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Protein Overview: RAD1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RAD1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..299] PSI-BLAST 12.522879 Initiation factor 4a
2 View Details [300..585] PSI-BLAST 3.0 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
3 View Details [586..742] PSI-BLAST 3.0 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
4 View Details [743..819] PSI-BLAST 28.0 Nucleotide excision repair enzyme UvrB
5 View Details [820..989] PSI-BLAST 113.28043 Putative ATP-dependent RNA helicase Hef, nuclease domain
6 View Details [990..1100] MSA 2.057993 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4
Term Confidence Notes
  • single-stranded DNA specific endodeoxyribonuclease activity
  • 12.5797089932289 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 7.65460057398582 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 6.8949486660401 bayes_pls_golite062009
  • endonuclease activity
  • 6.81743235298471 bayes_pls_golite062009
  • four-way junction helicase activity
  • 4.48421726286311 bayes_pls_golite062009
  • DNA helicase activity
  • 4.45575761476577 bayes_pls_golite062009
  • DNA strand annealing activity
  • 3.51692202399009 bayes_pls_golite062009
  • excinuclease ABC activity
  • 3.48615352002265 bayes_pls_golite062009
  • single-stranded DNA binding
  • 3.44605832131927 bayes_pls_golite062009
  • structure-specific DNA binding
  • 3.37084035853131 bayes_pls_golite062009
  • damaged DNA binding
  • 2.98078816242626 bayes_pls_golite062009
  • DNA binding
  • 2.97855002479178 bayes_pls_golite062009
  • helicase activity
  • 2.83648239124034 bayes_pls_golite062009
  • nucleic acid binding
  • 2.79236389919005 bayes_pls_golite062009
  • nuclease activity
  • 2.20113675721212 bayes_pls_golite062009
  • binding
  • 2.17324322139334 bayes_pls_golite062009
  • hydrolase activity
  • 2.07039693890326 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 1.69645042781713 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.26255690081743 bayes_pls_golite062009
  • transposase activity
  • 1.10140160488189 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 1.05548921907953 bayes_pls_golite062009
  • pyrophosphatase activity
  • 1.02983374615445 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 1.01049916010827 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 1.00920723797259 bayes_pls_golite062009
  • catalytic activity
  • 0.816447099398022 bayes_pls_golite062009
  • protein binding
  • 0.71091195096997 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle