| General Information: |
|
| Name(s) found: |
LOS1 /
YKL205W
[SGD]
|
| Description(s) found:
Found 24 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 1100 amino acids |
Gene Ontology: |
|
| Cellular Component: |
mitochondrion
[IDA ]
nuclear matrix [IDA ]
|
| Biological Process: |
tRNA export from nucleus
[IMP]
tRNA splicing, via endonucleolytic cleavage and ligation [IMP ]
|
| Molecular Function: |
tRNA binding
[TAS]
Ran GTPase binding [IDA ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MLERIQQLVN AVNDPRSDVA TKRQAIELLN GIKSSENALE IFISLVINEN SNDLLKFYGL 60
61 STLIELMTEG VNANPNGLNL VKFEITKWLK FQVLGNKQTK LPDFLMNKIS EVLTTLFMLM 120
121 YSDCNGNQWN SFFDDLMSLF QVDSAISNTS PSTDGNILLG LEFFNKLCLM INSEIADQSF 180
181 IRSKESQLKN NNIKDWMRDN DIMKLSNVWF QCLKLDEQIV SQCPGLINST LDCIGSFISW 240
241 IDINLIIDAN NYYLQLIYKF LNLKETKISC YNCILAIISK KMKPMDKLAF LNMINLTNEL 300
301 TYYHQAISMN PQIITFDNLE VWESLTKLIT SFGIEFTIII EQVNDDQKLD TLYKQSVISN 360
361 VDSILLEKII PILLEFMNNE FDSITAKTFP FWSNYLAFLK KYKASSPNFV PLHKDFLDNF 420
421 QQICFKRMKF SDDEVTQDDF EEFNETVRFK LKNFQEIIVV IDPSLFLNNI SQEISANLMN 480
481 CKNESWQIFE LTIYQIFNLS ECTKNNYFGL NKNEIMTSQP SLTLVRFLNE LLMMKDFLLA 540
541 IDNEQIQILF MELIVKNYNF IFSTSANTAN ATDDDEKYLL ILNIFMSSFA MFNKRENVRL 600
601 RSWYLFTRFL KLTRINLKKI LFANKNLVNE ITNKISPLLH IKVTSINAQG TDDNDTIFDN 660
661 QLYIFEGIGF IITLNNSSQE LTAATANTPI DYDILDQILT PLFTQLEGCI TQGASPVVIL 720
721 ECHHILMAIG TLARGLHIGL VPENQVNNMV VNKKLINDSL IHKFSNIAEV ILVTFSFFNK 780
781 FENIRDASRF TFARLIPILS NKILPFINKL IELILSSTDL KSWEMIDFLG FLSQLIHMFH 840
841 TDTDCYQLFN QLLTPLINKV HSIIEEIDEQ HDQQSSSNKP IDTAVTATSV NKNIVVTDSY 900
901 RDKILLKKAY CTFLQSFTNN SVTSILLSDI NRAILPVILN DLVTYTPQEI QETSMMKVSL 960
961 NVLCNFIKCF GNGTCLDNDD INKDPNLKID GLNEYFIMKC VPIIFEIPFN PIYKFNIKEG1020
1021 NFKTMAYDLA RLLRELFIVS SNPTTNENEC VKYLTQIYLP QIQLPQELTI QLVNMLTTMG1080
1081 QKQFEKWFVD NFISVLKQGQ |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
LOS1 SEN15 SEN2 SEN34 SEN54 STP1 STP2 STP3 STP4 TPT1 TRL1 |
| View Details | Ho Y, et al. (2002) |
|
ATP4 FAA4 FET3 GCD1 GCD11 GCD2 GCD6 GCD7 GCN1 GCN3 LOS1 MET18 NMD5 POL5 PRO3 RVB1 SCW4 SEC7 SUI3 TMA19 UBA1 UBC6 UTP20 VAC8 VMA8 YPT1 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | 3906: TAP-tagged | Green EM, et al (2005) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..434] |  |
11.053947 | View MSA. No confident structure predictions are available. |
| 2 | View Details | [435..516] | |
N/A | Confident ab initio structure predictions are available. |
| 3 | View Details | [517..1100] | |
1.014975 | View MSA. No confident structure predictions are available. |
| 4 | View Details | [1013..1100] | |
1.031986 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.97 |
Source: Reynolds et al. (2008)