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Protein Overview: RAD16

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RAD16 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..82] deduced N/A No confident structure predictions are available.
2 View Details [83..133] PSI-BLAST 2.39794 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
3 View Details [134..368] PSI-BLAST 2.39794 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
4 View Details [369..528] deduced N/A No confident structure predictions are available.
5 View Details [529..790] PSI-BLAST 13.522879 Putative DEAD box RNA helicase

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 5.98960927712678 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 5.74178173377247 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 5.13930231819025 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 5.02047466767105 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 2.72222787956584 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 2.60873257753475 bayes_pls_golite062009
  • hydrolase activity
  • 2.55157966585974 bayes_pls_golite062009
  • binding
  • 2.4974940028864 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 2.16381244011837 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.13284212711072 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 2.11265775498161 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 2.11046854230259 bayes_pls_golite062009
  • endonuclease activity
  • 1.96689197136388 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • ATPase activity
  • 1.53315090215319 bayes_pls_golite062009
  • ligase activity
  • 1.31241138156276 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 1.2935968641033 bayes_pls_golite062009
  • ribonucleotide binding
  • 1.2935353851804 bayes_pls_golite062009
  • purine nucleotide binding
  • 1.29138695385133 bayes_pls_golite062009
  • nucleotide binding
  • 1.28669586915546 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.2539059700735 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2155186842031 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.117585097627 bayes_pls_golite062009
  • nucleic acid binding
  • 1.08697924060619 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • ATP binding
  • 0.98146619596929 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.949788783884952 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.931486373329219 bayes_pls_golite062009
  • DNA helicase activity
  • 0.72881469450553 bayes_pls_golite062009
  • DNA binding
  • 0.702147676354075 bayes_pls_golite062009
  • motor activity
  • 0.677658554107 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.5886142102548 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.568457189190858 bayes_pls_golite062009
  • protein binding
  • 0.378225828131122 bayes_pls_golite062009
  • mismatched DNA binding
  • 0.31144582840038 bayes_pls_golite062009
  • transcription regulator activity
  • 0.287777990975748 bayes_pls_golite062009
  • DNA strand annealing activity
  • 0.283577486331079 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.176241137083092 bayes_pls_golite062009
  • microtubule motor activity
  • 0.11674780318211 bayes_pls_golite062009
  • kinase activity
  • 0.0980017568205789 bayes_pls_golite062009
  • protein kinase activity
  • 0.0364322017534667 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 5.98960927712678 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 5.74178173377247 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 5.13930231819025 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 5.02047466767105 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 2.72222787956584 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 2.60873257753475 bayes_pls_golite062009
  • hydrolase activity
  • 2.55157966585974 bayes_pls_golite062009
  • binding
  • 2.4974940028864 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 2.16381244011837 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.13284212711072 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 2.11265775498161 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 2.11046854230259 bayes_pls_golite062009
  • endonuclease activity
  • 1.96689197136388 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • ATPase activity
  • 1.53315090215319 bayes_pls_golite062009
  • ligase activity
  • 1.31241138156276 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 1.2935968641033 bayes_pls_golite062009
  • ribonucleotide binding
  • 1.2935353851804 bayes_pls_golite062009
  • purine nucleotide binding
  • 1.29138695385133 bayes_pls_golite062009
  • nucleotide binding
  • 1.28669586915546 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.2539059700735 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2155186842031 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.117585097627 bayes_pls_golite062009
  • nucleic acid binding
  • 1.08697924060619 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • ATP binding
  • 0.98146619596929 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.949788783884952 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.931486373329219 bayes_pls_golite062009
  • DNA helicase activity
  • 0.72881469450553 bayes_pls_golite062009
  • DNA binding
  • 0.702147676354075 bayes_pls_golite062009
  • motor activity
  • 0.677658554107 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.5886142102548 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.568457189190858 bayes_pls_golite062009
  • protein binding
  • 0.378225828131122 bayes_pls_golite062009
  • mismatched DNA binding
  • 0.31144582840038 bayes_pls_golite062009
  • transcription regulator activity
  • 0.287777990975748 bayes_pls_golite062009
  • DNA strand annealing activity
  • 0.283577486331079 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.176241137083092 bayes_pls_golite062009
  • microtubule motor activity
  • 0.11674780318211 bayes_pls_golite062009
  • kinase activity
  • 0.0980017568205789 bayes_pls_golite062009
  • protein kinase activity
  • 0.0364322017534667 bayes_pls_golite062009
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle