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Protein Overview: HDA2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data HDA2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..59] deduced N/A No confident structure predictions are available.
2 View Details [60..391] PSI-BLAST 17.154902 Heavy meromyosin subfragment
3 View Details [392..498] PSI-BLAST 8.69897 Tropomyosin
4 View Details [499..674] MSA 4.212997 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • protein deacetylase activity
  • 6.89067246450687 bayes_pls_golite062009
  • histone deacetylase activity
  • 6.72973102400173 bayes_pls_golite062009
  • deacetylase activity
  • 6.17788760083229 bayes_pls_golite062009
  • transcription regulator activity
  • 5.13863038737912 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
  • 5.08778624990141 bayes_pls_golite062009
  • DNA binding
  • 4.66369707598026 bayes_pls_golite062009
  • nucleic acid binding
  • 4.51452285155271 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
  • 4.31765999651746 bayes_pls_golite062009
  • transcription factor activity
  • 4.06706589695599 bayes_pls_golite062009
  • transcription repressor activity
  • 3.55154985983449 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 3.16896789933192 bayes_pls_golite062009
  • binding
  • 3.02779747447702 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.41271657675151 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
  • 1.90369937566383 bayes_pls_golite062009
  • histone acetyltransferase activity
  • 1.90369937566383 bayes_pls_golite062009
  • transcription activator activity
  • 1.77700860354597 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 1.73068440195944 bayes_pls_golite062009
  • chromatin binding
  • 1.68956710349366 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 1.62096064323298 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.49423102874486 bayes_pls_golite062009
  • transcription factor binding
  • 1.40653841901929 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.84983974758882 bayes_pls_golite062009
  • protein binding
  • 0.830419844171551 bayes_pls_golite062009
  • N-acyltransferase activity
  • 0.712553030350746 bayes_pls_golite062009
  • histone binding
  • 0.557787598121402 bayes_pls_golite062009
  • N-acetyltransferase activity
  • 0.474709214154094 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.2679415219517 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.141400887946529 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle