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Protein Overview: PRP22

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data PRP22 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..122] MSA 3.158997 View MSA. No confident structure predictions are available.
2 View Details [123..282] PSI-BLAST 98.144602 S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase
3 View Details [283..432] MSA 4.179995 View MSA. No confident structure predictions are available.
4 View Details [433..661] PSI-BLAST 9.154902 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
5 View Details [662..833] PSI-BLAST 9.154902 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
6 View Details [834..1145] MSA 12.325996 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • 4.75811129307632 bayes_pls_golite062009
  • transcription termination factor activity
  • 4.27506184839126 bayes_pls_golite062009
  • RNA binding
  • 4.05373509885278 bayes_pls_golite062009
  • structural constituent of ribosome
  • 3.73145378633995 bayes_pls_golite062009
  • transcription regulator activity
  • 3.24341202600661 bayes_pls_golite062009
  • structural molecule activity
  • 3.16728233432927 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.81524862921454 bayes_pls_golite062009
  • binding
  • 1.7774714353448 bayes_pls_golite062009
  • mRNA binding
  • 1.6485756688073 bayes_pls_golite062009
  • single-stranded DNA binding
  • 1.62996999055328 bayes_pls_golite062009
  • nucleic acid binding
  • 1.45130233071198 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 1.35850109411274 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 1.35845277283398 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 1.35845277283398 bayes_pls_golite062009
  • ribonuclease activity
  • 1.19236946227657 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 1.15212468568198 bayes_pls_golite062009
  • exoribonuclease activity
  • 1.10445667068538 bayes_pls_golite062009
  • DNA binding
  • 1.01454217691792 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 0.83268201349295 bayes_pls_golite062009
  • second spliceosomal transesterification activity
  • 0.448378021030889 bayes_pls_golite062009
  • protein binding
  • 0.423986689445573 bayes_pls_golite062009
  • ligase activity
  • 0.346041081217685 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.32084431704638 bayes_pls_golite062009
  • transcription factor activity
  • 0.298729064067577 bayes_pls_golite062009
  • translation regulator activity
  • 0.22908707234671 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.179682348023561 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
  • 0.151650064901878 bayes_pls_golite062009
  • translation initiation factor activity
  • 0.11625379846973 bayes_pls_golite062009
  • catalytic activity
  • 0.10089766806364 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 0.0740938021136293 bayes_pls_golite062009
  • RNA polymerase activity
  • 0.0740938021136293 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • 4.704140727858 bayes_pls_golite062009
  • binding
  • 2.44689197844883 bayes_pls_golite062009
  • RNA binding
  • 2.29590582680214 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.57653963868443 bayes_pls_golite062009
  • RNA helicase activity
  • 1.42791449104435 bayes_pls_golite062009
  • nucleic acid binding
  • 1.41477043612798 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 1.39335733374328 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 1.36724390116598 bayes_pls_golite062009
  • DNA binding
  • 1.11699929651302 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • transcription regulator activity
  • 0.989226939888218 bayes_pls_golite062009
  • mRNA binding
  • 0.76699944561918 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.652333406433794 bayes_pls_golite062009
  • helicase activity
  • 0.6191010101321 bayes_pls_golite062009
  • motor activity
  • 0.61636596887462 bayes_pls_golite062009
  • structural molecule activity
  • 0.596382945962261 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.461763181659193 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.458831409927227 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.455976987338331 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.422944846459286 bayes_pls_golite062009
  • snRNA binding
  • 0.418985924846052 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 0.29664013896754 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 0.29664013896754 bayes_pls_golite062009
  • translation release factor activity
  • 0.178286731022211 bayes_pls_golite062009
  • translation termination factor activity
  • 0.151456842619444 bayes_pls_golite062009
  • nucleotide binding
  • 0.114848452385726 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.0915913646217636 bayes_pls_golite062009
  • protein binding
  • 0.071010918255742 bayes_pls_golite062009
  • transcription factor activity
  • 0.0434163635422169 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.0272673919333979 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle