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Protein Overview: SWI5

Protein Complex Data

View Details Ho Y, et al. (2002) ARP4 FAA2 HFI1 RPO31 SPT7 STB4 SWC4 SWI5 TRA1

Mass Spectrometry Data

The following runs contain data for this protein:

View Run RPA135 No Comments Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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View Data SWI5 Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..74] deduced N/A Confident ab initio structure predictions are available.
2 View Details [75..182] MSA 42.524997 View MSA. No confident structure predictions are available.
3 View Details [183..298] MSA 6.848995 View MSA. No confident structure predictions are available.
4 View Details [299..359] PSI-BLAST 3.69897 Enhancer binding protein
5 View Details [360..477] MSA 2.961995 View MSA. No confident structure predictions are available.
6 View Details [478..584] PSI-BLAST 126.228787 Five-finger GLI1
7 View Details [585..709] PSI-BLAST 117.39794 Designed zinc finger protein

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
Term Confidence Notes
  • nucleic acid binding
  • 2.36376512665406 bayes_pls_golite062009
  • DNA binding
  • 2.2458683155586 bayes_pls_golite062009
  • binding
  • 2.05464920186799 bayes_pls_golite062009
  • protein binding
  • 0.476896736636797 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.

    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle