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Protein Overview: NHP10

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data NHP10 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..77] PSI-BLAST 8.045757 HMG1, domains A and B
2 View Details [78..203] PSI-BLAST 73.69897 NHP6a

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 3.47326864033978 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.71554076177339 bayes_pls_golite062009
  • DNA binding
  • 2.47408268953466 bayes_pls_golite062009
  • nucleic acid binding
  • 2.43458430104304 bayes_pls_golite062009
  • transcription regulator activity
  • 1.94466966241938 bayes_pls_golite062009
  • transcription factor binding
  • 1.70152980531918 bayes_pls_golite062009
  • chromatin binding
  • 1.63780144452084 bayes_pls_golite062009
  • transcription activator activity
  • 1.44874740508684 bayes_pls_golite062009
  • transcription repressor activity
  • 1.4027949566969 bayes_pls_golite062009
  • protein binding
  • 1.33904668423876 bayes_pls_golite062009
  • transcription factor activity
  • 1.12823770442876 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.837636448794941 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.67573816815318 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.341133967674497 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.113222211905324 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
  • 3.47326864033978 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.71554076177339 bayes_pls_golite062009
  • DNA binding
  • 2.47408268953466 bayes_pls_golite062009
  • nucleic acid binding
  • 2.43458430104304 bayes_pls_golite062009
  • transcription regulator activity
  • 1.94466966241938 bayes_pls_golite062009
  • transcription factor binding
  • 1.70152980531918 bayes_pls_golite062009
  • chromatin binding
  • 1.63780144452084 bayes_pls_golite062009
  • transcription activator activity
  • 1.44874740508684 bayes_pls_golite062009
  • transcription repressor activity
  • 1.4027949566969 bayes_pls_golite062009
  • protein binding
  • 1.33904668423876 bayes_pls_golite062009
  • transcription factor activity
  • 1.12823770442876 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.837636448794941 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.67573816815318 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.341133967674497 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.113222211905324 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle