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Protein Overview: YDR131C

General Information:
Name(s) found: YDR131C [SGD]
Description(s) found:
Found 25 descriptions.
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  • F-box protein, substrate-specific adaptor subunit that recruits substrates to a core ubiquitination complex [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 556 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [ISSLink to PubMed article]
    Biological Process: ubiquitin-dependent protein catabolic process [ISSLink to PubMed article]
    Molecular Function: protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDKLPYEIF KQIAWRIPQE DKISLTYVCK RSYESIIPFI YQNLFLNETY HINGDYDNSF  60
   61 GTCYWSVLNF HYIDEDDSNT KNDMSNRRLA KVKFSYFERT LAESPKRLCP LINRIRCTWH 120
  121 LNEDVMTNVL KLLSEYGSNL KFVDQFVRSS VNKGLEPLSK QLKTLTLTPP TLMPTHNSVS 180
  181 GSYLNKIDRL LLKCDLSRLE KLSIHINALK YFKNTGSPMK IKALVLNLRP DTLNLAEYDA 240
  241 SDDFLKELEY IDIFDASTLR QLEILSWYSR DDFPSGEEGG FDRLYVKWGL EGFWKFPNIE 300
  301 KLSLASLVYS EFFLMNCLAV FHNLKILKLD YMGKFDFDVS LINFLSKQVC GKKLQRFDIH 360
  361 CQLNHRLFFP MTDNPLTRLN FDGFCPCSTC KNTIHEVILK KIFPETRSKL LKNPNKFQAH 420
  421 NFFYQMFFEN KIMPYTNIID NESPAMGWDS VPIETFVRKF NENLQSTIEN TENITVNKIT 480
  481 REDAISLYHL YLHYLKDVFK VFEQSLPNLE YLTINGIPTK IIQVDELQRC AVPLFYNNGY 540
  541 KSNSVYELVD AEALFS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) ASR1 BOP2 CDC4 CDC53 FPR1 PRB1 RIX1 RPB11 RPB3 RPB9 RPO21 SGT1 SKP1 UFO1 YDR131C YRB2

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YDR131C YBR219C 2 Unpublished Fields Lab Data
    View Screen SKP1 YDR131C 2 Unpublished Fields Lab Data
    View Screen FLO5 YDR131C 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YDR131C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..556] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle