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Protein Overview: SWC4

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run SWC4 No Comments Hazbun TR, et al. (2003)
View Run SWC4 No Comments Hazbun TR, et al. (2003)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SWC4 and SPC42 Hazbun TR, et al. (2003)
View Data SWC4 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..160] deduced N/A No confident structure predictions are available.
2 View Details [161..221] Pfam 3.568636 Myb-like DNA-binding domain No confident structure predictions are available.
3 View Details [222..476] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • histone acetyltransferase activity
  • 5.78270240334849 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
  • 5.78270240334849 bayes_pls_golite062009
  • N-acyltransferase activity
  • 4.53404381270892 bayes_pls_golite062009
  • N-acetyltransferase activity
  • 4.38345537045529 bayes_pls_golite062009
  • acetyltransferase activity
  • 3.81897719505269 bayes_pls_golite062009
  • acyltransferase activity
  • 3.35931919126926 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
  • 3.31384699789032 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
  • 3.09869056563841 bayes_pls_golite062009
  • transcription regulator activity
  • 3.05971315776284 bayes_pls_golite062009
  • DNA binding
  • 2.98143466641891 bayes_pls_golite062009
  • nucleic acid binding
  • 2.85666780317594 bayes_pls_golite062009
  • binding
  • 2.77786931095369 bayes_pls_golite062009
  • transcription factor activity
  • 2.3234819540139 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 1.5871271401402 bayes_pls_golite062009
  • chromatin binding
  • 1.46306211220814 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.23729321119532 bayes_pls_golite062009
  • protein deacetylase activity
  • 1.23476914879396 bayes_pls_golite062009
  • histone deacetylase activity
  • 1.18710646783152 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.02200659886159 bayes_pls_golite062009
  • protein binding
  • 1.00288283679871 bayes_pls_golite062009
  • transcription repressor activity
  • 0.700409976805769 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 0.658518317984762 bayes_pls_golite062009
  • transcription activator activity
  • 0.58607600202198 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.559482273209868 bayes_pls_golite062009
  • deacetylase activity
  • 0.534082291544628 bayes_pls_golite062009
  • histone binding
  • 0.489784140732052 bayes_pls_golite062009
  • transcription factor binding
  • 0.270053518126008 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.244471307852075 bayes_pls_golite062009
  • telomeric DNA binding
  • 0.233668696331578 bayes_pls_golite062009
  • DNA helicase activity
  • 0.192832786095412 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.151335943405565 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.0110175210304684 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle