se... 4 4 8.6% 7.66E-5 112831
[View Peptides]   gi|1169907, gi|9... gi|902793|gb|AAA91646.1| Glg1p, sp|P36143|GLG1_YEAST Glycogen synthesis initiator protein GLG1 2 2 8.6% 6.24E-5 69912
[View Peptides]   TFB2 Subunit of TFIIH and nucleotide excision repair factor 3 complexes, involved in transcription initia... 2 2 8.6% 7.52E-5 58535
[View Peptides]   DMA2 Protein involved in ubiquitination; plays a role in regulating spindle position and orientation; fun... 3 3 8.6% 1.11E-4 57584
[View Peptides]   SRV2 CAP (cyclase-associated protein) subunit of adenylyl cyclase complex; N-terminus binds adenylyl cycl... 2 2 8.6% 7.34E-5 57522
[View Peptides]   CDC1 Putative lipid phosphatase of the endoplasmic reticulum; shows Mn2+ dependence and may affect Ca2+ s... 3 3 8.6% 1.18E-4 57147
[View Peptides]   ATG17 Scaffold protein responsible for phagophore assembly site organization; regulatory subunit of an aut... 2 2 8.6% 9.25E-5 48656
[View Peptides]   APL2 Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex; binds clathrin; invol... 4 5 8.5% 1.33E-4 81869
[View Peptides]   THI6 Bifunctional enzyme with thiamine-phosphate pyrophosphorylase and 4-methyl-5-beta-hydroxyethylthiazo... 2 3 8.5% 1.07E-4 58059
[View Peptides]   MRI1 5'-methylthioribose-1-phosphate isomerase; catalyzes the isomerization of 5-methylthioribose-1-phosp... 2 3 8.5% 1.41E-4 45020
[View Peptides]   SNT1 Subunit of the Set3C deacetylase complex that interacts directly with the Set3C subunit, Sif2p; puta... 5 5 8.4% 7.87E-5 138397
[View Peptides]   YCG1 Subunit of the condensin complex; required for establishment and maintenance of chromosome condensat... 5 5 8.4% 9.32E-5 117851
[View Peptides]   JIP5 Essential protein required for biogenesis of the large ribosomal subunit; interacts with proteins in... 3 3 8.4% 1.13E-4 57517
[View Peptides]   URN1 Putative protein of unknown function containing WW and FF domains; overexpression causes accumulatio... 2 3 8.4% 1.24E-4 54139
[View Peptides]   ARP9 Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved... 3 3 8.4% 1.24E-4 53074
[View Peptides]   RRP15 Nucleolar protein, constituent of pre-60S ribosomal particles; required for proper processing of the... 2 4 8.4% 3.09E-4 28212
[View Peptides]   YNL311C Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 3 4 8.3% 1.01E-4 88942
[View Peptides]   NUP82 Nucleoporin, subunit of the nuclear pore complex (NPC); forms a subcomplex with Gle2p, Nup159p, Nsp1... 4 6 8.3% 1.62E-4 82085
[View Peptides]   ISW2 ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, f... 5 6 8.2% 1.03E-4 130327
[View Peptides]   IRC5 Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increase... 4 8 8.2% 1.98E-4 88730
[View Peptides]   VIK1 Protein that forms a complex with Kar3p at the spindle pole body, possible regulator of Kar3p functi... 3 3 8.2% 8.95E-5 75730
[View Peptides]   TEC1 Transcription factor required for full Ty1 expression, Ty1-mediated gene activation, and haploid inv... 2 2 8.2% 7.94E-5 55158
[View Peptides]   PBA1 Protein involved in 20S proteasome assembly; forms a heterodimer with Add66p that binds to proteasom... 2 2 8.2% 1.75E-4 24266
[View Peptides]   YJR028W Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 8.2% 8.77E-5 49112
[View Peptides]   YDR261C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YDRCTY1-3 TYB is mutant and probably no... 2 2 8.2% 8.77E-5 49009
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 8.2% 8.77E-5 48993
[View Peptides]   YBR012W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 8.2% 8.77E-5 49068
[View Peptides]   YML045W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 8.2% 8.77E-5 49122
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 8.2% 8.77E-5 49129
[View Peptides]   YGR027W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 8.2% 8.77E-5 49056
[View Peptides]   YDR098C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 8.2% 8.77E-5 49057
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 8.2% 8.77E-5 48953
[View Peptides]   GPI1 Membrane protein involved in the synthesis of N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI),... 2 2 8.0% 6.34E-5 70354
[View Peptides]   YLR108C Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus... 2 2 8.0% 7.96E-5 55601
[View Peptides]   SPS22 Protein of unknown function, redundant with Sps2p for the organization of the beta-glucan layer of t... 2 2 8.0% 8.33E-5 52008
[View Peptides]   PTK1 Putative serine/threonine protein kinase that regulates spermine uptake; involved in polyamine trans... 2 2 7.9% 6.89E-5 63178
[View Peptides]   KTR5 Putative mannosyltransferase involved in protein glycosylation; member of the KRE2/MNT1 mannosyltran... 2 2 7.9% 7.39E-5 61728
[View Peptides]   SNG1 Protein involved in resistance to nitrosoguanidine (MNNG) and 6-azauracil (6-AU); expression is regu... 2 2 7.9% 7.05E-5 61294
[View Peptides]   RRT12 Probable subtilisin-family protease with a role in formation of the dityrosine layer of spore walls;... 2 2 7.9% 7.86E-5 55068
[View Peptides]   gi|3645900, gi|6... gi|6320955|ref|NP_011034.1| Transcription factor required for flocculation, diploid filamentous grow... 2 2 7.8% 4.83E-5 86835
[View Peptides]   RGD2 GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p 2 5 7.8% 1.35E-4 82208
[View Peptides]   BUD14 Protein involved in bud-site selection, Bud14p-Glc7p complex is a cortical regulator of dynein; inhi... 4 4 7.8% 1.09E-4 79063
[View Peptides]   MON1 Protein required for fusion of cvt-vesicles and autophagosomes with the vacuole; associates, as a co... 2 2 7.8% 5.99E-5 73494
[View Peptides]   RAD7 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) during nucleo... 2 2 7.8% 6.83E-5 63778
[View Peptides]   MCH4 Protein with similarity to mammalian monocarboxylate permeases, which are involved in transport of m... 2 2 7.8% 7.7E-5 54707
[View Peptides]   TFC6 One of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of ... 3 3 7.7% 8.61E-5 74709
[View Peptides]   MET30 F-box protein containing five copies of the WD40 motif, controls cell cycle function, sulfur metabol... 3 3 7.7% 9.04E-5 72835
[View Peptides]   ASF2 Anti-silencing protein that causes derepression of silent loci when overexpressed 2 2 7.6% 7.35E-5 59347
[View Peptides]   CMR2 Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-induc... 9 11 7.5% 1.29E-4 186906
[View Peptides]   RSC1 Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-s... 3 3 7.5% 6.24E-5 106669
[View Peptides]   SNX41 Sorting nexin, involved in the retrieval of late-Golgi SNAREs from the post-Golgi endosome to the tr... 2 3 7.5% 9.26E-5 70741
[View Peptides]   RSC8 Component of the RSC chromatin remodeling complex; essential for viability and mitotic growth; homol... 3 6 7.5% 2.08E-4 63168
[View Peptides]   ADE4 Phosphoribosylpyrophosphate amidotransferase (PRPPAT; amidophosphoribosyltransferase), catalyzes fir... 2 2 7.5% 7.57E-5 56719
[View Peptides]   BDH2 Putative medium-chain alcohol dehydrogenase with similarity to BDH1; transcription induced by consti... 3 3 7.4% 1.39E-4 46099
[View Peptides]   HOS4 Subunit of the Set3 complex, which is a meiotic-specific repressor of sporulation specific genes tha... 4 4 7.3% 7.13E-5 123556
[View Peptides]   ADE13 Adenylosuccinate lyase, catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway;... 2 2 7.3% 8.01E-5 54511
[View Peptides]   YDR170W-A Retrotransposon TYA Gag gene; Gag is a nucleocapsid protein that is the structural constituent of vi... 2 2 7.3% 8.77E-5 49445
[View Peptides]   SWD3 Essential subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is req... 2 3 7.3% 1.84E-4 34754
[View Peptides]   RSC6 Component of the RSC chromatin remodeling complex; essential for mitotic growth; homolog of SWI/SNF ... 3 3 7.2% 1.2E-4 54165
[View Peptides]   YDL073W Putative protein of unknown function; YDL073W is not an essential gene 3 73 7.1% 0.00143 113891
[View Peptides]   GTB1 Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p, involved in removal of two gl... 2 2 7.1% 5.5E-5 79908
[View Peptides]   RGD1 GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, possibly involved in control of actin cytosk... 3 3 7.1% 8.69E-5 74619
[View Peptides]   TFC1 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part... 3 3 7.1% 8.92E-5 73554
[View Peptides]   GCN5 Histone acetyltransferase, acetylates N-terminal lysines on histones H2B and H3; catalytic subunit o... 2 2 7.1% 8.79E-5 51069
[View Peptides]   SAP185 Protein that forms a complex with the Sit4p protein phosphatase and is required for its function; me... 4 5 7.0% 9.12E-5 121403
[View Peptides]   UGA3 Transcriptional activator necessary for gamma-aminobutyrate (GABA)-dependent induction of GABA genes... 2 3 7.0% 1.1E-4 61224
[View Peptides]   PRP24 Splicing factor that reanneals U4 and U6 snRNPs during spliceosome recycling 2 3 7.0% 1.3E-4 50849
[View Peptides]   DLT1 Protein of unknown function, mutant sensitive to 6-azauracil (6AU) and mycophenolic acid (MPA) 2 2 7.0% 1.13E-4 39187
[View Peptides]   CYK3 SH3-domain protein located in the mother-bud neck and the cytokinetic actin ring; mutant phenotype a... 2 4 6.9% 8.72E-5 100621
[View Peptides]   MDM32 Mitochondrial inner membrane protein with similarity to Mdm31p, required for normal mitochondrial mo... 2 2 6.9% 5.91E-5 75555
[View Peptides]   TAF12 Subunit (61/68 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiat... 2 3 6.9% 1.07E-4 61073
[View Peptides]   TOD6 PAC motif binding protein involved in rRNA and ribosome biogenesis; subunit of the RPD3L histone dea... 2 2 6.9% 7.35E-5 59226
[View Peptides]   VAC14 Protein involved in regulated synthesis of PtdIns(3,5)P(2), in control of trafficking of some protei... 4 4 6.8% 8.77E-5 99773
[View Peptides]   AKR2 Ankyrin repeat-containing protein similar to Akr1p; member of a family of putative palmitoyltransfer... 2 2 6.8% 5.15E-5 85236
[View Peptides]   RAD61 Subunit of a complex (Scc3p, Pds5p, Rad61p) that inhibits sister chromatid cohesion; inhibited by Ec... 3 3 6.8% 8.95E-5 74722
[View Peptides]   GCD2 Delta subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for... 2 2 6.8% 5.93E-5 70852
[View Peptides]   MEP2 Ammonium permease involved in regulation of pseudohyphal growth; belongs to a ubiquitous family of c... 2 2 6.8% 7.73E-5 53401
[View Peptides]   ITC1 Component of the ATP-dependent Isw2p-Itc1p chromatin remodeling complex, required for repression of ... 4 4 6.7% 6.11E-5 145642
[View Peptides]   SNF5 Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; function... 3 3 6.7% 6.4E-5 102556
[View Peptides]   NUP100 Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore; contains a re... 2 2 6.7% 4.02E-5 99988
[View Peptides]   gi|2340994 gi|2340994|gb|AAB67523.1| Sen1p [Saccharomyces cerevisiae] 2 2 6.7% 5.1E-5 84888
[View Peptides]   ITR2 Myo-inositol transporter with strong similarity to the major myo-inositol transporter Itr1p, member ... 2 2 6.7% 6.31E-5 67042
[View Peptides]   GLE1 Cytoplasmic nucleoporin required for polyadenylated RNA export but not for protein import; component... 2 2 6.7% 7.17E-5 62073
[View Peptides]   MAS1 Smaller subunit of the mitochondrial processing protease (MPP), essential processing enzyme that cle... 2 2 6.7% 8.35E-5 51084
[View Peptides]   gi|453570, gi|585212 gi|585212|sp|P37303.1|GLY1_YEAST RecName: Full=Low specificity L-threonine aldolase; Short=Low speci... 2 2 6.7% 9.97E-5 42797
[View Peptides]   ISW1 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes; ATPase ... 4 6 6.6% 1.03E-4 131102
[View Peptides]   RSC58 Component of the RSC chromatin remodeling complex; RSC functions in transcriptional regulation and e... 2 3 6.6% 1.15E-4 57795
[View Peptides]   PEP3 Component of CORVET tethering complex; vacuolar peripheral membrane protein that promotes vesicular ... 4 6 6.5% 1.26E-4 107398
[View Peptides]   SPO22 Meiosis-specific protein essential for chromosome synapsis, involved in completion of nuclear divisi... 2 2 6.5% 4.36E-5 102357
[View Peptides]   YSH1 Putative endoribonuclease, subunit of the mRNA cleavage and polyadenylation specificity complex; req... 2 2 6.5% 4.95E-5 87674
[View Peptides]   HMI1 Mitochondrial inner membrane localized ATP-dependent DNA helicase, required for the maintenance of t... 3 8 6.5% 2.19E-4 80576
[View Peptides]   PSO2 Nuclease required for a post-incision step in the repair of DNA single and double-strand breaks that... 2 3 6.5% 8.76E-5 76399
[View Peptides]   SWI3 Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chr... 2 2 6.4% 4.68E-5 92926
[View Peptides]   TFG1 TFIIF (Transcription Factor II) largest subunit; involved in both transcription initiation and elong... 2 2 6.4% 5.25E-5 82194
[View Peptides]   RNT1 RNAase III; involved in rDNA transcription and rRNA processing; also cleaves a stem-loop structure a... 2 2 6.4% 8.19E-5 54071
[View Peptides]   gi|399005, gi|3324 gi|399005|sp|Q01574.1|ACS1_YEAST RecName: Full=Acetyl-coenzyme A synthetase 1; AltName: Full=Acetate... 2 2 6.3% 5.41E-5 79169
[View Peptides]   LEU4 Alpha-isopropylmalate synthase (2-isopropylmalate synthase); the main isozyme responsible for the fi... 2 2 6.3% 6.23E-5 68409
[View Peptides]   MCM10 Essential chromatin-associated protein involved in the initiation of DNA replication; required for t... 2 2 6.3% 6.76E-5 65815
[View Peptides]   CAN1 Plasma membrane arginine permease, requires phosphatidyl ethanolamine (PE) for localization, exclusi... 2 2 6.3% 6.54E-5 65786
[View Peptides]   APC1 Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein li... 5 5 6.2% 5.52E-5 196143
[View Peptides]   APC2 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase req... 3 3 6.2% 6.79E-5 99978
[View Peptides]   TEL2 Essential DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for ... 2 21 6.2% 5.89E-4 78687
[View Peptides]   YLR446W Putative protein of unknown function with similarity to hexokinases; transcript is upregulated durin... 2 2 6.2% 8.91E-5 48969
[View Peptides]   TIF4632 Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) that al... 2 2 6.1% 4.22E-5 103899
[View Peptides]   DSL1 Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; forms a complex with Sec39p a... 2 3 6.1% 7.68E-5 88072
[View Peptides]   BEM2 Rho GTPase activating protein (RhoGAP) involved in the control of cytoskeleton organization and cell... 7 9 6.0% 8.01E-5 245428
[View Peptides]   ESC1 Protein localized to the nuclear periphery, involved in telomeric silencing; interacts with PAD4-dom... 4 4 6.0% 4.65E-5 187137
[View Peptides]   gi|2315262 gi|2315262|emb|CAA99092.1| IRA2 [Saccharomyces cerevisiae] 2 3 6.0% 5.28E-5 126813
[View Peptides]   JSN1 Member of the Puf family of RNA-binding proteins, interacts with mRNAs encoding membrane-associated ... 3 3 6.0% 5.31E-5 120374
[View Peptides]   CEX1 Cytoplasmic component of the nuclear aminoacylation-dependent tRNA export pathway; interacts with nu... 3 4 6.0% 1.01E-4 84769
[View Peptides]   PBP1 Component of glucose deprivation induced stress granules, involved in P-body-dependent granule assem... 2 2 6.0% 5.34E-5 78782
[View Peptides]   VPS17 Subunit of the membrane-associated retromer complex essential for endosome-to-Golgi retrograde prote... 2 2 6.0% 7.0E-5 63204
[View Peptides]   SVL3 Protein of unknown function, mutant phenotype suggests a potential role in vacuolar function; green ... 2 2 5.9% 4.68E-5 92144
[View Peptides]   TSL1 Large subunit of trehalose 6-phosphate synthase (Tps1p)/phosphatase (Tps2p) complex, which converts ... 3 3 5.8% 5.27E-5 123018
[View Peptides]   SSL2 Component of the holoenzyme form of RNA polymerase transcription factor TFIIH, has DNA-dependent ATP... 2 2 5.8% 4.58E-5 95341
[View Peptides]   RAD24 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints; ... 2 3 5.8% 8.78E-5 75727
[View Peptides]   PKH2 Serine/threonine protein kinase involved in sphingolipid-mediated signaling pathway that controls en... 3 4 5.7% 7.14E-5 121660
[View Peptides]   TRM2 tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a... 2 2 5.7% 6.25E-5 70288
[View Peptides]   SIR2 Conserved NAD+ dependent histone deacetylase of the Sirtuin family involved in regulation of lifespa... 2 2 5.7% 6.87E-5 63262
[View Peptides]   AGP3 Low-affinity amino acid permease, may act to supply the cell with amino acids as nitrogen source in ... 2 2 5.7% 6.92E-5 61052
[View Peptides]   PIK1 Phosphatidylinositol 4-kinase; catalyzes first step in the biosynthesis of phosphatidylinositol-4,5-... 3 8 5.6% 1.45E-4 119923
[View Peptides]   SIZ1 SUMO/Smt3 ligase that promotes the attachment of sumo (Smt3p; small ubiquitin-related modifier) to p... 3 3 5.6% 6.4E-5 100796
[View Peptides]   YIL169C Putative protein of unknown function; serine/threonine rich and highly similar to YOL155C, a putativ... 2 2 5.6% 3.88E-5 99736
[View Peptides]   PUF3 Protein of the mitochondrial outer surface, links the Arp2/3 complex with the mitochore during anter... 2 3 5.6% 6.59E-5 98068
[View Peptides]   KAP123 Karyopherin beta, mediates nuclear import of ribosomal proteins prior to assembly into ribosomes and... 3 3 5.5% 5.2E-5 122601
[View Peptides]   ESC2 Protein involved in silencing; may recruit or stabilize Sir proteins; role in Rad51-dependent homolo... 2 2 5.5% 8.46E-5 52542
[View Peptides]   EAF1 Component of the NuA4 histone acetyltransferase complex; acts as a platform for assembly of NuA4 sub... 2 2 5.4% 3.93E-5 112502
[View Peptides]   ATG1 Protein ser/thr kinase required for vesicle formation in autophagy and the cytoplasm-to-vacuole targ... 3 3 5.4% 6.45E-5 101717
[View Peptides]   MNN1 Alpha-1,3-mannosyltransferase, integral membrane glycoprotein of the Golgi complex, required for add... 2 2 5.4% 5.06E-5 88529
[View Peptides]   TOF2 Protein required for rDNA silencing and mitotic rDNA condensation; stimulates Cdc14p phosphatase act... 2 2 5.4% 5.01E-5 86366
[View Peptides]   DNA2 Tripartite DNA replication factor with single-stranded DNA-dependent ATPase, ATP-dependent nuclease,... 3 5 5.3% 6.34E-5 171694
[View Peptides]   ECM21 Protein involved in regulating the endocytosis of plasma membrane proteins; identified as a substrat... 4 4 5.3% 7.17E-5 119345
[View Peptides]   KHA1 Putative K+/H+ antiporter with a probable role in intracellular cation homeostasis, localized to Gol... 2 3 5.3% 6.63E-5 97111
[View Peptides]   SET3 Defining member of the SET3 histone deacetylase complex which is a meiosis-specific repressor of spo... 2 4 5.3% 1.03E-4 85480
[View Peptides]   YNL095C Putative protein of unknown function predicted to contain a transmembrane domain; YNL095C is not an ... 2 4 5.3% 1.2E-4 71196
[View Peptides]   ACK1 Protein that functions upstream of Pkc1p in the cell wall integrity pathway; GFP-fusion protein expr... 2 2 5.3% 6.19E-5 69371
[View Peptides]   PRI2 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair 2 2 5.3% 7.31E-5 62263
[View Peptides]   gi|2326814 gi|2326814|emb|CAA99286.1| unnamed protein product [Saccharomyces cerevisiae] 2 2 5.3% 9.67E-5 46221
[View Peptides]   BRR2 RNA-dependent ATPase RNA helicase (DEIH box); required for disruption of U4/U6 base-pairing in nativ... 5 8 5.2% 7.14E-5 246183
[View Peptides]   POL1 Catalytic subunit of the DNA polymerase I alpha-primase complex, required for the initiation of DNA ... 3 3 5.2% 3.94E-5 166809
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 2 3 5.2% 6.87E-5 93289
[View Peptides]   SEC23 GTPase-activating protein, stimulates the GTPase activity of Sar1p; component of the Sec23p-Sec24p h... 2 3 5.2% 7.54E-5 85385
[View Peptides]   PEP7 Multivalent adaptor protein that facilitates vesicle-mediated vacuolar protein sorting by ensuring h... 2 3 5.2% 1.12E-4 59443
[View Peptides]   GCN1 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn20p; proposed to stimulate ... 6 6 5.1% 4.33E-5 296697
[View Peptides]   SMC4 Subunit of the condensin complex; reorganizes chromosomes during cell division; forms a complex with... 4 4 5.1% 5.44E-5 162188
[View Peptides]   NET1 Core subunit of the RENT complex, which is a complex involved in nucleolar silencing and telophase e... 2 2 5.1% 3.25E-5 128531
[View Peptides]   YEL047C Soluble fumarate reductase, required with isoenzyme Osm1p for anaerobic growth; may interact with ri... 2 2 5.1% 8.21E-5 50844
[View Peptides]   POL2 Catalytic subunit of DNA polymerase (II) epsilon, a chromosomal DNA replication polymerase that exhi... 6 7 5.0% 6.08E-5 255669
[View Peptides]   PSD2 Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes, converts phosphatidylserine to... 3 4 5.0% 6.78E-5 130065
[View Peptides]   KSP1 Ser/thr protein kinase; nuclear translocation required for haploid filamentous growth; regulates fil... 4 6 5.0% 1.13E-4 117082
[View Peptides]   gi|130196, gi|41... pir||A29457 PIF1 protein precursor - yeast (Saccharomyces cerevisiae), gi|4178|emb|CAA28953.1| unnam... 2 2 5.0% 4.5E-5 97481
[View Peptides]   ADE5,7 Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic pathway, contains aminoimidazole... 2 2 5.0% 4.81E-5 86068
[View Peptides]   TOK1 Outward-rectifier potassium channel of the plasma membrane with two pore domains in tandem, each of ... 2 2 4.9% 5.58E-5 77408
[View Peptides]   YFR016C Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 3 3 4.8% 4.69E-5 137698
[View Peptides]   RIA1 Cytoplasmic GTPase involved in biogenesis of the 60S ribosome; has similarity to translation elongat... 3 3 4.8% 5.21E-5 124464
[View Peptides]   TFC4 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part... 4 4 4.8% 7.53E-5 120229
[View Peptides]   GIS1 JmjC domain-containing histone demethylase; transcription factor involved in the expression of genes... 2 2 4.8% 4.32E-5 99481
[View Peptides]   LEU9 Alpha-isopropylmalate synthase II (2-isopropylmalate synthase), catalyzes the first step in the leuc... 2 2 4.8% 6.39E-5 67200
[View Peptides]   BNI1 Formin, nucleates the formation of linear actin filaments, involved in cell processes such as buddin... 4 4 4.7% 3.95E-5 219701
[View Peptides]   CTF18 Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required ... 2 2 4.7% 5.21E-5 84373
[View Peptides]   POL12 B subunit of DNA polymerase alpha-primase complex, required for initiation of DNA replication during... 2 2 4.7% 5.47E-5 78774
[View Peptides]   YMR317W Putative protein of unknown function with some similarity to sialidase from Trypanosoma; YMR317W is ... 2 2 4.6% 3.39E-5 113071
[View Peptides]   FIG4 Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase; required for efficient mating and ... 2 5 4.6% 1.1E-4 101746
[View Peptides]   BUD27 Protein involved in bud-site selection, nutrient signaling, and gene expression controlled by TOR ki... 2 2 4.6% 4.85E-5 91422
[View Peptides]   YND1 Apyrase with wide substrate specificity, involved in preventing the inhibition of glycosylation by h... 2 2 4.6% 6.13E-5 71852
[View Peptides]   MKS1 Pleiotropic negative transcriptional regulator involved in Ras-CAMP and lysine biosynthetic pathways... 2 3 4.6% 9.91E-5 65643
[View Peptides]   SEC24 Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, required for cargo selection d... 2 2 4.5% 4.17E-5 103635
[View Peptides]   COG6 Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tethering com... 2 2 4.5% 4.6E-5 96976
[View Peptides]   PAN2 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tai... 3 3 4.4% 5.19E-5 127039
[View Peptides]   YBR235W Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family; Y... 2 2 4.4% 3.45E-5 123998
[View Peptides]   YPR089W Protein of unknown function; exhibits genetic interaction with ERG11 and protein-protein interaction... 2 2 4.4% 4.35E-5 102578
[View Peptides]   HSF1 Trimeric heat shock transcription factor, activates multiple genes in response to stresses that incl... 2 2 4.4% 4.63E-5 93282
[View Peptides]   NPR1 Protein kinase that stabilizes several plasma membrane amino acid transporters by antagonizing their... 2 2 4.4% 4.88E-5 85990
[View Peptides]   YOR088W YOR088W SGDID:S0005614, Chr XV from 488286-489734 2 2 4.4% 8.01E-5 55730
[View Peptides]   PDRB_YEAST, PDR1... (P40550) ATP-dependent permease PDR11, (P40550) ATP-dependent permease PDR11 3 3 4.3% 4.11E-5 160406
[View Peptides]   CIN8 Kinesin motor protein involved in mitotic spindle assembly and chromosome segregation 2 2 4.3% 3.72E-5 117999
[View Peptides]   ASE1 Mitotic spindle midzone localized microtubule-associated protein (MAP) family member; required for s... 2 2 4.3% 4.36E-5 101624
[View Peptides]   SAP1 Putative ATPase of the AAA family, interacts with the Sin1p transcriptional repressor in the two-hyb... 2 2 4.3% 4.3E-5 100332
[View Peptides]   CFT2 Subunit of the mRNA cleavage and polyadenlylation factor (CPF); required for pre-mRNA cleavage, poly... 2 2 4.3% 4.49E-5 96254
[View Peptides]   YKL187C Putative protein of unknown function; the authentic, non-tagged protein is detected in a phosphoryla... 2 2 4.3% 5.15E-5 81033
[View Peptides]   RLM1 MADS-box transcription factor, component of the protein kinase C-mediated MAP kinase pathway involve... 2 2 4.3% 5.71E-5 73484
[View Peptides]   CAF130 Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex involved in control... 2 2 4.2% 3.44E-5 128780
[View Peptides]   RGC1 Pleckstrin homology domain containing protein proposed to function as a glycerol channel activator; ... 2 2 4.2% 3.56E-5 120395
[View Peptides]   CWH43 Putative sensor/transporter protein involved in cell wall biogenesis; contains 14-16 transmembrane s... 2 2 4.2% 4.05E-5 107883
[View Peptides]   ATG2 Peripheral membrane protein required for vesicle formation during autophagy, pexophagy, and the cyto... 3 4 4.1% 4.85E-5 178413
[View Peptides]   TFC3 Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); ... 2 2 4.1% 3.33E-5 132108
[View Peptides]   MTR4 ATP-dependent 3'-5' RNA helicase, involved in nuclear RNA processing and degredation both as a compo... 2 2 4.1% 3.6E-5 122055
[View Peptides]   VPS3 Component of CORVET tethering complex; cytoplasmic protein required for the sorting and processing o... 2 4 4.1% 7.63E-5 116922
[View Peptides]   PUF4 Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that ... 2 2 4.1% 4.35E-5 97798
[View Peptides]   GDH2 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate; exp... 2 2 4.0% 3.53E-5 124332
[View Peptides]   gi|626825, gi|45... gi|730723|sp|P11792|SCH9_YEAST Serine/threonine-protein kinase SCH9, pir||S48986 probable protein ki... 2 2 4.0% 4.69E-5 91680
[View Peptides]   KEL3 Cytoplasmic protein of unknown function 2 3 4.0% 8.89E-5 75433
[View Peptides]   MYO1 Type II myosin heavy chain, required for wild-type cytokinesis and cell separation; localizes to the... 4 4 3.9% 4.0E-5 223634
[View Peptides]   HSL1 Nim1p-related protein kinase that regulates the morphogenesis and septin checkpoints; associates wit... 2 2 3.9% 2.54E-5 169592
[View Peptides]   TRS120 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates... 2 4 3.9% 5.99E-5 147662
[View Peptides]   VAC7 Integral vacuolar membrane protein involved in vacuole inheritance and morphology; activates Fab1p k... 2 2 3.9% 3.31E-5 128140
[View Peptides]   ADY3 Protein required for spore wall formation, thought to mediate assembly of a Don1p-containing structu... 2 3 3.9% 7.33E-5 91740
[View Peptides]   ENT2 Epsin-like protein required for endocytosis and actin patch assembly and functionally redundant with... 2 2 3.9% 6.3E-5 71807
[View Peptides]   UBR1 E3 ubiquitin ligase (N-recognin), forms heterodimer with Rad6p to ubiquitinate substrates in the N-e... 3 3 3.8% 2.97E-5 224836
[View Peptides]   CHC1 Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport ... 3 3 3.8% 3.5E-5 187233
[View Peptides]   ECM30 Non-essential protein of unknown function 2 2 3.8% 3.03E-5 145052
[View Peptides]   TAF1 TFIID subunit (145 kDa), involved in RNA polymerase II transcription initiation; possesses in vitro ... 2 2 3.8% 3.62E-5 120696
[View Peptides]   STE20 Cdc42p-activated signal transducing kinase of the PAK (p21-activated kinase) family; involved in phe... 2 2 3.8% 4.11E-5 102362
[View Peptides]   BUD7 Member of the ChAPs family of proteins (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), t... 2 2 3.8% 5.17E-5 84830
[View Peptides]   YJL225C Putative protein of unknown function; similarity to DNA helicases that are also encoded within subte... 3 5 3.7% 5.49E-5 197564
[View Peptides]   YIL177C Putative protein of unknown function; similarity to DNA helicases that are encoded within subtelomer... 3 5 3.7% 5.49E-5 197511
[View Peptides]   YSP1 Mitochondrial protein with a potential role in promoting mitochondrial fragmentation during programm... 2 2 3.7% 3.14E-5 143583
[View Peptides]   RRP12 Protein required for export of the ribosomal subunits; associates with the RNA components of the pre... 2 2 3.7% 3.14E-5 137508
[View Peptides]   ROM1 GDP/GTP exchange protein (GEP) for Rho1p; mutations are synthetically lethal with mutations in rom2,... 2 2 3.7% 3.34E-5 131392
[View Peptides]   FLO10 Lectin-like protein with similarity to Flo1p, thought to be involved in flocculation 2 3 3.7% 4.95E-5 122164
[View Peptides]   ULP2 Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins, plays a role in chromosome cohesion ... 2 3 3.7% 5.6E-5 116882
[View Peptides]   KGD1 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step... 2 2 3.7% 3.81E-5 114416
[View Peptides]   ECM22 Sterol regulatory element binding protein, regulates transcription of sterol biosynthetic genes; con... 2 2 3.7% 4.74E-5 89286
[View Peptides]   YRF1-8, YRF1-5, ... One of several telomeric Y' element-encoded DNA helicases, known as Y'-Help1 (Y'-HELicase Protein 1)... 3 5 3.6% 5.37E-5 203780
[View Peptides]   FAS2 Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty ... 2 2 3.6% 2.05E-5 206945
[View Peptides]   FIG2 Cell wall adhesin, expressed specifically during mating; may be involved in maintenance of cell wall... 2 3 3.6% 3.6E-5 166036
[View Peptides]   SMC2 Subunit of the condensin complex; essential SMC chromosomal ATPase family member that forms a comple... 2 2 3.6% 3.3E-5 133928
[View Peptides]   TMA108 Protein that associates with ribosomes; putative metalloprotease 2 4 3.6% 8.16E-5 107723
[View Peptides]   TBF1 Telobox-containing general regulatory factor; binds to TTAGGG repeats within subtelomeric anti-silen... 2 4 3.6% 1.37E-4 62824
[View Peptides]   RIM15 Glucose-repressible protein kinase involved in signal transduction during cell proliferation in resp... 3 3 3.4% 3.27E-5 196530
[View Peptides]   STU1 Component of the mitotic spindle that binds to interpolar microtubules via its association with beta... 2 17 3.4% 2.17E-4 174176
[View Peptides]   TSC11 Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p), a membrane-associated complex that regulates... 3 3 3.4% 4.05E-5 164368
[View Peptides]   MHP1 Microtubule-associated protein involved in assembly and stabilization of microtubules; overproductio... 3 5 3.4% 6.9E-5 155207
[View Peptides]   YPL216W Putative protein of unknown function; YPL216W is not an essential gene 2 2 3.4% 3.5E-5 128133
[View Peptides]   YPR097W Protein that contains a Phox homology (PX) domain and binds phosphoinositides; the authentic, non-ta... 2 2 3.4% 3.6E-5 123054
[View Peptides]   PUF2 Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that ... 2 2 3.4% 3.59E-5 119508
[View Peptides]   HMG1 One of two isozymes of HMG-CoA reductase that catalyzes the conversion of HMG-CoA to mevalonate, whi... 2 2 3.4% 3.66E-5 115625
[View Peptides]   SWI1 Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chr... 2 3 3.3% 4.41E-5 147937
[View Peptides]   SMC3 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells;... 3 3 3.3% 4.71E-5 141336
[View Peptides]   FLO9 Lectin-like protein with similarity to Flo1p, thought to be expressed and involved in flocculation 2 2 3.3% 2.92E-5 138072
[View Peptides]   NEW1 ATP binding cassette protein that cosediments with polysomes and is required for biogenesis of the s... 2 3 3.3% 4.84E-5 134331
[View Peptides]   YRM1 Zn2-Cys6 zinc-finger transcription factor that activates genes involved in multidrug resistance; par... 2 2 3.3% 4.91E-5 91084
[View Peptides]   AIM9 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi... 2 2 3.3% 6.15E-5 72414
[View Peptides]   GRX4 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase; monothiol glut... 2 4 3.3% 3.16E-4 27493
[View Peptides]   STT4 Phosphatidylinositol-4-kinase that functions in the Pkc1p protein kinase pathway; required for norma... 3 3 3.2% 3.05E-5 214605
[View Peptides]   MDS3 Protein with an N-terminal kelch-like domain, putative negative regulator of early meiotic gene expr... 2 2 3.2% 2.6E-5 167074
[View Peptides]   gi|17377416 gi|17377416|sp|P51979|HFM1_YEAST ATP-dependent DNA helicase MER3 (HFM1 protein) 2 2 3.2% 3.25E-5 135100
[View Peptides]   JJJ1 Co-chaperone that stimulates the ATPase activity of Ssa1p, required for a late step of ribosome biog... 2 2 3.2% 6.54E-5 68783
[View Peptides]   gi|171762, gi|124890 gi|171762|gb|AAA34710.1| IRA2 protein (IRA2) [Saccharomyces cerevisiae], gi|124890|sp|P19158|IRA2_YE... 4 6 3.1% 3.76E-5 351638
[View Peptides]   MLP2 Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the... 2 2 3.1% 2.3E-5 195140
[View Peptides]   NUP192 Essential structural subunit of the nuclear pore complex (NPC), localizes to the nuclear periphery o... 2 4 3.1% 4.59E-5 191534
[View Peptides]   STH1 ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic g... 3 3 3.1% 4.26E-5 156742
[View Peptides]   ECM16 Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP, predominantly nucleolar in ... 2 2 3.1% 3.05E-5 144954
[View Peptides]   SGD1 Essential nuclear protein, required for biogenesis of the small ribosomal subunit; has a possible ro... 2 2 3.1% 4.29E-5 102853
[View Peptides]   VMR1 Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 2 2 3.0% 2.42E-5 180925
[View Peptides]   TRM3 2'-O-ribose methyltransferase, catalyzes the ribose methylation of the guanosine nucleotide at posit... 2 3 3.0% 4.03E-5 165047
[View Peptides]   YHR080C Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 2 2 3.0% 2.87E-5 149679
[View Peptides]   MYO5 One of two type I myosins; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletio... 2 2 3.0% 3.17E-5 136899
[View Peptides]   FKS3 Protein involved in spore wall assembly, has similarity to 1,3-beta-D-glucan synthase catalytic subu... 2 2 2.9% 2.16E-5 207482
[View Peptides]   MYO2 One of two type V myosin motors (along with MYO4) involved in actin-based transport of cargos; requi... 3 3 2.9% 3.68E-5 180679
[View Peptides]   BEM3 Rho GTPase activating protein (RhoGAP) involved in control of the cytoskeleton organization; targets... 2 2 2.9% 3.42E-5 124913
[View Peptides]   SRO7 Effector of Rab GTPase Sec4p, forms a complex with Sec4p and t-SNARE Sec9p; involved in exocytosis a... 2 2 2.9% 3.74E-5 114513
[View Peptides]   gi|6686356, gi|2... gi|6686356|sp|P47098.2|YJ11B_YEAST RecName: Full=Transposon Ty1-JR1 Gag-Pol polyprotein; AltName: Fu... 3 3 2.8% 3.3E-5 198615
[View Peptides]   YER138C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 3 2.8% 3.3E-5 198561
[View Peptides]   ECM5 Non-essential protein of unknown function, contains ATP/GTP-binding site motif A; null mutant exhibi... 2 3 2.8% 4.1E-5 162700
[View Peptides]   YML133C Putative protein of unknown function with similarity to helicases; the authentic, non-tagged protein... 2 4 2.8% 5.62E-5 155553
[View Peptides]   CDC60 Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA 2 2 2.8% 3.54E-5 124141
[View Peptides]   PTP3 Phosphotyrosine-specific protein phosphatase involved in the inactivation of mitogen-activated prote... 2 2 2.8% 4.16E-5 105251
[View Peptides]   DUR1,2 Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities, degrades urea ... 2 2 2.7% 2.1E-5 201830
[View Peptides]   gi|1945315, gi|1... gi|1945316|emb|CAA97035.1| TY1B [Saccharomyces cerevisiae], gi|1945315|emb|CAA97027.1| TY1B [Sacchar... 2 2 2.7% 2.2E-5 198621
[View Peptides]   IML1 Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the vacuola... 2 2 2.7% 2.44E-5 181948
[View Peptides]   SWI4 DNA binding component of the SBF complex (Swi4p-Swi6p), a transcriptional activator that in concert ... 2 2 2.7% 3.53E-5 123806
[View Peptides]   YKL050C Protein of unknown function; the YKL050W protein is a target of the SCFCdc4 ubiquitin ligase complex... 2 3 2.7% 6.28E-5 103144
[View Peptides]   VID22 Glycosylated integral membrane protein localized to the plasma membrane; plays a role in fructose-1,... 2 2 2.7% 4.28E-5 102499
[View Peptides]   ACC1 Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to f... 3 3 2.6% 2.59E-5 250351
[View Peptides]   YRF1-2 Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking ... 2 4 2.6% 4.59E-5 190502
[View Peptides]   gi|914198, gi|11... gi|914198|gb|AAB34124.1| myosin I homolog/MYO3 gene product [Saccharomyces cerevisiae], gi|1171092|s... 2 2 2.6% 3.03E-5 142780
[View Peptides]   PIM1 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria; required ... 2 2 2.6% 3.41E-5 127112
[View Peptides]   YNL284C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.5% 2.2E-5 198997
[View Peptides]   RKR1 Nuclear RING domain protein with functional connections to chromatin modification; may interact with... 2 2 2.5% 2.47E-5 180185
[View Peptides]   SWR1 Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex, which exchanges histo... 2 2 2.5% 2.55E-5 174530
[View Peptides]   TCB3 Lipid-binding protein, localized to the bud via specific mRNA transport; non-tagged protein detected... 2 3 2.5% 3.75E-5 171075
[View Peptides]   YPL009C Protein of unknown function; may interact with ribosomes, based on co-purification experiments; gree... 2 2 2.5% 3.72E-5 119069
[View Peptides]   YRF1-6 Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking ... 2 4 2.4% 4.15E-5 211098
[View Peptides]   YRF1-3, YRF1-7 Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking ... 2 4 2.4% 4.15E-5 211114
[View Peptides]   SEN1 Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs; h... 2 2 2.3% 1.73E-5 252495
[View Peptides]   TOR1 PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in... 4 4 2.3% 3.12E-5 281138
[View Peptides]   YCF1 Vacuolar glutathione S-conjugate transporter of the ATP-binding cassette family, has a role in detox... 2 2 2.2% 2.55E-5 171120
[View Peptides]   PYC2 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly simi... 2 3 2.2% 4.91E-5 130167
[View Peptides]   YDR261C-D Retrotransposon TYA Gag and TYB Pol genes; in YDRCTY1-3 TYB is mutant and probably non-functional 2 2 2.2% 2.41E-5 181660
[View Peptides]   YOL103W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.1% 2.2E-5 198613
[View Peptides]   SGS1 Nucleolar DNA helicase of the RecQ family involved in genome integrity maintenance; regulates chromo... 2 2 2.1% 2.67E-5 163837
[View Peptides]   EF3A_YEAST (P16521) Elongation factor 3A (EF-3A) (EF-3) (Translation elongation factor 3A) (Eukaryotic elongati... 2 2 2.1% 3.7E-5 115862
[View Peptides]   gi|2120067, gi|7... gi|74627262|sp|Q12088.1|YL11B_YEAST RecName: Full=Transposon Ty1-LR1 Gag-Pol polyprotein; AltName: F... 2 2 2.1% 2.2E-5 198460
[View Peptides]   gi|2131099, gi|6... gi|6686357|sp|P47100|YJZ9_YEAST Transposon Ty1 protein B, gi|2131099|emb|CAA89556.1| TY1B [Saccharom... 2 2 2.1% 2.2E-5 198592
[View Peptides]   YBR012W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.1% 2.2E-5 198868
[View Peptides]   YER160C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.1% 2.2E-5 198568
[View Peptides]   YGR027W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.1% 2.2E-5 198656
[View Peptides]   YHR214C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.0% 2.15E-5 202816
[View Peptides]   YTA7 Protein that localizes to chromatin and has a role in regulation of histone gene expression; has a b... 2 2 2.0% 2.8E-5 157406
[View Peptides]   AKR1 Palmitoyl transferase involved in protein palmitoylation; acts as a negative regulator of pheromone ... 2 2 2.0% 5.05E-5 85840
[View Peptides]   CYR1 Adenylate cyclase, required for cAMP production and cAMP-dependent protein kinase signaling; the cAM... 2 2 1.9% 1.9E-5 227832
[View Peptides]   CDC25 Membrane bound guanine nucleotide exchange factor (GEF or GDP-release factor); indirectly regulates ... 3 3 1.9% 3.64E-5 179091
[View Peptides]   ARO1 Pentafunctional arom protein, catalyzes steps 2 through 6 in the biosynthesis of chorismate, which i... 2 2 1.9% 2.43E-5 174754
[View Peptides]   MMS22 Protein that acts with Mms1p in a repair pathway that may be involved in resolving replication inter... 2 2 1.9% 2.65E-5 167682
[View Peptides]   TOM1 E3 ubiquitin ligase of the hect-domain class; has a role in mRNA export from the nucleus and may reg... 3 3 1.7% 1.77E-5 374186
[View Peptides]   FMP27 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi... 2 2 1.7% 1.47E-5 303478
[View Peptides]   SNT2 DNA binding protein with similarity to the S. pombe Snt2 protein; computational analysis suggests a ... 2 2 1.7% 2.75E-5 163203
[View Peptides]   BLM10 Proteasome activator subunit; found in association with core particles, with and without the 19S reg... 2 2 1.6% 2.14E-5 207614
[View Peptides]   DYN1 Cytoplasmic heavy chain dynein, microtubule motor protein, required for anaphase spindle elongation;... 3 3 1.5% 1.41E-5 471351
[View Peptides]   MEC1 Genome integrity checkpoint protein and PI kinase superfamily member; signal transducer required for... 2 2 1.5% 1.63E-5 273340
[View Peptides]   YKL105C Putative protein of unknown function 2 2 1.5% 3.41E-5 125593
[View Peptides]   IRA1 GTPase-activating protein that negatively regulates RAS by converting it from the GTP- to the GDP-bo... 2 2 1.4% 1.25E-5 350980
[View Peptides]   SSK2 MAP kinase kinase kinase of the HOG1 mitogen-activated signaling pathway; interacts with Ssk1p, lead... 2 2 1.3% 2.44E-5 180527
[View Peptides]   NUM1 Protein required for nuclear migration, localizes to the mother cell cortex and the bud tip; may med... 2 2 1.2% 1.4E-5 313032
[View Peptides]   VPS13 Protein of unknown function; heterooligomeric or homooligomeric complex; peripherally associated wit... 2 2 1.0% 1.23E-5 357850

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle