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Protein Overview: MRD1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run NAF1 No Comments Hazbun TR, et al. (2003)
View Run NOP9 No Comments Hazbun TR, et al. (2003)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..113] PSI-BLAST 7.0 Nucleolin
2 View Details [114..316] MSA 1.132995 View MSA. No confident structure predictions are available.
3 View Details [317..423] PSI-BLAST 121.232149 Poly(A)-binding protein
4 View Details [424..528] PSI-BLAST 121.232149 Poly(A)-binding protein
5 View Details [529..627] PSI-BLAST 41.980454 Nucleolin
6 View Details [628..754] PSI-BLAST 97.40824 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
7 View Details [755..887] PSI-BLAST 97.40824 Nuclear ribonucleoprotein A1 (RNP A1, UP1)

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 6.04120049976231 bayes_pls_golite062009
  • mRNA binding
  • 4.29904003387927 bayes_pls_golite062009
  • nucleic acid binding
  • 3.81920018903278 bayes_pls_golite062009
  • binding
  • 3.44552682116509 bayes_pls_golite062009
  • 3.36965439092178 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.32565125258004 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.99190411806363 bayes_pls_golite062009
  • structural molecule activity
  • 1.29928829870122 bayes_pls_golite062009
  • transcription regulator activity
  • 1.07788694919471 bayes_pls_golite062009
  • protein binding
  • 1.02232785292059 bayes_pls_golite062009
  • DNA binding
  • 0.978604858165557 bayes_pls_golite062009
  • snoRNA binding
  • 0.87536768969411 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.764716918216811 bayes_pls_golite062009
  • snRNA binding
  • 0.45487108214667 bayes_pls_golite062009
  • transcription factor activity
  • 0.234742017105535 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • RNA binding
  • 6.04120049976231 bayes_pls_golite062009
  • mRNA binding
  • 4.29904003387927 bayes_pls_golite062009
  • nucleic acid binding
  • 3.81920018903278 bayes_pls_golite062009
  • binding
  • 3.44552682116509 bayes_pls_golite062009
  • 3.36965439092178 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.32565125258004 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.99190411806363 bayes_pls_golite062009
  • structural molecule activity
  • 1.29928829870122 bayes_pls_golite062009
  • transcription regulator activity
  • 1.07788694919471 bayes_pls_golite062009
  • protein binding
  • 1.02232785292059 bayes_pls_golite062009
  • DNA binding
  • 0.978604858165557 bayes_pls_golite062009
  • snoRNA binding
  • 0.87536768969411 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.764716918216811 bayes_pls_golite062009
  • snRNA binding
  • 0.45487108214667 bayes_pls_golite062009
  • transcription factor activity
  • 0.234742017105535 bayes_pls_golite062009
    4
    Term Confidence Notes
  • RNA binding
  • 6.04120049976231 bayes_pls_golite062009
  • mRNA binding
  • 4.29904003387927 bayes_pls_golite062009
  • nucleic acid binding
  • 3.81920018903278 bayes_pls_golite062009
  • binding
  • 3.44552682116509 bayes_pls_golite062009
  • 3.36965439092178 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.32565125258004 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.99190411806363 bayes_pls_golite062009
  • structural molecule activity
  • 1.29928829870122 bayes_pls_golite062009
  • transcription regulator activity
  • 1.07788694919471 bayes_pls_golite062009
  • protein binding
  • 1.02232785292059 bayes_pls_golite062009
  • DNA binding
  • 0.978604858165557 bayes_pls_golite062009
  • snoRNA binding
  • 0.87536768969411 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.764716918216811 bayes_pls_golite062009
  • snRNA binding
  • 0.45487108214667 bayes_pls_golite062009
  • transcription factor activity
  • 0.234742017105535 bayes_pls_golite062009
    5
    Term Confidence Notes
  • RNA binding
  • 6.04120049976231 bayes_pls_golite062009
  • mRNA binding
  • 4.29904003387927 bayes_pls_golite062009
  • nucleic acid binding
  • 3.81920018903278 bayes_pls_golite062009
  • binding
  • 3.44552682116509 bayes_pls_golite062009
  • 3.36965439092178 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.32565125258004 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.99190411806363 bayes_pls_golite062009
  • structural molecule activity
  • 1.29928829870122 bayes_pls_golite062009
  • transcription regulator activity
  • 1.07788694919471 bayes_pls_golite062009
  • protein binding
  • 1.02232785292059 bayes_pls_golite062009
  • DNA binding
  • 0.978604858165557 bayes_pls_golite062009
  • snoRNA binding
  • 0.87536768969411 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.764716918216811 bayes_pls_golite062009
  • snRNA binding
  • 0.45487108214667 bayes_pls_golite062009
  • transcription factor activity
  • 0.234742017105535 bayes_pls_golite062009
    6 No functions predicted.
    7 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle