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Protein Overview: PNO1

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen YHR122W PNO1 2 Hazbun TR, et al. (2003)

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data PNO1 and SPC42 Unpublished Data

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..86] MSA 1.117995 View MSA. No confident structure predictions are available.
2 View Details [87..181] PSI-BLAST 13.39794 Far upstream binding element, FBP, KH3 and KH4 domains
3 View Details [182..274] PSI-BLAST 13.39794 Far upstream binding element, FBP, KH3 and KH4 domains

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • RNA binding
  • 6.07437653952404 bayes_pls_golite062009
  • mRNA binding
  • 4.07599584461947 bayes_pls_golite062009
  • nucleic acid binding
  • 3.68444148122352 bayes_pls_golite062009
  • binding
  • 3.31174833550232 bayes_pls_golite062009
  • 1.56143840583911 bayes_pls_golite062009
  • transcription regulator activity
  • 1.43703138180882 bayes_pls_golite062009
  • protein binding
  • 1.37279927568272 bayes_pls_golite062009
  • DNA binding
  • 1.20852534725468 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 0.9296581376632 bayes_pls_golite062009
  • transcription factor activity
  • 0.386248501195543 bayes_pls_golite062009
  • single-stranded RNA binding
  • 0.3686746342524 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.32222928997178 bayes_pls_golite062009
  • catalytic activity
  • 0.113112541746059 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.1069917291606 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle