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Protein Overview: PRP5

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data PRP5 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..218] MSA 8.274997 View MSA. No confident structure predictions are available.
2 View Details [219..278] PSI-BLAST 461.0 Initiation factor 4a
3 View Details [279..473]
[671..746]
PSI-BLAST 13.30103 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
4 View Details [474..670] PSI-BLAST 13.30103 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
5 View Details [747..849] ORFEUS 8.62 RNA splicing factor 1

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5
Term Confidence Notes
  • RNA binding
  • 6.35205331138538 bayes_pls_golite062009
  • 4.77327442333813 bayes_pls_golite062009
  • mRNA binding
  • 4.67566555881601 bayes_pls_golite062009
  • nucleic acid binding
  • 4.53130750638836 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 3.73042056823822 bayes_pls_golite062009
  • translation regulator activity
  • 3.73023228922019 bayes_pls_golite062009
  • binding
  • 3.31439627344982 bayes_pls_golite062009
  • transcription regulator activity
  • 2.27014249542806 bayes_pls_golite062009
  • DNA binding
  • 2.0152088603757 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.75736205236351 bayes_pls_golite062009
  • transcription repressor activity
  • 1.72867277839034 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.40423326576059 bayes_pls_golite062009
  • transcription factor activity
  • 1.30878011063724 bayes_pls_golite062009
  • single-stranded DNA binding
  • 1.27324890490526 bayes_pls_golite062009
  • protein binding
  • 1.09698608157472 bayes_pls_golite062009
  • ribonuclease activity
  • 0.925909354724523 bayes_pls_golite062009
  • single-stranded RNA binding
  • 0.795008427109843 bayes_pls_golite062009
  • hydrolase activity
  • 0.715182212485288 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.370287528838428 bayes_pls_golite062009
  • transcription activator activity
  • 0.281896115904289 bayes_pls_golite062009
  • transcription factor binding
  • 0.207514957974522 bayes_pls_golite062009
  • exoribonuclease activity
  • 0.150228013820667 bayes_pls_golite062009
  • catalytic activity
  • 0.1435046019283 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 0.110425673333101 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.0108102459345405 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle