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Protein Overview: SWI4

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #02 Alpha Factor Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SWI4 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..165] PSI-BLAST 259.38764 DNA-binding domain of Mlu1-box binding protein MBP1
2 View Details [166..420] MSA 3.381996 View MSA. No confident structure predictions are available.
3 View Details [421..510] PSI-BLAST 26.154902 GA bindinig protein (GABP) beta 1
4 View Details [511..690] PSI-BLAST 127.457575 Swi6 ankyrin-repeat fragment
5 View Details [691..1093] MSA 30.801997 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 4.36949648004482 bayes_pls_golite062009
  • DNA binding
  • 4.06494205639151 bayes_pls_golite062009
  • nucleic acid binding
  • 3.98559547948274 bayes_pls_golite062009
  • transcription factor activity
  • 3.87642218322379 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 3.19892138828988 bayes_pls_golite062009
  • binding
  • 2.79149251200147 bayes_pls_golite062009
  • protein binding
  • 1.55473080522232 bayes_pls_golite062009
  • transcription repressor activity
  • 0.838109968340069 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • protein binding
  • 2.69918165732603 bayes_pls_golite062009
  • binding
  • 2.60916417202222 bayes_pls_golite062009
  • transcription regulator activity
  • 2.37103377984038 bayes_pls_golite062009
  • nucleic acid binding
  • 1.8957142857582 bayes_pls_golite062009
  • DNA binding
  • 1.78305438715057 bayes_pls_golite062009
  • transcription activator activity
  • 1.6418915400902 bayes_pls_golite062009
  • transcription factor activity
  • 1.2667825651547 bayes_pls_golite062009
  • transcription factor binding
  • 1.06366405671195 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.949906091645366 bayes_pls_golite062009
  • structural molecule activity
  • 0.648591660171134 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.63796241781934 bayes_pls_golite062009
  • structural constituent of cytoskeleton
  • 0.32425530306039 bayes_pls_golite062009
  • cyclin-dependent protein kinase regulator activity
  • 0.0462605323512499 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle