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Protein Overview: PRP2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data PRP2 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..165] MSA 2.520994 View MSA. No confident structure predictions are available.
2 View Details [166..600] PSI-BLAST 68.09691 Initiation factor 4a
3 View Details [601..697] MSA 1.52099 View MSA. Confident ab initio structure predictions are available.
4 View Details [698..876] MSA 3.169976 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • 4.704140727858 bayes_pls_golite062009
  • binding
  • 2.44689197844883 bayes_pls_golite062009
  • RNA binding
  • 2.29590582680214 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.57653963868443 bayes_pls_golite062009
  • RNA helicase activity
  • 1.42791449104435 bayes_pls_golite062009
  • nucleic acid binding
  • 1.41477043612798 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 1.39335733374328 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 1.36724390116598 bayes_pls_golite062009
  • DNA binding
  • 1.11699929651302 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • transcription regulator activity
  • 0.989226939888218 bayes_pls_golite062009
  • mRNA binding
  • 0.76699944561918 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.652333406433794 bayes_pls_golite062009
  • helicase activity
  • 0.6191010101321 bayes_pls_golite062009
  • motor activity
  • 0.61636596887462 bayes_pls_golite062009
  • structural molecule activity
  • 0.596382945962261 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.461763181659193 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.458831409927227 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.455976987338331 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.422944846459286 bayes_pls_golite062009
  • snRNA binding
  • 0.418985924846052 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 0.29664013896754 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 0.29664013896754 bayes_pls_golite062009
  • translation release factor activity
  • 0.178286731022211 bayes_pls_golite062009
  • translation termination factor activity
  • 0.151456842619444 bayes_pls_golite062009
  • nucleotide binding
  • 0.114848452385726 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.0915913646217636 bayes_pls_golite062009
  • protein binding
  • 0.071010918255742 bayes_pls_golite062009
  • transcription factor activity
  • 0.0434163635422169 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.0272673919333979 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle