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Protein Overview: CWC22

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) BRR2 BUD31 CDC40 CEF1 CLF1 CWC2 CWC22 CWC23 HSH155 PRP19 PRP43 PRP45 PRP46 PRP8 RSE1 SNT309 SNU114 SPP382 SYF1
View Details Hazbun TR, et al. (2003) BRR2 CDC40 CEF1 CLF1 CWC2 CWC22 CWC23 ECM2 ISY1 LEA1 NTR2 PRP19 PRP43 PRP45 PRP46 PRP8 SMB1 SMD1 SMD3 SNT309 SNU114 SPP382 SYF1 SYF2 YJU2
View Details (MIPS) Mewes HW, et al. (2004) AAR2 BRR1 BRR2 CBC2 CDC40 CWC15 CWC2 CWC22 CWC23 DHR2 LSM4 MAK5 MUD2 PRP16 PRP18 PRP2 PRP22 PRP24 PRP28 PRP31 PRP38 PRP39 PRP4 PRP40 PRP43 PRP5 PRP6 PRP8 SLU7 SMD1 SMD3 SME1 SNP1 SPP2 SPP381 STO1 YHC1
View Details Krogan NJ, et al. (2006) CWC22 MSS18 PRP19 PRP46 YLR132C
View Details Gavin AC, et al. (2006) CDC40 CEF1 CLF1 CWC2 CWC22 ECM2 PRP19 PRP45 PRP46 SYF1
View Details Gavin AC, et al. (2002) AAR2 BRR1 BUD31 CDC33 CDC40 CEF1 CLF1 CSN12 CUS1 CWC2 CWC22 CWC23 DHH1 DIB1 ECM2 GCN2 HSH155 HTA1 IMG1 ISY1 LEA1 LIN1 LSM1 LSM2 LSM4 LSM5 LSM6 LSM7 LUC7 MRP7 MRPL28 MRPL3 MRPL35 MRPL38 MRPL4 MRPL8 MRPS5 MSL1 MUD1 PAT1 PRP11 PRP18 PRP19 PRP2 PRP21 PRP22 PRP24 PRP28 PRP3 PRP31 PRP38 PRP39 PRP4 PRP40 PRP42 PRP43 PRP45 PRP46 PRP6 PRP8 PRP9 RSE1 RVB2 SLU7 SMB1 SMD1 SMD2 SMD3 SME1 SMX2 SMX3 SNP1 SNT309 SNU114 SNU23 SNU56 SNU66 SNU71 SPP381 SPP382 SRB2 STO1 SYF1 TOS4 UTP21 YML6
View Details Qiu et al. (2008) AAR2 BRR1 BRR2 BUD31 CBC2 CDC40 CEF1 CLF1 CUS1 CWC15 CWC2 CWC21 CWC22 CWC23 CWC25 DHR2 DIB1 ECM2 HSH155 HSH49 ISY1 LEA1 LSM2 LSM3 LSM4 LSM7 LUC7 MAK5 MSL1 MUD1 MUD2 NAM8 NTC20 PRP11 PRP16 PRP18 PRP19 PRP2 PRP21 PRP22 PRP24 PRP28 PRP3 PRP31 PRP38 PRP39 PRP4 PRP40 PRP42 PRP43 PRP45 PRP46 PRP5 PRP6 PRP8 PRP9 RSE1 SLU7 SMB1 SMD1 SMD2 SMD3 SME1 SMX2 SMX3 SNP1 SNT309 SNU114 SNU23 SNU56 SNU66 SNU71 SPP2 SPP381 SPP382 STO1 SUB2 SYF1 SYF2 YHC1

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CWC2 No Comments Hazbun TR, et al. (2003)
View Run CWC25 No Comments Hazbun TR, et al. (2003)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #02 Alpha Factor Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data CWC22 and SPC42 Unpublished Data
View Data CWC22 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..226] PSI-BLAST 45.0 Eukaryotic initiation factor eIF4G
2 View Details [227..300] deduced N/A No confident structure predictions are available.
3 View Details [301..514] ORFEUS 7.46 CBP80, 80KDa nuclear cap-binding protein
4 View Details [515..577] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 4.20683443264388 bayes_pls_golite062009
  • mRNA binding
  • 2.49094746544717 bayes_pls_golite062009
  • binding
  • 2.47395644967726 bayes_pls_golite062009
  • nucleic acid binding
  • 1.64539435934931 bayes_pls_golite062009
  • structural molecule activity
  • 1.39201458088376 bayes_pls_golite062009
  • transcription regulator activity
  • 1.06250847754412 bayes_pls_golite062009
  • protein binding
  • 1.04044934052933 bayes_pls_golite062009
  • DNA binding
  • 0.946847037737779 bayes_pls_golite062009
  • RNA cap binding
  • 0.66277586901495 bayes_pls_golite062009
  • transcription factor activity
  • 0.362911773502049 bayes_pls_golite062009
    2
    Term Confidence Notes
  • RNA binding
  • 4.05046860305563 bayes_pls_golite062009
  • binding
  • 2.36800795249393 bayes_pls_golite062009
  • mRNA binding
  • 2.35042158577052 bayes_pls_golite062009
  • nucleic acid binding
  • 1.59410102249793 bayes_pls_golite062009
  • structural molecule activity
  • 1.3916221897201 bayes_pls_golite062009
  • transcription regulator activity
  • 1.08645493064764 bayes_pls_golite062009
  • DNA binding
  • 0.956143892328242 bayes_pls_golite062009
  • protein binding
  • 0.914877292844892 bayes_pls_golite062009
  • transcription factor activity
  • 0.371244009721798 bayes_pls_golite062009
  • RNA cap binding
  • 0.357520253345298 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle