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Protein Overview: SGS1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SGS1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..134] deduced N/A No confident structure predictions are available.
2 View Details [135..654] MSA 8.466997 View MSA. No confident structure predictions are available.
3 View Details [655..867] PSI-BLAST 197.9691 Putative DEAD box RNA helicase
4 View Details [868..1017] PSI-BLAST 197.9691 Putative DEAD box RNA helicase
5 View Details [1018..1156] PSI-BLAST 14.69897 Nucleotide excision repair enzyme UvrB
6 View Details [1157..1269] deduced N/A Confident ab initio structure predictions are available.
7 View Details [1270..1373] PSI-BLAST 405.440336 HRDC domain from RecQ helicase
8 View Details [1374..1447] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5
Term Confidence Notes
  • DNA-directed RNA polymerase activity
  • 3.24179656806626 bayes_pls_golite062009
  • RNA polymerase activity
  • 3.24179656806626 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 2.86764755795127 bayes_pls_golite062009
  • transcription regulator activity
  • 2.21457679362657 bayes_pls_golite062009
  • histone acetyltransferase activity
  • 1.94584323396575 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
  • 1.94584323396575 bayes_pls_golite062009
  • binding
  • 1.9212205923594 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.68565168715612 bayes_pls_golite062009
  • DNA helicase activity
  • 1.46069986266132 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 1.34255479264918 bayes_pls_golite062009
  • catalytic activity
  • 1.17990683373825 bayes_pls_golite062009
  • hydrolase activity
  • 1.08890095536803 bayes_pls_golite062009
  • endonuclease activity
  • 0.876142054476658 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.54480131475963 bayes_pls_golite062009
  • protein binding
  • 0.497114544861103 bayes_pls_golite062009
  • ribonuclease activity
  • 0.35631508447468 bayes_pls_golite062009
  • helicase activity
  • 0.112889920470041 bayes_pls_golite062009
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle