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Protein Overview: SRO9

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run ASF1 sample 3928 - Asf1-S-TEV-ZZ (in hir3delta mutant) Green EM, et al (2005)
View Run VAM3 hx23: mixture in detergent (control) Investigating Vam3p, Nyv1p and their partners in trans-SNARE complex Hao Xu, et al. (2010)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen PHO85 SRO9 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SRO9 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..199] MSA 8.141997 View MSA. No confident structure predictions are available.
2 View Details [200..250] deduced N/A No confident structure predictions are available.
3 View Details [251..434] PSI-BLAST 20.69897 NMR structure of the La motif of human La protein

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • transcription regulator activity
  • 3.16805061653531 bayes_pls_golite062009
  • nucleic acid binding
  • 3.10560219735181 bayes_pls_golite062009
  • DNA binding
  • 2.97348943886804 bayes_pls_golite062009
  • structural constituent of ribosome
  • 2.95301685898669 bayes_pls_golite062009
  • structural molecule activity
  • 2.70976099158766 bayes_pls_golite062009
  • binding
  • 2.29601364076827 bayes_pls_golite062009
  • transcription factor activity
  • 2.27922300995509 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.93130370844712 bayes_pls_golite062009
  • transcription activator activity
  • 0.782193398686323 bayes_pls_golite062009
  • transcription repressor activity
  • 0.67795138236883 bayes_pls_golite062009
  • RNA binding
  • 0.345456982950223 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.10854873707001 bayes_pls_golite062009
  • protein binding
  • 0.057263185425224 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle