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Protein Overview: SYF1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CWC2 No Comments Hazbun TR, et al. (2003)
View Run SPP382 No Comments Hazbun TR, et al. (2003)
View Run SPP382 No Comments Hazbun TR, et al. (2003)
View Run CWC25 No Comments Hazbun TR, et al. (2003)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SYF1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..161] ORFEUS 14.67 Protein farnesyltransferase alpha-subunit
2 View Details [162..254] ORFEUS 14.67 Protein farnesyltransferase alpha-subunit
3 View Details [255..372] ORFEUS 14.67 Protein farnesyltransferase alpha-subunit
4 View Details [373..533] PSI-BLAST 16.221849 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
5 View Details [534..599] PSI-BLAST 16.221849 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
6 View Details [600..657] PSI-BLAST 16.221849 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
7 View Details [658..756] ORFEUS 10.95 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
8 View Details [757..859] ORFEUS 10.95 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 2.76684454218635 bayes_pls_golite062009
  • binding
  • 2.71974493738804 bayes_pls_golite062009
  • transcription regulator activity
  • 1.96129657517284 bayes_pls_golite062009
  • protein binding
  • 1.6279032205159 bayes_pls_golite062009
  • nucleic acid binding
  • 1.62783430593918 bayes_pls_golite062009
  • DNA binding
  • 1.62663906748938 bayes_pls_golite062009
  • transcription factor activity
  • 0.934706586922936 bayes_pls_golite062009
  • transcription factor binding
  • 0.441518464573089 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.19094857768269 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle