| General Information: |
|
| Name(s) found: |
RPA190 /
YOR341W
[SGD]
|
| Description(s) found:
Found 28 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 1664 amino acids |
Gene Ontology: |
|
| Cellular Component: |
DNA-directed RNA polymerase I complex
[TAS ]
|
| Biological Process: |
transcription from RNA polymerase I promoter
[TAS]
|
| Molecular Function: |
DNA-directed RNA polymerase activity
[TAS]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MDISKPVGSE ITSVDFGILT AKEIRNLSAK QITNPTVLDN LGHPVSGGLY DLALGAFLRN 60
61 LCSTCGLDEK FCPGHQGHIE LPVPCYNPLF FNQLYIYLRA SCLFCHHFRL KSVEVHRYAC 120
121 KLRLLQYGLI DESYKLDEIT LGSLNSSMYT DDEAIEDNED EMDGEGSKQS KDISSTLLNE 180
181 LKSKRSEYVD MAIAKALSDG RTTERGSFTA TVNDERKKLV HEFHKKLLSR GKCDNCGMFS 240
241 PKFRKDGFTK IFETALNEKQ ITNNRVKGFI RQDMIKKQKQ AKKLDGSNEA SANDEESFDV 300
301 GRNPTTRPKT GSTYILSTEV KNILDTVFRK EQCVLQYVFH SRPNLSRKLV KADSFFMDVL 360
361 VVPPTRFRLP SKLGEEVHEN SQNQLLSKVL TTSLLIRDLN DDLSKLQKDK VSLEDRRVIF 420
421 SRLMNAFVTI QNDVNAFIDS TKAQGRTSGK VPIPGVKQAL EKKEGLFRKH MMGKRVNYAA 480
481 RSVISPDPNI ETNEIGVPPV FAVKLTYPEP VTAYNIAELR QAVINGPDKW PGATQIQNED 540
541 GSLVSLIGMS VEQRKALANQ LLTPSSNVST HTLNKKVYRH IKNRDVVLMN RQPTLHKASM 600
601 MGHKVRVLPN EKTLRLHYAN TGAYNADFDG DEMNMHFPQN ENARAEALNL ANTDSQYLTP 660
661 TSGSPVRGLI QDHISAGVWL TSKDSFFTRE QYQQYIYGCI RPEDGHTTRS KIVTLPPTIF 720
721 KPYPLWTGKQ IITTVLLNVT PPDMPGINLI SKNKIKNEYW GKGSLENEVL FKDGALLCGI 780
781 LDKSQYGASK YGIVHSLHEV YGPEVAAKVL SVLGRLFTNY ITATAFTCGM DDLRLTAEGN 840
841 KWRTDILKTS VDTGREAAAE VTNLDKDTPA DDPELLKRLQ EILRDNNKSG ILDAVTSSKV 900
901 NAITSQVVSK CVPDGTMKKF PCNSMQAMAL SGAKGSNVNV SQIMCLLGQQ ALEGRRVPVM 960
961 VSGKTLPSFK PYETDAMAGG YVKGRFYSGI KPQEYYFHCM AGREGLIDTA VKTSRSGYLQ1020
1021 RCLTKQLEGV HVSYDNSIRD ADGTLVQFMY GGDAIDITKE SHMTQFEFCL DNYYALLKKY1080
1081 NPSALIEHLD VESALKYSKK TLKYRKKHSK EPHYKQSVKY DPVLAKYNPA KYLGSVSENF1140
1141 QDKLESFLDK NSKLFKSSDG VNEKKFRALM QLKYMRSLIN PGEAVGIIAS QSVGEPSTQM1200
1201 TLNTFHFAGH GAANVTLGIP RLREIVMTAS AAIKTPQMTL PIWNDVSDEQ ADTFCKSISK1260
1261 VLLSEVIDKV IVTETTGTSN TAGGNAARSY VIHMRFFDNN EYSEEYDVSK EELQNVISNQ1320
1321 FIHLLEAAIV KEIKKQKRTT GPDIGVAVPR LQTDVANSSS NSKRLEEDND EEQSHKKTKQ1380
1381 AVSYDEPDED EIETMREAEK SSDEEGIDSD KESDSDSEDE DVDMNEQINK SIVEANNNMN1440
1441 KVQRDRQSAI ISHHRFITKY NFDDESGKWC EFKLELAADT EKLLMVNIVE EICRKSIIRQ1500
1501 IPHIDRCVHP EPENGKRVLV TEGVNFQAMW DQEAFIDVDG ITSNDVAAVL KTYGVEAARN1560
1561 TIVNEINNVF SRYAISVSFR HLDLIADMMT RQGTYLAFNR QGMETSTSSF MKMSYETTCQ1620
1621 FLTKAVLDNE REQLDSPSAR IVVGKLNNVG TGSFDVLAKV PNAA |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample bob1 (2nd set) from october 2005 | McCusker D, et al (2007) | |
| View Run | #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #29 Asynchronous Prep5-TiO2 Flowthrough | Keck JM, et al. (2011) | |
| View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
| View Run | #02 Alpha Factor Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) | |
| View Run | #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #11 Mitotic Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..103] |  |
12.059991 | View MSA. No confident structure predictions are available. |
| 2 | View Details | [104..1664] | |
1986.9897 | RBP1 |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)
