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Protein Overview: NOB1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data NOB1 and SPC42 Unpublished Data
View Data NOB1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..177] MSA 15.041993 View MSA. No confident structure predictions are available.
2 View Details [178..459] MSA 1.015926 View MSA. No confident structure predictions are available.
3 View Details [223..386] PSI-BLAST 23.0 Solution Structure of RSGI RUH-035, a Zn-ribbon module in Mouse cDNA
4 View Details [387..459] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • nuclease activity
  • 2.0989149357263 bayes_pls_golite062009
  • DNA binding
  • 1.98330542087379 bayes_pls_golite062009
  • binding
  • 1.91435224223408 bayes_pls_golite062009
  • nucleic acid binding
  • 1.86243238793767 bayes_pls_golite062009
  • exonuclease activity
  • 1.7620419369992 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 1.74349203224875 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 1.68760157046614 bayes_pls_golite062009
  • endonuclease activity
  • 1.2840172881923 bayes_pls_golite062009
  • catalytic activity
  • 1.27951740231695 bayes_pls_golite062009
  • flap endonuclease activity
  • 1.17726395799783 bayes_pls_golite062009
  • endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 1.07360773846975 bayes_pls_golite062009
  • 5'-3' exonuclease activity
  • 0.974028111038185 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 0.867731336605067 bayes_pls_golite062009
  • hydrolase activity
  • 0.827276601361763 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.79417076649627 bayes_pls_golite062009
  • protein binding
  • 0.695466920831325 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
  • 0.267787854683683 bayes_pls_golite062009
  • exodeoxyribonuclease activity
  • 0.260397221344929 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • RNA binding
  • 2.67504868533195 bayes_pls_golite062009
  • binding
  • 2.1226043957694 bayes_pls_golite062009
  • nucleic acid binding
  • 1.26170105245043 bayes_pls_golite062009
  • protein binding
  • 0.874974846355882 bayes_pls_golite062009
  • catalytic activity
  • 0.316629025709297 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle