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Protein Overview: RNH1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RNH1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..47] PSI-BLAST 205.190949 N-terminal domain of RNase HI
2 View Details [48..175] PSI-BLAST 87.69897 HIV RNase H (Domain of reverse transcriptase); HIV-1 reverse transcriptase
3 View Details [176..348] PSI-BLAST 87.69897 HIV RNase H (Domain of reverse transcriptase); HIV-1 reverse transcriptase

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ribonuclease activity
  • 4.81599779544001 bayes_pls_golite062009
  • exoribonuclease activity
  • 3.01417328311605 bayes_pls_golite062009
  • ribonuclease H activity
  • 2.91966688044755 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 2.89077854960958 bayes_pls_golite062009
  • nuclease activity
  • 2.65398446409354 bayes_pls_golite062009
  • endonuclease activity
  • 2.63074055051349 bayes_pls_golite062009
  • endoribonuclease activity
  • 2.59247838057313 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 2.57498413015114 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 2.49957333962564 bayes_pls_golite062009
  • hydrolase activity
  • 2.41899414621161 bayes_pls_golite062009
  • exonuclease activity
  • 1.4327316829508 bayes_pls_golite062009
  • catalytic activity
  • 1.25233849524628 bayes_pls_golite062009
  • nucleic acid binding
  • 1.23371034593624 bayes_pls_golite062009
  • binding
  • 1.20709976964365 bayes_pls_golite062009
  • transcription regulator activity
  • 1.10433412699603 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 0.86862629020506 bayes_pls_golite062009
  • DNA binding
  • 0.860359347662869 bayes_pls_golite062009
  • endoribonuclease activity, producing 5'-phosphomonoesters
  • 0.708753843279937 bayes_pls_golite062009
  • endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.598360955770972 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.389326716045122 bayes_pls_golite062009
  • transcription factor activity
  • 0.332903382446869 bayes_pls_golite062009
  • protein binding
  • 0.242714557118293 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle