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Protein Overview: RRF1

General Information:
Name(s) found: RRF1 / YHR038W [SGD]
Description(s) found:
Found 23 descriptions.
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  • Mitochondrial ribosome recycling factor, essential for mitochondrial protein synthesis and for the maintenance of the respiratory function of mitochondria [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 230 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed articleLink to PubMed article][ISSLink to PubMed article]
    Biological Process: translation [IMPLink to PubMed article][ISSLink to PubMed article]
    Molecular Function: translation termination factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILTTARLNC RPVTVPRLFN RSFSQSFIIL KKKSSTPTEK VEEDEIDVNE LLKKAETQFK  60
   61 KTLEIQKQKM NEIKQGNFNP KVFNSLVFKN NRKFTDIATT SLKGKNALLI TVFDPKDVKT 120
  121 VISGVLAANL NLTPERVPNN DLQLKVSLPP PTTESRLKVA KDLKRVFEEY KQSSLKDSLG 180
  181 TIRGSILKEF KSFKKDDAVR KAERDLEKLH KDYVNKLHDQ FQKVEKSIVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen TEM1 RRF1 2 Uetz P, et al. (2000)

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data RRF1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74]
    [151..230]    		 PSI-BLAST 118.502279 Ribosome recycling factor, RRF
    2 View Details [75..150] PSI-BLAST 118.502279 Ribosome recycling factor, RRF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation regulator activity
    		•  4.3587179630028 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  4.16037247039451 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.46266898174641 bayes_pls_golite062009
  • binding
    		•  2.50924072655137 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle