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Bait Protein: ZDS1
Organism: Saccharomyces cerevisiae
Publication: McCusker D, Denison C, Anderson S, Egelhofer TA, Yates JR 3rd, Gygi SP, Kellogg DR. Cdk1 coordinates cell-surface growth with the cell cycle.Nat Cell Biol. 2007 May;9(5):506-15.
Comments: Sample 3 - cpn + atp, from june 2005

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  Hit Protein Protein Desc Sequence Count Spectrum Count Sequence Coverage NSAF Mol. Wt.
[View Peptides]   SPT4 Protein involved in the regulating Pol I and Pol II transcription, pre-mRNA processing, kinetochore ... 5 7 80.4% 0.0051 11158
[View Peptides]   CDC28 Catalytic subunit of the main cell cycle cyclin-dependent kinase (CDK); alternately associates with ... 50 300 80.2% 0.0748 34061
[View Peptides]   HS71_YEAST, HSP7... (P10591) Heat shock protein SSA1 (Heat shock protein YG100), (P10591) Heat shock protein SSA1 (Heat ... 63 535 76.6% 0.062 69526
[View Peptides]   HSP72_YEAST, HS7... (P10592) Heat shock protein SSA2, (P10592) Heat shock protein SSA2 54 322 71.0% 0.0375 69339
[View Peptides]   CLN2 G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S p... 51 452 67.7% 0.0616 61697
[View Peptides]   HS75_YEAST, HSP7... (P11484) Heat shock protein SSB1 (Cold-inducible protein YG101), (P11484) Heat shock protein SSB1 (C... 49 88 67.2% 0.0107 66470
[View Peptides]   HSP76_YEAST, HS7... (P40150) Heat shock protein SSB2, (P40150) Heat shock protein SSB2 48 81 63.7% 0.00983 66463
[View Peptides]   LPD1 Dihydrolipoamide dehydrogenase, the lipoamide dehydrogenase component (E3) of the pyruvate dehydroge... 20 60 55.3% 0.00893 54010
[View Peptides]   gi|159164567, gi... gi|66360349|pdb|1WR1|A Chain A, The Complex Sturcture Of Dsk2p Uba With Ubiquitin, gi|48429170|sp|P6... 7 18 55.3% 0.0176 8557
[View Peptides]   CKS1 Cyclin-dependent protein kinase regulatory subunit and adaptor; modulates proteolysis of M-phase tar... 11 195 54.0% 0.0966 17795
[View Peptides]   RPP2B Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction ... 8 15 53.6% 0.0101 11050
[View Peptides]   G3P3_YEAST (P00359) Glyceraldehyde-3-phosphate dehydrogenase 3 (EC 1.2.1.12) (GAPDH 3) 12 15 49.8% 0.00337 35615
[View Peptides]   CHC1 Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport ... 65 98 49.7% 0.0044 187233
[View Peptides]   KGD1 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step... 46 129 49.2% 0.00945 114416
[View Peptides]   VPS1 Dynamin-like GTPase required for vacuolar sorting; also involved in actin cytoskeleton organization,... 36 57 48.6% 0.00601 78736
[View Peptides]   GAL1_YEAST (P04385) Galactokinase (EC 2.7.1.6) (Galactose kinase) 20 33 48.6% 0.00465 57813
[View Peptides]   SSC1 Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitoc... 33 172 47.7% 0.0195 70628
[View Peptides]   HSP26_YEAST, HS2... (P15992) Heat shock protein 26 (26 kDa heat shock protein), (P15992) Heat shock protein 26 (26 kDa h... 11 27 46.9% 0.00942 23748
[View Peptides]   ZDS1 Protein that interacts with silencing proteins at the telomere, involved in transcriptional silencin... 69 194 44.5% 0.0157 103358
[View Peptides]   RVB2 Essential protein involved in transcription regulation; component of chromatin remodeling complexes;... 14 24 44.2% 0.00379 51612
[View Peptides]   KGD2 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase com... 23 54 44.1% 0.00866 50431
[View Peptides]   CMD1 Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, act... 3 3 43.5% 0.00152 16135
[View Peptides]   gi|49258827 gi|49258827|pdb|1S1H|H Chain H, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 5 6 43.4% 0.00346 14495
[View Peptides]   FAS1 Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty a... 74 125 43.3% 0.00453 228689
[View Peptides]   PFK2 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaero... 26 30 42.8% 0.00232 104618
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 17 77 42.6% 0.0125 50033
[View Peptides]   CLC1 Clathrin light chain, subunit of the major coat protein involved in intracellular protein transport ... 8 11 42.1% 0.00351 26532
[View Peptides]   FAS2 Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty ... 58 113 41.8% 0.00445 206945
[View Peptides]   HSP60 Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides... 27 61 41.6% 0.00792 60752
[View Peptides]   RPP2A Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction... 5 13 41.5% 0.00911 10746
[View Peptides]   gi|133003, gi|17... gi|173235|gb|AAA35236.1| 5S ribosomal RNA binding-protein [Saccharomyces cerevisiae], gi|173232|gb|A... 9 9 41.4% 0.00225 33743
[View Peptides]   PRE6 Alpha 4 subunit of the 20S proteasome; may replace alpha 3 subunit (Pre9p) under stress conditions t... 6 6 40.2% 0.00175 28439
[View Peptides]   GAL10 UDP-glucose-4-epimerase, catalyzes the interconversion of UDP-galactose and UDP-D-glucose in galacto... 21 27 39.3% 0.00287 78195
[View Peptides]   gi|49258842 gi|49258842|pdb|1S1I|D Chain D, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 7 8 39.3% 0.00165 38931
[View Peptides]   RL4A_YEAST (P10664) 60S ribosomal protein L4-A (L2A) (RP2) 7 8 39.3% 0.00165 38961
[View Peptides]   COX6 Subunit VI of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane... 4 4 38.5% 0.00201 17342
[View Peptides]   COG2 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tet... 5 5 37.5% 0.00135 31800
[View Peptides]   NDI1 NADH:ubiquinone oxidoreductase, transfers electrons from NADH to ubiquinone in the respiratory chain... 10 11 37.4% 0.00159 57250
[View Peptides]   R141_YEAST, RS14... (P06367) 40S ribosomal protein S14-A (RP59A), (P06367) 40S ribosomal protein S14-A (RP59A) 3 9 36.0% 0.00492 14405
[View Peptides]   RS14B_YEAST, R14... (P39516) 40S ribosomal protein S14-B (RP59B), (P39516) 40S ribosomal protein S14-B (RP59B) 3 9 35.8% 0.00488 14519
[View Peptides]   gi|22022642, gi|... gi|4371|emb|CAA30029.1| unnamed protein product [Saccharomyces cerevisiae], gi|22022642|emb|CAA31703... 15 26 35.6% 0.00619 33766
[View Peptides]   PFK1 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaer... 24 37 35.0% 0.00278 107970
[View Peptides]   RVB1 Essential protein involved in transcription regulation; component of chromatin remodeling complexes;... 11 15 34.6% 0.00241 50453
[View Peptides]   RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5) 7 9 34.2% 0.00257 29279
[View Peptides]   gi|49258866 gi|49258866|pdb|1S1I|9 Chain 9, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 2 2 34.1% 0.00163 9960
[View Peptides]   SEC13 Component of both the Nup84 nuclear pore sub-complex and the Sec13p-Sec31p complex of the COPII vesi... 6 7 34.0% 0.00175 33043
[View Peptides]   ACT1 Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functio... 8 12 33.9% 0.00238 41690
[View Peptides]   YDJ1 Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein trans... 10 13 33.3% 0.00236 44671
[View Peptides]   RPP1B Ribosomal protein P1 beta, component of the ribosomal stalk, which is involved in interaction of tra... 2 4 33.0% 0.0028 10668
[View Peptides]   HS74_YEAST, HSP7... (P22202) Heat shock protein SSA4, (P22202) Heat shock protein SSA4 29 127 32.8% 0.0147 69520
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 11 18 32.3% 0.00304 48953
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 11 18 32.3% 0.00304 48993
[View Peptides]   YDR098C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 11 18 32.3% 0.00304 49057
[View Peptides]   YGR027W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 11 18 32.3% 0.00304 49056
[View Peptides]   YJR028W Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 11 18 32.3% 0.00304 49112
[View Peptides]   YML045W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 11 18 32.3% 0.00304 49122
[View Peptides]   YDR261C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YDRCTY1-3 TYB is mutant and probably no... 11 18 32.3% 0.00304 49009
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 11 18 32.3% 0.00304 49129
[View Peptides]   gi|49258840 gi|49258840|pdb|1S1I|B Chain B, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 5 9 32.0% 0.00264 27277
[View Peptides]   MGE1 Mitochondrial matrix cochaperone, acts as a nucleotide release factor for Ssc1p in protein transloca... 5 6 31.6% 0.00195 26066
[View Peptides]   SRL3 Cytoplasmic protein that, when overexpressed, suppresses the lethality of a rad53 null mutation; pot... 8 18 31.6% 0.0088 17014
[View Peptides]   ACN9 Protein of the mitochondrial intermembrane space, required for acetate utilization and gluconeogenes... 2 2 31.6% 0.00112 15783
[View Peptides]   RS19B_YEAST, R19... (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55), (P07281) 40S ribosomal protein S19-B (S16... 3 7 31.5% 0.00364 15760
[View Peptides]   R19A_YEAST, RS19... (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45), (P07280) 40S ribosomal protein S19... 3 7 31.5% 0.00364 15786
[View Peptides]   RS11_YEAST (P26781) 40S ribosomal protein S11 (S18) (YS12) (RP41) 6 6 31.0% 0.00288 17618
[View Peptides]   COX13 Subunit VIa of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membran... 2 4 31.0% 0.0023 15021
[View Peptides]   YMR31 Mitochondrial ribosomal protein of the small subunit, has similarity to human mitochondrial ribosoma... 2 3 30.9% 0.00181 13689
[View Peptides]   CCT8 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 10 11 30.1% 0.00144 61662
[View Peptides]   gi|49258841 gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 14 23 30.1% 0.00443 43626
[View Peptides]   gi|49258850 gi|49258850|pdb|1S1I|L Chain L, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 5 10 30.0% 0.00366 24291
[View Peptides]   RS5_YEAST (P26783) 40S ribosomal protein S5 (S2) (YS8) (RP14) 6 7 29.9% 0.00232 24907
[View Peptides]   PRE5 Alpha 6 subunit of the 20S proteasome 4 4 29.5% 0.00127 25604
[View Peptides]   MLC1 Essential light chain for Myo1p, light chain for Myo2p; stabilizes Myo2p by binding to the neck regi... 3 3 29.5% 0.0015 16444
[View Peptides]   SRB7 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 2 2 29.3% 0.00106 16071
[View Peptides]   YBR012W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 9 14 29.1% 0.00236 49068
[View Peptides]   gi|114575, gi|171110 gi|171110|gb|AAA34444.1| F1-ATPase beta-subunit precursor, sp|P00830|ATPB_YEAST ATP synthase beta ch... 9 10 29.0% 0.00145 54924
[View Peptides]   RS3_YEAST (P05750) 40S ribosomal protein S3 (YS3) (RP13) 6 9 28.9% 0.0028 26372
[View Peptides]   TIF34 eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for ... 7 7 28.8% 0.0015 38755
[View Peptides]   G3P2_YEAST (P00358) Glyceraldehyde-3-phosphate dehydrogenase 2 (EC 1.2.1.12) (GAPDH 2) 9 11 28.1% 0.00247 35716
[View Peptides]   SEC27 Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport... 20 30 27.9% 0.00251 99445
[View Peptides]   KAR2 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i... 17 21 27.7% 0.00229 74468
[View Peptides]   ATP1 Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily ... 11 13 27.7% 0.00177 58618
[View Peptides]   RS8_YEAST (P05754) 40S ribosomal protein S8 (S14) (YS9) (RP19) 4 5 27.6% 0.00187 22358
[View Peptides]   COP1 Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secr... 21 24 26.8% 0.00148 135607
[View Peptides]   RPN1_YEAST (P38764) 26S proteasome regulatory subunit RPN1 (Proteasome non-ATPase subunit 1) 20 27 26.6% 0.00202 109361
[View Peptides]   DEF1 RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot... 17 26 26.4% 0.00262 83973
[View Peptides]   VMA2 Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a... 8 10 26.1% 0.00144 57749
[View Peptides]   CDC10 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui... 5 6 26.1% 0.00138 37025
[View Peptides]   SEC28 Epsilon-COP subunit of the coatomer; regulates retrograde Golgi-to-ER protein traffic; stabilizes Co... 5 6 26.0% 0.00151 33829
[View Peptides]   RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP21) (YP28) 6 7 26.0% 0.00265 22312
[View Peptides]   SPT5 Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a compl... 19 23 25.6% 0.00161 115650
[View Peptides]   TPS1 Synthase subunit of trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storag... 9 11 25.5% 0.00165 56148
[View Peptides]   R15B_YEAST, RL15... (P54780) 60S ribosomal protein L15-B (YL10) (L13) (RP15R) (YP18), (P54780) 60S ribosomal protein L15... 4 9 25.1% 0.00329 24291
[View Peptides]   CCT2 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assemb... 8 8 24.7% 0.00113 57203
[View Peptides]   gi|130685, gi|4195 gi|4195|emb|CAA26184.1| unnamed protein product [Saccharomyces cerevisiae], sp|P04840|POR1_YEAST Out... 5 5 24.7% 0.00131 30429
[View Peptides]   MDJ1 Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p; involved in protein fol... 7 8 24.1% 0.00116 55561
[View Peptides]   MET8 Bifunctional dehydrogenase and ferrochelatase, involved in the biosynthesis of siroheme, a prostheti... 4 6 24.1% 0.00163 31918
[View Peptides]   RPT2 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 5 7 24.0% 0.00119 48828
[View Peptides]   RS13_YEAST (P05756) 40S ribosomal protein S13 (S27A) (YS15) 3 3 23.3% 0.00149 16898
[View Peptides]   gi|729488 gi|729488|sp|P39676|FHP_YEAST Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric o... 4 4 23.1% 7.45E-4 44647
[View Peptides]   YHB1 Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification; plays a role i... 4 4 23.1% 7.45E-4 44646
[View Peptides]   RTN1 ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subu... 4 4 23.1% 0.00101 32916
[View Peptides]   gi|6730174, gi|6... gi|6730177|pdb|1CK8|B Chain B, Rpl30-Mrna Complex From Yeast, gi|6730174|pdb|1CK5|B Chain B, Ribosom... 2 4 23.1% 0.00286 11284
[View Peptides]   PUP3 Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism; human homolog is su... 3 3 22.4% 0.00109 22605
[View Peptides]   gi|49258860 gi|49258860|pdb|1S1I|V Chain V, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 3 3 22.3% 0.00151 16591
[View Peptides]   SCL1 Alpha 1 subunit of the 20S proteasome involved in the degradation of ubiquitinated substrates; 20S p... 4 4 22.2% 0.00118 28001
[View Peptides]   FIN1 Spindle pole body-related intermediate filament protein; forms cell cycle-specific filaments between... 5 9 22.0% 0.0023 33186
[View Peptides]   TUB1 Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form... 6 7 21.9% 0.00116 49800
[View Peptides]   RIP1 Ubiquinol-cytochrome-c reductase, a Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 c... 4 4 21.9% 0.00138 23365
[View Peptides]   CDC48 ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p a... 10 18 21.7% 0.0016 91996
[View Peptides]   CYPH_YEAST (P14832) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosp... 2 2 21.7% 9.23E-4 17259
[View Peptides]   gi|15988133, gi|... gi|15988137|pdb|1ID3|F Chain F, Crystal Structure Of The Yeast Nucleosome Core Particle Reveals Fund... 2 2 21.6% 0.00146 11237
[View Peptides]   RPD3 Histone deacetylase; regulates transcription and silencing; plays a role in regulating Ty1 transposi... 6 6 21.5% 0.00103 48904
[View Peptides]   HAP2 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex, a transcripti... 2 2 21.5% 5.61E-4 29867
[View Peptides]   ACC1 Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to f... 31 34 21.4% 0.00113 250351
[View Peptides]   GAL7_YEAST (P08431) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) (Gal-1-P uridylyltransferase) (UDP-... 4 4 21.1% 8.14E-4 42254
[View Peptides]   G3P1_YEAST (P00360) Glyceraldehyde-3-phosphate dehydrogenase 1 (EC 1.2.1.12) (GAPDH 1) 5 7 20.5% 0.00157 35619
[View Peptides]   TSA1_YEAST (P34760) Peroxiredoxin TSA1 (EC 1.11.1.15) (Thioredoxin peroxidase) (Cytoplasmic thiol peroxidase 1)... 3 3 20.5% 0.00114 21459
[View Peptides]   RPT5 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 6 6 20.3% 0.00103 48256
[View Peptides]   BMH1_YEAST (P29311) Protein BMH1 4 4 20.3% 0.00112 29960
[View Peptides]   NHP2 Nuclear protein related to mammalian high mobility group (HMG) proteins, essential for function of H... 2 2 20.2% 8.59E-4 18870
[View Peptides]   DPM1 Dolichol phosphate mannose (Dol-P-Man) synthase of the ER membrane, catalyzes the formation of Dol-P... 3 4 19.9% 0.00111 30362
[View Peptides]   RL25_YEAST (P04456) 60S ribosomal protein L25 (YL25) (RP61L) 2 7 19.9% 0.00369 15626
[View Peptides]   ILV5 Acetohydroxyacid reductoisomerase, mitochondrial protein involved in branched-chain amino acid biosy... 4 5 19.7% 9.4E-4 44368
[View Peptides]   RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (YL5) (RP6) (Maintenance of killer protein 7) 7 7 19.6% 0.00204 27994
[View Peptides]   RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (YL5) (RP6) 8 8 19.6% 0.00233 27981
[View Peptides]   TUB2 Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymeriz... 5 6 19.5% 9.75E-4 50923
[View Peptides]   PRE9 Alpha 3 subunit of the 20S proteasome, the only nonessential 20S subunit; may be replaced by the alp... 2 2 19.4% 5.76E-4 28714
[View Peptides]   MPM1 Mitochondrial membrane protein of unknown function, contains no hydrophobic stretches 3 3 19.4% 8.84E-4 28470
[View Peptides]   CCT7 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 7 8 19.3% 0.00108 59736
[View Peptides]   MIR1 Mitochondrial phosphate carrier, imports inorganic phosphate into mitochondria; functionally redunda... 3 3 19.3% 7.17E-4 32812
[View Peptides]   RS2_YEAST (P25443) 40S ribosomal protein S2 (S4) (YS5) (RP12) (Omnipotent suppressor protein SUP44) 3 4 19.0% 0.00117 27319
[View Peptides]   SAP30 Subunit of a histone deacetylase complex, along with Rpd3p and Sin3p, that is involved in silencing ... 3 3 18.9% 0.00111 23026
[View Peptides]   NPL6 Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Ldb7p, and Htl1p to... 5 5 18.4% 8.54E-4 49651
[View Peptides]   THP2 Subunit of the THO complex, which connects transcription elongation and mitotic recombination, and o... 2 2 18.4% 5.69E-4 30299
[View Peptides]   COR1 Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex), which is a component of ... 4 6 18.2% 9.75E-4 50228
[View Peptides]   RS7A_YEAST (P26786) 40S ribosomal protein S7-A (RP30) 4 5 18.0% 0.00197 21491
[View Peptides]   LAT1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes... 5 6 17.8% 9.25E-4 51818
[View Peptides]   RPT4 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 6 6 17.8% 0.00102 49408
[View Peptides]   CDC12 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui... 5 6 17.7% 0.0011 46668
[View Peptides]   TAF6 Subunit (60 kDa) of TFIID and SAGA complexes, involved in transcription initiation of RNA polymerase... 5 5 17.6% 7.2E-4 57902
[View Peptides]   TUP1 General repressor of transcription, forms complex with Cyc8p, involved in the establishment of repre... 10 14 17.4% 0.00146 78308
[View Peptides]   MRPS35 Mitochondrial ribosomal protein of the small subunit 3 3 17.4% 6.46E-4 39575
[View Peptides]   SEC21 Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat... 10 12 17.1% 9.53E-4 104831
[View Peptides]   gi|464861, gi|45... gi|464861|sp|P33298.1|PRS6B_YEAST RecName: Full=26S protease regulatory subunit 6B homolog; AltName:... 5 6 17.1% 0.00104 47970
[View Peptides]   RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP21) (YP28) 4 4 17.0% 0.00153 22167
[View Peptides]   HEM15 Ferrochelatase, a mitochondrial inner membrane protein, catalyzes the insertion of ferrous iron into... 3 3 16.8% 5.67E-4 44596
[View Peptides]   SER2 Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthes... 3 3 16.8% 7.21E-4 34207
[View Peptides]   EDE1 Key endocytic protein involved in a network of interactions with other endocytic proteins, binds mem... 13 14 16.7% 7.53E-4 150783
[View Peptides]   ENO2_YEAST (P00925) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lya... 3 3 16.7% 5.11E-4 46783
[View Peptides]   RL6B_YEAST (P05739) 60S ribosomal protein L6-B (L17) (YL16) (RP18) 2 2 16.6% 8.49E-4 19855
[View Peptides]   gi|2914549, gi|1... gi|88192080|pdb|2AL1|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex At Ph 8.0, ... 3 3 16.5% 5.11E-4 46671
[View Peptides]   RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A) 3 4 16.5% 0.00117 28612
[View Peptides]   MNP1 Protein associated with the mitochondrial nucleoid; putative mitochondrial ribosomal protein with si... 2 3 16.5% 0.00115 20650
[View Peptides]   CCT4 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 6 7 16.3% 9.85E-4 57604
[View Peptides]   IDH2 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of... 3 3 16.3% 6.04E-4 39739
[View Peptides]   YEL057C Protein of unknown function involved in telomere maintenance; target of UME6 regulation 2 2 16.3% 6.38E-4 27229
[View Peptides]   PUP2 Alpha 5 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism; human homolog is s... 2 2 16.2% 5.71E-4 28617
[View Peptides]   LSM12 Protein of unknown function that may function in RNA processing; interacts with Pbp1p and Pbp4p and ... 2 2 16.0% 7.94E-4 21314
[View Peptides]   CDC36 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels including regu... 2 3 15.7% 0.00117 22363
[View Peptides]   ALF_YEAST (P14540) Fructose-bisphosphate aldolase (EC 4.1.2.13) 3 3 15.6% 6.22E-4 39490
[View Peptides]   TPS2 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the... 7 9 15.5% 7.46E-4 102976
[View Peptides]   TCP1 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol; inv... 5 5 15.4% 6.64E-4 60481
[View Peptides]   PRE7 Beta 6 subunit of the 20S proteasome 3 3 15.4% 9.25E-4 26871
[View Peptides]   SEC26 Essential beta-coat protein of the COPI coatomer, involved in ER-to-Golgi protein trafficking and ma... 12 13 15.3% 9.92E-4 109019
[View Peptides]   MGS1 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome; ... 3 3 15.3% 3.8E-4 66544
[View Peptides]   SAR1 GTPase, GTP-binding protein of the ARF family, component of COPII coat of vesicles; required for tra... 2 2 15.3% 7.82E-4 21451
[View Peptides]   PRT1 eIF3b subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati... 8 8 15.1% 7.79E-4 88130
[View Peptides]   WTM1 Transcriptional modulator involved in regulation of meiosis, silencing, and expression of RNR genes;... 3 3 15.1% 5.1E-4 48383
[View Peptides]   RS0B_YEAST (P46654) 40S ribosomal protein S0-B (Nucleic acid-binding protein NAB1B) 4 4 15.1% 0.00118 27831
[View Peptides]   RS0A_YEAST (P32905) 40S ribosomal protein S0-A (Nucleic acid-binding protein NAB1A) 4 4 15.1% 0.00118 27893
[View Peptides]   RSM10 Mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S10 ribosomal protei... 2 2 14.8% 7.32E-4 23424
[View Peptides]   BMH2_YEAST (P34730) Protein BMH2 3 3 14.7% 8.19E-4 30930
[View Peptides]   PAA1 Polyamine acetyltransferase; acetylates polyamines (e.g. putrescine, spermidine, spermine) and also ... 2 2 14.7% 7.78E-4 21947
[View Peptides]   RPT6 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 4 4 14.6% 7.34E-4 45272
[View Peptides]   gi|14488811, gi|... gi|178847521|pdb|3BDM|T Chain T, Yeast 20s Proteasome:glidobactin A-Complex, gi|178847507|pdb|3BDM|F... 6 6 14.6% 0.00155 31405
[View Peptides]   ACE2 Transcription factor that activates expression of early G1-specific genes, localizes to daughter cel... 7 7 14.3% 6.75E-4 86634
[View Peptides]   RXT2 Subunit of the histone deacetylase Rpd3L complex; possibly involved in cell fusion and invasive grow... 3 3 14.3% 4.92E-4 51298
[View Peptides]   gi|49258852 gi|49258852|pdb|1S1I|N Chain N, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 2 2 14.2% 8.12E-4 20418
[View Peptides]   PRE1 Beta 4 subunit of the 20S proteasome; localizes to the nucleus throughout the cell cycle 2 2 14.1% 7.5E-4 22517
[View Peptides]   HSP42 Small heat shock protein (sHSP) with chaperone activity; forms barrel-shaped oligomers that suppress... 4 6 13.9% 0.00119 42817
[View Peptides]   RM08_YEAST (P22353) Mitochondrial 60S ribosomal protein L8 (YmL8) 2 2 13.9% 6.27E-4 26814
[View Peptides]   RPN11 Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiq... 2 3 13.7% 7.28E-4 34398
[View Peptides]   SRP68 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex that functio... 5 6 13.5% 7.44E-4 69006
[View Peptides]   GLO2 Cytoplasmic glyoxalase II, catalyzes the hydrolysis of S-D-lactoylglutathione into glutathione and D... 2 6 13.5% 0.00163 31327
[View Peptides]   PMA1 Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plas... 9 10 13.4% 8.09E-4 99619
[View Peptides]   MRPS9 Mitochondrial ribosomal protein of the small subunit 2 2 13.3% 5.34E-4 31925
[View Peptides]   CPR5 Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum, catalyzes the cis-tr... 2 2 13.3% 6.6E-4 25327
[View Peptides]   NIP1 eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), involved in the assembly of ... 9 9 13.2% 8.23E-4 93204
[View Peptides]   ILV2 Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis and is ... 7 7 13.1% 7.57E-4 74937
[View Peptides]   MKT1 Protein that forms a complex with Pbp1p that may mediate posttranscriptional regulation of HO endonu... 6 6 12.9% 5.37E-4 94494
[View Peptides]   URA2 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes t... 18 22 12.8% 7.38E-4 245123
[View Peptides]   PRE8 Alpha 2 subunit of the 20S proteasome 2 2 12.8% 5.94E-4 27162
[View Peptides]   TSL1 Large subunit of trehalose 6-phosphate synthase (Tps1p)/phosphatase (Tps2p) complex, which converts ... 9 11 12.7% 7.44E-4 123018
[View Peptides]   SHS1 One of five related septins (Cdc3p, Cdc10p, Cdc11p, Cdc12p, Shs1p) that form a cortical filamentous ... 4 4 12.7% 5.39E-4 62630
[View Peptides]   FMP10 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi... 2 2 12.7% 6.09E-4 27698
[View Peptides]   MYO2 One of two type V myosin motors (along with MYO4) involved in actin-based transport of cargos; requi... 12 14 12.6% 6.61E-4 180679
[View Peptides]   PDC1_YEAST, DCP1... (P06169) Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (EC 4.1.1.-), (P06169) Pyruvate decarboxylase... 5 7 12.6% 9.25E-4 61364
[View Peptides]   MRPL1 Mitochondrial ribosomal protein of the large subunit 2 2 12.6% 5.21E-4 30996
[View Peptides]   NOP58 Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the ... 4 4 12.5% 5.81E-4 56956
[View Peptides]   ALD4 Mitochondrial aldehyde dehydrogenase, required for growth on ethanol and conversion of acetaldehyde ... 4 4 12.5% 5.73E-4 56724
[View Peptides]   CDC11 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui... 3 5 12.5% 8.95E-4 47649
[View Peptides]   CDC19 Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvat... 5 6 12.4% 8.91E-4 54545
[View Peptides]   YPR148C Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 2 3 12.4% 5.12E-4 49279
[View Peptides]   PIL1 Primary component of eisosomes, which are large immobile cell cortex structures associated with endo... 3 3 12.4% 6.57E-4 38349
[View Peptides]   NUS1 Putative prenyltransferase, required for cell viability; proposed to be involved in protein traffick... 2 2 12.3% 3.96E-4 42557
[View Peptides]   YPL014W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 3 4 12.3% 7.8E-4 42477
[View Peptides]   CDC73 Component of the Paf1p complex that binds to and modulates the activity of RNA polymerases I and II;... 2 2 12.2% 3.78E-4 44456
[View Peptides]   IKI1 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; iki1... 2 2 12.0% 4.81E-4 35220
[View Peptides]   SDH1 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxid... 3 3 11.9% 3.48E-4 70229
[View Peptides]   GCD7 Beta subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for ... 3 4 11.8% 7.8E-4 42570
[View Peptides]   RIB5 Riboflavin synthase; catalyzes the last step of the riboflavin biosynthesis pathway 2 2 11.8% 6.24E-4 26196
[View Peptides]   EF1B_YEAST (P32471) Elongation factor 1-beta (EF-1-beta) 2 2 11.7% 7.25E-4 22689
[View Peptides]   RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L) 3 3 11.7% 0.00119 21573
[View Peptides]   gi|6686356, gi|2... gi|6686356|sp|P47098.2|YJ11B_YEAST RecName: Full=Transposon Ty1-JR1 Gag-Pol polyprotein; AltName: Fu... 13 20 11.5% 8.47E-4 198615
[View Peptides]   YER138C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 13 20 11.5% 8.47E-4 198561
[View Peptides]   AIM21 Protein of unknown function involved in mitochondrial migration along actin filament; may interact w... 3 3 11.5% 3.28E-4 74763
[View Peptides]   RTT106 Histone chaperone, involved in regulation of chromatin structure in both transcribed and silenced ch... 2 2 11.4% 3.27E-4 51621
[View Peptides]   RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B) 2 3 11.4% 8.77E-4 28681
[View Peptides]   ECM10 Heat shock protein of the Hsp70 family, localized in mitochondrial nucleoids, plays a role in protei... 6 28 11.3% 0.00323 70085
[View Peptides]   PCK1 Phosphoenolpyruvate carboxykinase, key enzyme in gluconeogenesis, catalyzes early reaction in carboh... 3 3 11.3% 4.06E-4 60983
[View Peptides]   gi|1078215, gi|5... sp|P38262|SIF2_YEAST SIR4-interacting protein SIF2, gi|476059|emb|CAA55606.1| YBR0832 [Saccharomyce... 3 3 11.2% 4.17E-4 59145
[View Peptides]   RSC6 Component of the RSC chromatin remodeling complex; essential for mitotic growth; homolog of SWI/SNF ... 3 4 11.2% 6.15E-4 54165
[View Peptides]   TEF4 Translation elongation factor EF-1 gamma 3 4 11.2% 7.21E-4 46520
[View Peptides]   CAB5 Probable dephospho-CoA kinase (DPCK) that catalyzes the last step in coenzyme A biosynthesis; null m... 2 2 11.2% 6.16E-4 27340
[View Peptides]   GUT2 Mitochondrial glycerol-3-phosphate dehydrogenase; expression is repressed by both glucose and cAMP a... 4 4 11.1% 4.58E-4 72389
[View Peptides]   PEP4 Vacuolar aspartyl protease (proteinase A), required for the posttranslational precursor maturation o... 3 4 11.1% 7.34E-4 44499
[View Peptides]   YDR170W-A Retrotransposon TYA Gag gene; Gag is a nucleocapsid protein that is the structural constituent of vi... 4 5 10.9% 8.44E-4 49445
[View Peptides]   YMR046C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 4 5 10.9% 8.44E-4 49274
[View Peptides]   YHR033W Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm 3 3 10.9% 5.27E-4 46864
[View Peptides]   TAF5 Subunit (90 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation... 4 4 10.8% 3.72E-4 88968
[View Peptides]   UGP1 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc from glucose 1... 4 4 10.8% 5.95E-4 55988
[View Peptides]   AYR1 NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase found in lipid particles, ER, and mitoch... 2 2 10.8% 5.0E-4 32814
[View Peptides]   gi|171350, gi|17... gi|172726|gb|AAA35103.1| SSN6 protein [Saccharomyces cerevisiae], gi|171350|gb|AAA34545.1| CYC8 prot... 6 6 10.6% 4.61E-4 107202
[View Peptides]   gi|261567, gi|399207 gi|399207|sp|P31384.1|CCR4_YEAST RecName: Full=Glucose-repressible alcohol dehydrogenase transcripti... 5 6 10.6% 5.33E-4 94700
[View Peptides]   CCT6 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, essential protein that is re... 4 4 10.4% 5.44E-4 59924
[View Peptides]   UME1 Negative regulator of meiosis, required for repression of a subset of meiotic genes during vegetativ... 3 3 10.4% 4.84E-4 51022
[View Peptides]   PET9 Major ADP/ATP carrier of the mitochondrial inner membrane, exchanges cytosolic ADP for mitochondrial... 2 3 10.4% 7.01E-4 34426
[View Peptides]   YDR261C-D Retrotransposon TYA Gag and TYB Pol genes; in YDRCTY1-3 TYB is mutant and probably non-functional 12 19 10.4% 8.8E-4 181660
[View Peptides]   YOL103W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 11 17 10.3% 7.2E-4 198613
[View Peptides]   ARP7 Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved... 3 3 10.3% 4.67E-4 53810
[View Peptides]   EF3A_YEAST (P16521) Elongation factor 3A (EF-3A) (EF-3) (Translation elongation factor 3A) (Eukaryotic elongati... 6 6 10.2% 4.27E-4 115862
[View Peptides]   VAC14 Protein involved in regulated synthesis of PtdIns(3,5)P(2), in control of trafficking of some protei... 5 5 10.2% 4.22E-4 99773
[View Peptides]   MET17_YEAST, MT1... (P06106) MET17 protein [Includes: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) (OAH sulfhydrylase)... 3 3 10.2% 5.03E-4 48541
[View Peptides]   RPN2_YEAST (P32565) 26S proteasome regulatory subunit RPN2 7 10 10.1% 7.87E-4 104101
[View Peptides]   CCT3 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 3 3 10.1% 4.17E-4 58814
[View Peptides]   GDH1 NADP(+)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarat... 3 3 10.1% 4.91E-4 49570
[View Peptides]   SHE3 Protein that acts as an adaptor between Myo4p and the She2p-mRNA complex; part of the mRNA localizat... 2 2 10.1% 3.5E-4 47417
[View Peptides]   YJL206C Putative protein of unknown function; similar to transcriptional regulators from the Zn[2]-Cys[6] bi... 5 6 10.0% 5.88E-4 86663
[View Peptides]   PIM1 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria; required ... 6 6 9.9% 3.93E-4 127112
[View Peptides]   PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear (Poly(A)-binding protein) (PABP) (AR... 3 3 9.9% 3.87E-4 64213
[View Peptides]   YLR049C Putative protein of unknown function 2 2 9.8% 3.47E-4 49493
[View Peptides]   ARC1 Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases (Mes1p and Gus1p), delivering t... 2 2 9.8% 3.95E-4 42084
[View Peptides]   ADH2_YEAST (P00331) Alcohol dehydrogenase 2 (EC 1.1.1.1) (Alcohol dehydrogenase II) (YADH-2) 3 3 9.8% 6.42E-4 36601
[View Peptides]   CEG1 Alpha (guanylyltransferase) subunit of the mRNA capping enzyme, a heterodimer (the other subunit is ... 3 3 9.6% 4.86E-4 52764
[View Peptides]   RPT1 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 3 3 9.6% 4.77E-4 51983
[View Peptides]   ATP3 Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily ... 2 2 9.6% 4.78E-4 34351
[View Peptides]   YGR027W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 12 19 9.5% 8.04E-4 198656
[View Peptides]   YGR250C Putative RNA binding protein; localizes to stress granules induced by glucose deprivation; interacts... 5 5 9.5% 4.76E-4 89513
[View Peptides]   TFB4 Subunit of TFIIH complex, involved in transcription initiation, similar to 34 kDa subunit of human T... 2 2 9.5% 4.4E-4 37457
[View Peptides]   gi|2120067, gi|7... gi|74627262|sp|Q12088.1|YL11B_YEAST RecName: Full=Transposon Ty1-LR1 Gag-Pol polyprotein; AltName: F... 12 19 9.5% 8.04E-4 198460
[View Peptides]   gi|2131099, gi|6... gi|6686357|sp|P47100|YJZ9_YEAST Transposon Ty1 protein B, gi|2131099|emb|CAA89556.1| TY1B [Saccharom... 12 19 9.5% 8.04E-4 198592
[View Peptides]   YER160C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 12 19 9.5% 8.04E-4 198568
[View Peptides]   ARO1 Pentafunctional arom protein, catalyzes steps 2 through 6 in the biosynthesis of chorismate, which i... 12 12 9.4% 5.61E-4 174754
[View Peptides]   CAM1 Nuclear protein required for transcription of MXR1; binds the MXR1 promoter in the presence of other... 2 2 9.4% 3.58E-4 47088
[View Peptides]   YHR214C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 12 19 9.3% 7.87E-4 202816
[View Peptides]   RPA135 RNA polymerase I second largest subunit A135 5 5 9.3% 3.09E-4 135742
[View Peptides]   COG4 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tet... 5 5 9.3% 4.31E-4 98665
[View Peptides]   SWI3 Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chr... 5 6 9.2% 5.4E-4 92926
[View Peptides]   SRB4 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 3 3 9.2% 3.24E-4 78476
[View Peptides]   SEH1 Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex (Nup84p, Nup85p, Nu... 2 2 9.2% 4.26E-4 39123
[View Peptides]   SEC7 Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors involved in proliferation of t... 10 10 9.1% 3.7E-4 226884
[View Peptides]   CRN1 Coronin, cortical actin cytoskeletal component that associates with the Arp2p/Arp3p complex to regul... 5 5 9.1% 5.71E-4 72553
[View Peptides]   YNL284C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 3 3 9.1% 5.06E-4 49309
[View Peptides]   PRE2 Beta 5 subunit of the 20S proteasome, responsible for the chymotryptic activity of the proteasome 2 2 9.1% 5.18E-4 31637
[View Peptides]   SIN3 Component of the Sin3p-Rpd3p histone deacetylase complex, involved in transcriptional repression and... 10 10 9.0% 4.84E-4 174838
[View Peptides]   ENT2 Epsin-like protein required for endocytosis and actin patch assembly and functionally redundant with... 3 3 9.0% 3.64E-4 71807
[View Peptides]   MRI1 5'-methylthioribose-1-phosphate isomerase; catalyzes the isomerization of 5-methylthioribose-1-phosp... 2 2 9.0% 3.61E-4 45020
[View Peptides]   MRPL35 Mitochondrial ribosomal protein of the large subunit 2 2 9.0% 4.05E-4 42825
[View Peptides]   NOT5 Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcrip... 3 5 8.9% 6.63E-4 65855
[View Peptides]   NSR1 Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ri... 2 2 8.9% 3.59E-4 44535
[View Peptides]   SAM1 S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom ... 2 2 8.9% 3.89E-4 41818
[View Peptides]   YBR012W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 10 15 8.7% 6.35E-4 198868
[View Peptides]   GFA1_YEAST (P14742) Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (Hexosephosp... 4 4 8.7% 4.15E-4 79916
[View Peptides]   STI1 Hsp90 cochaperone, interacts with the Ssa group of the cytosolic Hsp70 chaperones; activates the ATP... 2 2 8.7% 2.52E-4 66265
[View Peptides]   RTN2 Protein of unknown function; has similarity to mammalian reticulon proteins; member of the RTNLA (re... 2 2 8.7% 3.78E-4 44359
[View Peptides]   PMA2 Plasma membrane H+-ATPase, isoform of Pma1p, involved in pumping protons out of the cell; regulator ... 6 7 8.6% 5.49E-4 102172
[View Peptides]   YGR130C Putative protein of unknown function; GFP-fusion protein localizes to the cytoplasm; possible compon... 4 5 8.6% 4.55E-4 92698
[View Peptides]   SRV2 CAP (cyclase-associated protein) subunit of adenylyl cyclase complex; N-terminus binds adenylyl cycl... 5 5 8.6% 7.06E-4 57522
[View Peptides]   DIG1 Regulatory protein of unknown function, constitutively-expressed, involved in the regulation of mati... 2 2 8.6% 3.29E-4 49356
[View Peptides]   YBL005W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 3 4 8.6% 6.75E-4 49285
[View Peptides]   YDR210C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 3 5 8.6% 8.44E-4 49187
[View Peptides]   NUP2 Nucleoporin involved in nucleocytoplasmic transport, binds to either the nucleoplasmic or cytoplasmi... 3 3 8.5% 3.1E-4 77881
[View Peptides]   XKS1 Xylulokinase, converts D-xylulose and ATP to xylulose 5-phosphate and ADP; rate limiting step in fer... 2 2 8.5% 2.48E-4 68321
[View Peptides]   NUP57 Nucleoporin, essential subunit of the nuclear pore complex (NPC), functions as the organizing center... 2 2 8.5% 2.75E-4 57499
[View Peptides]   PRM5 Pheromone-regulated protein, predicted to have 1 transmembrane segment; induced during cell integrit... 2 3 8.5% 7.01E-4 34651
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 3 3 8.4% 2.65E-4 93289
[View Peptides]   MRP51 Mitochondrial ribosomal protein of the small subunit; MRP51 exhibits genetic interactions with mutat... 2 2 8.4% 4.32E-4 39445
[View Peptides]   gi|1945315, gi|1... gi|1945316|emb|CAA97035.1| TY1B [Saccharomyces cerevisiae], gi|1945315|emb|CAA97027.1| TY1B [Sacchar... 10 16 8.3% 6.77E-4 198621
[View Peptides]   gi|1945331, gi|1... gi|1945334|emb|CAA97182.1| TY1B [Saccharomyces cerevisiae], gi|1945331|emb|CAA97178.1| TY1B [Sacchar... 10 16 8.3% 6.77E-4 198659
[View Peptides]   GLC7 Type 1 serine/threonine protein phosphatase catalytic subunit, involved in many processes (eg: glyco... 2 2 8.3% 4.76E-4 35907
[View Peptides]   SEC31 Component of the Sec13p-Sec31p complex of the COPII vesicle coat, required for vesicle formation in ... 7 7 8.2% 4.08E-4 138703
[View Peptides]   GYS1_YEAST (P23337) Glycogen [starch] synthase isoform 1 (EC 2.4.1.11) 3 3 8.2% 3.15E-4 80379
[View Peptides]   PGK_YEAST (P00560) Phosphoglycerate kinase (EC 2.7.2.3) 3 6 8.2% 0.00107 44607
[View Peptides]   YGP1 Cell wall-related secretory glycoprotein; induced by nutrient deprivation-associated growth arrest a... 2 2 8.2% 4.2E-4 37328
[View Peptides]   RSC8 Component of the RSC chromatin remodeling complex; essential for viability and mitotic growth; homol... 3 3 8.1% 4.0E-4 63168
[View Peptides]   NRD1 RNA-binding protein that interacts with the C-terminal domain of the RNA polymerase II large subunit... 3 4 8.0% 5.17E-4 63859
[View Peptides]   RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8 2 3 8.0% 6.61E-4 38181
[View Peptides]   TUB3 Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form... 2 2 7.9% 3.34E-4 49694
[View Peptides]   BUD8 Protein involved in bud-site selection; diploid mutants display a unipolar budding pattern instead o... 2 2 7.8% 2.46E-4 66289
[View Peptides]   HOL1 Putative transporter in the major facilitator superfamily (DHA1 family) of multidrug resistance tran... 2 2 7.8% 2.54E-4 65348
[View Peptides]   RPC40 RNA polymerase subunit AC40, common to RNA polymerase I and III 2 2 7.8% 4.43E-4 37687
[View Peptides]   YPS1 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor 2 2 7.7% 2.61E-4 60010
[View Peptides]   NOP56 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that ... 3 3 7.7% 4.42E-4 56864
[View Peptides]   ATG22 Vacuolar integral membrane protein required for efflux of amino acids during autophagic body breakdo... 2 2 7.6% 2.81E-4 58844
[View Peptides]   BRL1 Essential nuclear envelope integral membrane protein identified as a suppressor of a conditional mut... 2 2 7.6% 3.15E-4 53385
[View Peptides]   CMK2 Calmodulin-dependent protein kinase; may play a role in stress response, many CA++/calmodulan depend... 2 8 7.6% 0.00133 50448
[View Peptides]   gi|135054, gi|4593 gi|4593|emb|CAA27719.1| unnamed protein product [Saccharomyces cerevisiae], gi|135054|sp|P12385.1|ER... 2 2 7.6% 3.4E-4 48991
[View Peptides]   YLR149C Putative protein of unknown function; overexpression causes a cell cycle delay or arrest; null mutat... 4 4 7.5% 4.07E-4 82799
[View Peptides]   CYS4 Cystathionine beta-synthase, catalyzes synthesis of cystathionine from serine and homocysteine, the ... 3 3 7.5% 4.4E-4 56022
[View Peptides]   CBF5 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (s... 2 2 7.5% 3.08E-4 54705
[View Peptides]   YJL216C Protein of unknown function, similar to alpha-D-glucosidases; transcriptionally activated by both Pd... 2 2 7.4% 2.56E-4 67557
[View Peptides]   RPN6 Essential, non-ATPase regulatory subunit of the 26S proteasome lid required for the assembly and act... 2 2 7.4% 3.42E-4 49774
[View Peptides]   RPG1 eIF3a subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati... 5 6 7.3% 4.62E-4 110344
[View Peptides]   SYKC_YEAST (P15180) Lysyl-tRNA synthetase, cytoplasmic (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) 3 3 7.3% 3.78E-4 67827
[View Peptides]   BUD22 Protein that cosediments with pre-ribosomal particles, required for biogenesis of the small ribosoma... 2 4 7.3% 5.73E-4 60054
[View Peptides]   PHO23 Probable component of the Rpd3 histone deacetylase complex, involved in transcriptional regulation o... 2 2 7.3% 4.5E-4 37024
[View Peptides]   gi|416765, gi|287911 gi|416765|sp|P25655.2|NOT1_YEAST RecName: Full=General negative regulator of transcription subunit 1... 9 10 7.2% 3.52E-4 240332
[View Peptides]   RPN7 Essential, non-ATPase regulatory subunit of the 26S proteasome, similar to another S. cerevisiae reg... 2 2 7.2% 3.46E-4 48959
[View Peptides]   TFC1 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part... 2 2 7.1% 2.29E-4 73554
[View Peptides]   ATP25 Mitochondrial protein required for the stability of Oli1p (Atp9p) mRNA and for the Oli1p ring format... 2 3 7.0% 3.64E-4 70414
[View Peptides]   BBC1 Protein possibly involved in assembly of actin patches; interacts with an actin assembly factor Las1... 4 4 6.9% 2.57E-4 128296
[View Peptides]   BRN1 Subunit of the condensin complex; required for chromosome condensation and for clustering of tRNA ge... 3 3 6.9% 3.06E-4 83023
[View Peptides]   RPN9 Non-ATPase regulatory subunit of the 26S proteasome, has similarity to putative proteasomal subunits... 2 2 6.9% 3.78E-4 45783
[View Peptides]   SPA2 Component of the polarisome, which functions in actin cytoskeletal organization during polarized gro... 5 5 6.8% 2.53E-4 163142
[View Peptides]   YLR001C Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi... 3 6 6.8% 5.17E-4 97618
[View Peptides]   NSP1 Essential component of the nuclear pore complex, which mediates nuclear import and export, found in ... 4 5 6.8% 4.51E-4 86516
[View Peptides]   VPS5 Nexin-1 homolog required for localizing membrane proteins from a prevacuolar/late endosomal compartm... 2 3 6.8% 3.3E-4 76484
[View Peptides]   GCD2 Delta subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for... 2 2 6.8% 2.28E-4 70852
[View Peptides]   SNF12 73 kDa subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; h... 2 2 6.7% 2.62E-4 63871
[View Peptides]   PYC2 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly simi... 4 4 6.6% 2.52E-4 130167
[View Peptides]   PYC1 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly simi... 4 4 6.6% 2.52E-4 130099
[View Peptides]   SIN4 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 3 4 6.6% 3.05E-4 111297
[View Peptides]   NUP84 Subunit of the nuclear pore complex (NPC), forms a subcomplex with Nup85p, Nup120p, Nup145p-C, Sec13... 3 4 6.6% 4.09E-4 83635
[View Peptides]   SKN7 Nuclear response regulator and transcription factor, part of a branched two-component signaling syst... 2 2 6.6% 2.39E-4 69202
[View Peptides]   SSZ1 Hsp70 protein that interacts with Zuo1p (a DnaJ homolog) to form a ribosome-associated complex that ... 2 2 6.6% 2.6E-4 62186
[View Peptides]   FEN2 Plasma membrane H+-pantothenate symporter; confers sensitivity to the antifungal agent fenpropimorph 2 2 6.6% 2.9E-4 58257
[View Peptides]   TCB3 Lipid-binding protein, localized to the bud via specific mRNA transport; non-tagged protein detected... 5 5 6.5% 2.4E-4 171075
[View Peptides]   GDH2 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate; exp... 5 5 6.5% 3.4E-4 124332
[View Peptides]   IMH1 Protein involved in vesicular transport, mediates transport between an endosomal compartment and the... 4 4 6.5% 3.26E-4 105225
[View Peptides]   ALK2 Protein kinase; accumulation and phosphorylation are periodic during the cell cycle; phosphorylated ... 2 2 6.5% 2.2E-4 76372
[View Peptides]   PIG2 Putative type-1 protein phosphatase targeting subunit that tethers Glc7p type-1 protein phosphatase ... 2 2 6.5% 2.76E-4 61938
[View Peptides]   PLP1 Protein that interacts with CCT (chaperonin containing TCP-1) complex and has a role in actin and tu... 2 2 6.5% 6.46E-4 26623
[View Peptides]   ARP8 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en... 3 3 6.4% 2.53E-4 100209
[View Peptides]   YHR020W Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 3 3 6.4% 3.24E-4 77386
[View Peptides]   PUF4 Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that ... 3 3 6.3% 2.51E-4 97798
[View Peptides]   HXT9 Putative hexose transporter that is nearly identical to Hxt11p, has similarity to major facilitator ... 2 2 6.3% 2.62E-4 62858
[View Peptides]   NUP100 Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore; contains a re... 3 3 6.2% 2.32E-4 99988
[View Peptides]   PHO85 Cyclin-dependent kinase, with ten cyclin partners; involved in regulating the cellular response to n... 4 6 6.2% 0.00146 34906
[View Peptides]   FAA4 Long chain fatty acyl-CoA synthetase, activates imported fatty acids with a preference for C12:0-C16... 3 3 6.1% 3.21E-4 77267
[View Peptides]   SRM1 Nucleotide exchange factor for Gsp1p, localizes to the nucleus, required for nucleocytoplasmic traff... 2 2 6.0% 3.08E-4 53014
[View Peptides]   GCD6 Catalytic epsilon subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchang... 2 2 5.9% 2.09E-4 81161
[View Peptides]   RAD24 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints; ... 2 2 5.9% 2.25E-4 75727
[View Peptides]   GCN1 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn20p; proposed to stimulate ... 10 12 5.8% 3.34E-4 296697
[View Peptides]   KAP95 Karyopherin beta, forms a complex with Srp1p/Kap60p; interacts with nucleoporins to mediate nuclear ... 2 3 5.8% 2.59E-4 94776
[View Peptides]   GCR1 Transcriptional activator of genes involved in glycolysis; DNA-binding protein that interacts and fu... 3 3 5.8% 2.64E-4 94318
[View Peptides]   YMR031C Protein of unknown function with similarity to Ykl050cp and Uso1p; the authentic, non-tagged protein... 3 3 5.8% 2.64E-4 93345
[View Peptides]   VPS35 Endosomal subunit of membrane-associated retromer complex required for retrograde transport; recepto... 2 2 5.6% 1.57E-4 109142
[View Peptides]   RSC2 Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-s... 4 4 5.6% 3.34E-4 102300
[View Peptides]   POB3 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), which associates with chromatin via intera... 2 2 5.6% 2.69E-4 62994
[View Peptides]   FAR8 Protein involved in recovery from cell cycle arrest in response to pheromone, in a Far1p-independent... 2 2 5.5% 2.84E-4 59301
[View Peptides]   BCH1 Member of the ChAPs family (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms th... 3 3 5.4% 3.08E-4 82049
[View Peptides]   SRB8 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 3 3 5.3% 1.56E-4 166860
[View Peptides]   HSL7 Protein arginine N-methyltransferase that exhibits septin and Hsl1p-dependent bud neck localization ... 2 2 5.3% 1.8E-4 95153
[View Peptides]   UTP8 Nucleolar protein required for export of tRNAs from the nucleus; also copurifies with the small subu... 2 2 5.3% 2.08E-4 80191
[View Peptides]   PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from ... 2 2 5.3% 4.12E-4 39566
[View Peptides]   RNQ1 [PIN(+)] prion, an infectious protein conformation that is generally an ordered protein aggregate 2 2 5.2% 3.67E-4 42580
[View Peptides]   IKI3 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; main... 4 4 5.1% 2.2E-4 152990
[View Peptides]   RPB2 RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subun... 5 5 5.1% 3.03E-4 138751
[View Peptides]   PAN2 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tai... 2 2 5.1% 1.33E-4 127039
[View Peptides]   FAR1 Cyclin-dependent kinase inhibitor that mediates cell cycle arrest in response to pheromone; also for... 2 2 5.1% 1.79E-4 94572
[View Peptides]   PRP43 RNA helicase in the DEAH-box family, functions in both RNA polymerase I and polymerase II transcript... 2 2 5.0% 1.94E-4 87562
[View Peptides]   ARO10 Phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde, whi... 2 2 5.0% 2.34E-4 71384
[View Peptides]   YTA7 Protein that localizes to chromatin and has a role in regulation of histone gene expression; has a b... 5 5 4.9% 2.69E-4 157406
[View Peptides]   POM152 Nuclear pore membrane glycoprotein; may be involved in duplication of nuclear pores and nuclear pore... 3 3 4.9% 1.67E-4 151652
[View Peptides]   ALR1 Plasma membrane Mg(2+) transporter, expression and turnover are regulated by Mg(2+) concentration; o... 2 2 4.9% 1.73E-4 95869
[View Peptides]   YPL257W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 4 6 4.8% 2.54E-4 198575
[View Peptides]   YBL113C Helicase-like protein encoded within the telomeric Y' element 2 2 4.8% 1.88E-4 86976
[View Peptides]   CIR2 Mitochondrial protein with similarity to flavoprotein-type oxidoreductases; found in a large supramo... 2 2 4.8% 2.35E-4 69634
[View Peptides]   RAP1 DNA-binding protein involved in either activation or repression of transcription, depending on bindi... 2 2 4.7% 1.8E-4 92413
[View Peptides]   YIL108W Putative metalloprotease 2 2 4.7% 2.13E-4 77414
[View Peptides]   RPN5 Essential, non-ATPase regulatory subunit of the 26S proteasome lid, similar to mammalian p55 subunit... 2 9 4.7% 0.0015 51769
[View Peptides]   NUP170 Subunit of the nuclear pore complex (NPC), required for NPC localization of specific nucleoporins; i... 4 5 4.6% 2.47E-4 169474
[View Peptides]   SMC3 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells;... 3 3 4.6% 1.81E-4 141336
[View Peptides]   CIT1 Citrate synthase, catalyzes the condensation of acetyl coenzyme A and oxaloacetate to form citrate; ... 2 2 4.6% 3.1E-4 53360
[View Peptides]   INO80 ATPase, subunit of a complex containing actin and several actin-related proteins that has chromatin ... 5 6 4.5% 2.99E-4 171454
[View Peptides]   TRS120 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates... 4 4 4.5% 2.31E-4 147662
[View Peptides]   MRD1 Essential conserved protein that is part of the 90S preribosome; required for production of 18S rRNA... 2 4 4.5% 3.35E-4 101120
[View Peptides]   VRP1 Proline-rich actin-associated protein involved in cytoskeletal organization and cytokinesis; related... 2 2 4.5% 1.82E-4 82594
[View Peptides]   DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, required for translation initiation of all ye... 2 2 4.5% 2.46E-4 65553
[View Peptides]   GAL2 Galactose permease, required for utilization of galactose; also able to transport glucose 2 2 4.5% 2.59E-4 63626
[View Peptides]   RPO31 RNA polymerase III largest subunit C160, part of core enzyme; similar to bacterial beta-prime subuni... 3 3 4.4% 1.53E-4 162301
[View Peptides]   NUP133 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), localizes to both sides of the N... 5 5 4.4% 3.21E-4 133320
[View Peptides]   RSC3 Component of the RSC chromatin remodeling complex; essential gene required for maintenance of proper... 3 3 4.4% 2.52E-4 101720
[View Peptides]   RAD16 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) during nucleot... 2 2 4.4% 1.88E-4 91430
[View Peptides]   RNA15 Cleavage and polyadenylation factor I (CF I) component involved in cleavage and polyadenylation of m... 2 2 4.4% 5.02E-4 32791
[View Peptides]   TOR1 PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in... 6 7 4.3% 2.11E-4 281138
[View Peptides]   YNL284C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 5 4.3% 2.12E-4 198997
[View Peptides]   TCB1 Lipid-binding protein containing three calcium and lipid binding domains; non-tagged protein localiz... 3 3 4.3% 1.88E-4 133576
[View Peptides]   RGR1 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 3 3 4.3% 2.06E-4 123358
[View Peptides]   TAF1 TFIID subunit (145 kDa), involved in RNA polymerase II transcription initiation; possesses in vitro ... 2 2 4.3% 1.39E-4 120696
[View Peptides]   MSC1 Protein of unknown function; mutant is defective in directing meiotic recombination events to homolo... 2 2 4.3% 2.9E-4 59589
[View Peptides]   SEC8 Essential 121kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p,... 2 2 4.2% 1.4E-4 122224
[View Peptides]   NUP120 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), required for even distribution o... 3 3 4.2% 2.15E-4 120448
[View Peptides]   SEC24 Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, required for cargo selection d... 2 2 4.2% 1.6E-4 103635
[View Peptides]   NUP85 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), required for assembly of the sub... 2 2 4.2% 2.0E-4 84898
[View Peptides]   NRP1 Putative RNA binding protein of unknown function; localizes to stress granules induced by glucose de... 2 2 4.2% 2.07E-4 79299
[View Peptides]   PUF3 Protein of the mitochondrial outer surface, links the Arp2/3 complex with the mitochore during anter... 2 2 4.1% 1.69E-4 98068
[View Peptides]   SVL3 Protein of unknown function, mutant phenotype suggests a potential role in vacuolar function; green ... 2 2 4.1% 1.8E-4 92144
[View Peptides]   GUS1 Glutamyl-tRNA synthetase (GluRS), forms a complex with methionyl-tRNA synthetase (Mes1p) and Arc1p; ... 2 2 4.1% 2.05E-4 82663
[View Peptides]   YFR016C Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 3 3 4.0% 1.81E-4 137698
[View Peptides]   YDL073W Putative protein of unknown function; YDL073W is not an essential gene 2 2 4.0% 1.51E-4 113891
[View Peptides]   SPC98 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the... 2 2 4.0% 1.76E-4 98227
[View Peptides]   VPS30 Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II; Complex I is essential in auto... 2 4 3.9% 5.33E-4 63261
[View Peptides]   PSK1 One of two (see also PSK2) PAS domain containing S/T protein kinases; coordinately regulates protein... 2 2 3.8% 1.1E-4 152330
[View Peptides]   UBP15 Ubiquitin-specific protease that may play a role in ubiquitin precursor processing 2 2 3.8% 1.21E-4 143563
[View Peptides]   VPS41 Vacuolar membrane protein that is a subunit of the homotypic vacuole fusion and vacuole protein sort... 2 3 3.8% 2.25E-4 113412
[View Peptides]   CRT10 Protein involved in transcriptional regulation of RNR2 and RNR3; expression of the gene is induced b... 2 2 3.8% 1.55E-4 109715
[View Peptides]   SMY1 Protein that interacts with Myo2p, proposed to be involved in exocytosis; N-terminal domain is relat... 2 5 3.8% 5.66E-4 73799
[View Peptides]   STH1 ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic g... 4 4 3.7% 2.19E-4 156742
[View Peptides]   gi|1732237, gi|2... sp|P89105|CTR9_YEAST CTR9 protein, gi|1732237|gb|AAB38704.1| CTR9 [Saccharomyces cerevisiae] 3 3 3.7% 2.07E-4 124751
[View Peptides]   RSC1 Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-s... 3 3 3.7% 2.4E-4 106669
[View Peptides]   COG3 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tet... 2 2 3.7% 1.85E-4 92544
[View Peptides]   MLP1 Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the... 4 4 3.6% 1.58E-4 218454
[View Peptides]   PAN1 Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, associates with actin patches on th... 2 4 3.6% 2.01E-4 160266
[View Peptides]   SMC1 Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an... 3 3 3.6% 1.82E-4 141280
[View Peptides]   UTP4 Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in pr... 2 2 3.6% 1.91E-4 87801
[View Peptides]   NOP7 Component of several different pre-ribosomal particles; forms a complex with Ytm1p and Erb1p that is... 2 2 3.6% 2.46E-4 69877
[View Peptides]   MAL13 MAL-activator protein, part of complex locus MAL1; nonfunctional in genomic reference strain S288C 2 2 3.6% 3.14E-4 54325
[View Peptides]   BEM3 Rho GTPase activating protein (RhoGAP) involved in control of the cytoskeleton organization; targets... 3 3 3.5% 1.98E-4 124913
[View Peptides]   AMS1 Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation; delivered to the vac... 3 3 3.5% 2.06E-4 124499
[View Peptides]   YME2 Integral inner mitochondrial membrane protein with a role in maintaining mitochondrial nucleoid stru... 2 2 3.5% 1.75E-4 96689
[View Peptides]   DOP1 Golgi-localized, leucine-zipper domain containing protein; involved in endosome to Golgi transport, ... 4 4 3.4% 1.75E-4 194686
[View Peptides]   SLK19 Kinetochore-associated protein required for normal segregation of chromosomes in meiosis and mitosis... 2 2 3.4% 1.81E-4 95380
[View Peptides]   ACS2 Acetyl-coA synthetase isoform which, along with Acs1p, is the nuclear source of acetyl-coA for histo... 2 2 3.4% 2.18E-4 75492
[View Peptides]   MTC5 Protein of unknown function; mtc5 is synthetically sick with cdc13-1 2 2 3.3% 1.29E-4 130946
[View Peptides]   NAM9 Mitochondrial ribosomal component of the small subunit 2 2 3.3% 3.06E-4 56356
[View Peptides]   NUP159 Nucleoporin, subunit of the nuclear pore complex that is found exclusively on the cytoplasmic side, ... 3 3 3.2% 1.53E-4 158907
[View Peptides]   PEP5 Component of CORVET tethering complex; peripheral vacuolar membrane protein required for protein tra... 2 2 3.2% 1.44E-4 117477
[View Peptides]   UBP3 Ubiquitin-specific protease that interacts with Bre5p to co-regulate anterograde and retrograde tran... 2 2 3.2% 1.63E-4 101917
[View Peptides]   PRP5 RNA helicase in the DEAD-box family, necessary for prespliceosome formation, bridges U1 and U2 snRNP... 2 2 3.2% 1.75E-4 96359
[View Peptides]   gi|399005, gi|3324 gi|399005|sp|Q01574.1|ACS1_YEAST RecName: Full=Acetyl-coenzyme A synthetase 1; AltName: Full=Acetate... 2 2 3.2% 2.08E-4 79169
[View Peptides]   GIP3 Glc7-interacting protein whose overexpression relocalizes Glc7p from the nucleus and prevents chromo... 2 2 3.1% 1.16E-4 140891
[View Peptides]   VIP1 Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; generation of IP7 by Vi... 2 2 3.1% 1.3E-4 129755
[View Peptides]   KIN2 Serine/threonine protein kinase involved in regulation of exocytosis; localizes to the cytoplasmic f... 2 2 3.1% 1.3E-4 128338
[View Peptides]   SEC23 GTPase-activating protein, stimulates the GTPase activity of Sar1p; component of the Sec23p-Sec24p h... 2 2 3.1% 1.93E-4 85385
[View Peptides]   YDR341C Arginyl-tRNA synthetase, proposed to be cytoplasmic but the authentic, non-tagged protein is detecte... 2 2 3.1% 2.45E-4 69525
[View Peptides]   RPA190 RNA polymerase I largest subunit A190 3 3 3.0% 1.34E-4 186431
[View Peptides]   VID30 Protein involved in proteasome-dependent catabolite degradation of fructose-1,6-bisphosphatase (FBPa... 2 2 3.0% 1.55E-4 108179
[View Peptides]   IQG1 Essential protein required for determination of budding pattern, promotes localization of axial mark... 2 2 2.9% 9.94E-5 172830
[View Peptides]   NUM1 Protein required for nuclear migration, localizes to the mother cell cortex and the bud tip; may med... 6 29 2.8% 7.84E-4 313032
[View Peptides]   RPM2 Protein subunit of mitochondrial RNase P, has roles in nuclear transcription, cytoplasmic and mitoch... 2 2 2.8% 1.24E-4 139348
[View Peptides]   IOC2 Member of a complex (Isw1b) with Isw1p and Ioc4p that exhibits nucleosome-stimulated ATPase activity... 2 2 2.8% 1.83E-4 93446
[View Peptides]   KRE29 Essential subunit of the Mms21-Smc5-Smc6 complex, required for growth and DNA repair; heterozygous m... 2 11 2.8% 0.00176 53772
[View Peptides]   MDN1 Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex... 6 6 2.7% 9.08E-5 559316
[View Peptides]   gi|731756, gi|45... gi|731756|sp|P38873|YHY6_YEAST WD repeat protein YHR186C, pir||S46686 hypothetical protein YHR186c -... 3 3 2.7% 1.45E-4 175829
[View Peptides]   CCH1 Voltage-gated high-affinity calcium channel involved in calcium influx in response to some environme... 4 4 2.6% 1.46E-4 234597
[View Peptides]   gi|1326009 gi|1326009|emb|CAA87673.1| TYB protein [Saccharomyces cerevisiae] 2 2 2.6% 1.12E-4 151008
[View Peptides]   RET1 Second-largest subunit of RNA polymerase III, which is responsible for the transcription of tRNA and... 2 2 2.6% 1.29E-4 129456
[View Peptides]   GCN20 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn1p; proposed to stimulate G... 2 2 2.5% 1.98E-4 85027
[View Peptides]   RRP5 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both ... 3 3 2.4% 1.29E-4 193133
[View Peptides]   MHP1 Microtubule-associated protein involved in assembly and stabilization of microtubules; overproductio... 2 3 2.4% 1.59E-4 155207
[View Peptides]   LAA1 AP-1 accessory protein; colocalizes with clathrin to the late-Golgi apparatus; involved in TGN-endos... 2 2 2.3% 7.38E-5 229898
[View Peptides]   RPO21 RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapep... 2 3 2.3% 1.29E-4 191610
[View Peptides]   SSN2 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 2 2 2.3% 1.05E-4 160000
[View Peptides]   MNN4 Putative positive regulator of mannosylphosphate transferase (Mnn6p), involved in mannosylphosphoryl... 2 2 2.3% 1.26E-4 139380
[View Peptides]   YBL005W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.2% 8.47E-5 198968
[View Peptides]   NUP188 Subunit of the nuclear pore complex (NPC), involved in the structural organization of the complex an... 2 2 2.1% 8.98E-5 188576
[View Peptides]   RAD50 Subunit of MRX complex, with Mre11p and Xrs2p, involved in processing double-strand DNA breaks in ve... 2 2 2.1% 1.13E-4 152568
[View Peptides]   gi|1903280 gi|1903280|emb|CAA98620.1| USO1 [Saccharomyces cerevisiae] 2 2 2.1% 1.17E-4 147463
[View Peptides]   MYO1 Type II myosin heavy chain, required for wild-type cytokinesis and cell separation; localizes to the... 3 6 2.0% 2.31E-4 223634
[View Peptides]   BNI1 Formin, nucleates the formation of linear actin filaments, involved in cell processes such as buddin... 2 2 2.0% 7.61E-5 219701
[View Peptides]   YBT1 Transporter of the ATP-binding cassette (ABC) family involved in bile acid transport; similar to mam... 2 4 2.0% 1.79E-4 189161
[View Peptides]   ASH1 Zinc-finger inhibitor of HO transcription; mRNA is localized and translated in the distal tip of ana... 2 2 2.0% 2.53E-4 65685
[View Peptides]   UTP10 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ... 2 2 1.9% 8.4E-5 200080
[View Peptides]   CMR2 Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-induc... 2 2 1.9% 9.02E-5 186906
[View Peptides]   THO2 Subunit of the THO complex, which is required for efficient transcription elongation and involved in... 2 2 1.8% 9.3E-5 183930
[View Peptides]   MYO4 One of two type V myosin motors (along with MYO2) involved in actin-based transport of cargos; requi... 2 2 1.8% 1.01E-4 169343
[View Peptides]   ECM5 Non-essential protein of unknown function, contains ATP/GTP-binding site motif A; null mutant exhibi... 2 10 1.7% 5.26E-4 162700
[View Peptides]   TRA1 Subunit of SAGA and NuA4 histone acetyltransferase complexes; interacts with acidic activators (e.g.... 4 7 1.6% 1.39E-4 433182
[View Peptides]   CYR1 Adenylate cyclase, required for cAMP production and cAMP-dependent protein kinase signaling; the cAM... 2 2 1.6% 7.33E-5 227832
[View Peptides]   YRF1-3, YRF1-7 Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking ... 2 2 1.6% 7.99E-5 211114
[View Peptides]   YRF1-6 Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking ... 2 2 1.6% 7.99E-5 211098
[View Peptides]   NUP145 Essential nucleoporin, catalyzes its own cleavage in vivo to generate a C-terminal fragment that ass... 2 2 1.6% 1.13E-4 145661
[View Peptides]   SCP160 Essential RNA-binding G protein effector of mating response pathway, mainly associated with nuclear ... 2 2 1.6% 1.22E-4 134809
[View Peptides]   YDR261W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 8.39E-5 201961
[View Peptides]   YOR192C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 8.39E-5 201983
[View Peptides]   YCL019W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 8.39E-5 202095
[View Peptides]   MET5 Sulfite reductase beta subunit, involved in amino acid biosynthesis, transcription repressed by meth... 2 2 1.4% 1.03E-4 161218
[View Peptides]   MON2 Peripheral membrane protein with a role in endocytosis and vacuole integrity, interacts with Arl1p a... 2 2 1.3% 9.08E-5 186835
[View Peptides]   SYFB_YEAST (P15624) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chai... 2 6 1.3% 7.5E-4 67234
[View Peptides]   UTP20 Component of the small-subunit (SSU) processome, which is involved in the biogenesis of the 18S rRNA 2 2 0.9% 5.96E-5 287489
[View Peptides]   DYN1 Cytoplasmic heavy chain dynein, microtubule motor protein, required for anaphase spindle elongation;... 2 4 0.7% 7.26E-5 471351

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle