From Publication: | Gavin A.C. et al. (2002) Abstract Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature. 2002 Jan 10;415(6868):141-7. |
Notes: | From the published set of protein complexes. |
Complex Size: | 50 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
transcription factor TFIID complex | 3.1208E-33 | 50 | 15 | 15 | 6292 |
nucleoplasm part | 3.0395E-27 | 50 | 245 | 28 | 6292 |
nucleoplasm | 2.5945E-26 | 50 | 264 | 28 | 6292 |
DNA-directed RNA polymerase II, holoenzyme | 7.6039E-24 | 50 | 56 | 17 | 6292 |
SAGA complex | 4.3726E-23 | 50 | 22 | 13 | 6292 |
SAGA-type complex | 1.0002E-22 | 50 | 23 | 13 | 6292 |
nuclear lumen | 2.562E-22 | 50 | 453 | 30 | 6292 |
SLIK (SAGA-like) complex | 1.0435E-20 | 50 | 16 | 11 | 6292 |
histone acetyltransferase complex | 5.3244E-20 | 50 | 44 | 14 | 6292 |
transcription factor complex | 2.1264E-18 | 50 | 71 | 15 | 6292 |
protein complex | 6.1166E-18 | 50 | 1137 | 37 | 6292 |
organelle lumen | 1.3975E-17 | 50 | 660 | 30 | 6292 |
intracellular organelle lumen | 1.3975E-17 | 50 | 660 | 30 | 6292 |
membrane-enclosed lumen | 7.3995E-17 | 50 | 700 | 30 | 6292 |
nuclear part | 3.4356E-15 | 50 | 1103 | 34 | 6292 |
macromolecular complex | 1.6372E-13 | 50 | 1635 | 38 | 6292 |
nucleus | 1.0241E-8 | 50 | 2041 | 36 | 6292 |
intracellular organelle part | 5.6026E-8 | 50 | 2282 | 37 | 6292 |
organelle part | 5.6026E-8 | 50 | 2282 | 37 | 6292 |
Ada2/Gcn5/Ada3 transcription activator complex | 4.6705E-6 | 50 | 5 | 3 | 6292 |
intracellular part | 5.6376E-4 | 50 | 4938 | 48 | 6292 |
membrane-bounded organelle | 7.0447E-4 | 50 | 3771 | 41 | 6292 |
intracellular membrane-bounded organelle | 7.0447E-4 | 50 | 3771 | 41 | 6292 |
intracellular | 7.685E-4 | 50 | 4975 | 48 | 6292 |
intracellular organelle | 2.0912E-3 | 50 | 4070 | 42 | 6292 |
organelle | 2.106E-3 | 50 | 4071 | 42 | 6292 |
DNA helicase complex | 3.2518E-3 | 50 | 11 | 2 | 6292 |
Ino80 complex | 3.2518E-3 | 50 | 11 | 2 | 6292 |
DNA-directed RNA polymerase II, core complex | 3.8824E-3 | 50 | 12 | 2 | 6292 |
cell part | 4.2239E-3 | 50 | 5397 | 49 | 6292 |
cell | 4.2932E-3 | 50 | 5399 | 49 | 6292 |
myosin II complex | 7.9466E-3 | 50 | 1 | 1 | 6292 |
mediator complex | 8.7307E-3 | 50 | 18 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.