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Protein Overview: NUP170

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data NUP170 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..75] deduced N/A No confident structure predictions are available.
2 View Details [76..1502] Pfam 1000.0 Non-repetitive/WGA-negative nucleoporin No confident structure predictions are available.
3 View Details [477..712] deduced N/A No confident structure predictions are available.
4 View Details [713..871] deduced N/A No confident structure predictions are available.
5 View Details [872..954] deduced N/A No confident structure predictions are available.
6 View Details [955..1016] MSA 1.037995 View MSA. No confident structure predictions are available.
7 View Details [1017..1152] MSA 1.039976 View MSA. No confident structure predictions are available.
8 View Details [1153..1349] deduced N/A No confident structure predictions are available.
9 View Details [1350..1502] MSA 2.037993 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • binding
  • 2.23598589443994 bayes_pls_golite062009
  • protein binding
  • 1.35242477415251 bayes_pls_golite062009
  • 1.27327168246392 bayes_pls_golite062009
  • transporter activity
  • 1.23232041140488 bayes_pls_golite062009
  • snoRNA binding
  • 1.22563757604746 bayes_pls_golite062009
  • protein transporter activity
  • 0.946697045757834 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.750051725890322 bayes_pls_golite062009
  • RNA binding
  • 0.658451712028574 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.442203655186701 bayes_pls_golite062009
  • structural molecule activity
  • 0.281751211382124 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.271959658140432 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.0245411309982146 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle