YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TUM1

General Information:
Name(s) found: TUM1 / YOR251C [SGD]
Description(s) found:
Found 29 descriptions.
SHOW ALL
  • Mitochondrial protein, required for formation of the 2-thio group of the 5-methoxycarbonylmethyl-2-thiouridine modified base in some tRNAs; has similarity to mammalian thiosulfate sulfurtransferase (rhodanese) [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 304 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: thiosulfate sulfurtransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLFDLISPK AFVKLVASEK VHRIVPVDAT WYLPSWKLDN KVDFLTKPRI PNSIFFDIDA  60
   61 ISDKKSPYPH MFPTKKVFDD AMSNLGVQKD DILVVYDRVG NFSSPRCAWT LGVMGHPKVY 120
  121 LLNNFNQYRE FKYPLDSSKV AAFSPYPKSH YESSESFQDK EIVDYEEMFQ LVKSGELAKK 180
  181 FNAFDARSLG RFEGTEPEPR SDIPSGHIPG TQPLPYGSLL DPETKTYPEA GEAIHATLEK 240
  241 ALKDFHCTLD PSKPTICSCG TGVSGVIIKT ALELAGVPNV RLYDGSWTEW VLKSGPEWIA 300
  301 ENRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data TUM1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 388.37734 Rhodanese
    2 View Details [159..304] PSI-BLAST 388.37734 Rhodanese

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • thiosulfate sulfurtransferase activity
    		•  4.07143118207301 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  2.90539767285523 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  2.27106357502695 bayes_pls_golite062009
  • protein tyrosine phosphatase activity
    		•  0.83774799640503 bayes_pls_golite062009
  • binding
    		•  0.707400650337243 bayes_pls_golite062009
  • catalytic activity
    		•  0.687308230067573 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  0.604322283158386 bayes_pls_golite062009
  • transferase activity
    		•  0.302497611306574 bayes_pls_golite062009
  • protein binding
    		•  0.26324773851743 bayes_pls_golite062009
  • phosphatase activity
    		•  0.0565207759893606 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle