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Protein Overview: KRS1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RBA50 No Comments Hazbun TR, et al. (2003)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..220] PSI-BLAST 1121.0103 Lysyl-tRNA synthetase (LysRS)
2 View Details [221..591] PSI-BLAST 1121.0103 Lysyl-tRNA synthetase (LysRS)

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 7.89468709683036 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 7.89468709683036 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 7.88410036819636 bayes_pls_golite062009
  • ligase activity
  • 6.92073480193262 bayes_pls_golite062009
  • lysine-tRNA ligase activity
  • 5.79033103181143 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
  • 3.80084837437429 bayes_pls_golite062009
  • phenylalanine-tRNA ligase activity
  • 2.99105702052936 bayes_pls_golite062009
  • serine-tRNA ligase activity
  • 2.46505535069103 bayes_pls_golite062009
  • structural constituent of ribosome
  • 2.43759174701552 bayes_pls_golite062009
  • glycine-tRNA ligase activity
  • 2.29229136935761 bayes_pls_golite062009
  • threonine-tRNA ligase activity
  • 2.18642354927 bayes_pls_golite062009
  • structural molecule activity
  • 2.08258913217268 bayes_pls_golite062009
  • catalytic activity
  • 1.99372273395202 bayes_pls_golite062009
  • alanine-tRNA ligase activity
  • 1.82594054955281 bayes_pls_golite062009
  • histidine-tRNA ligase activity
  • 1.72215103383322 bayes_pls_golite062009
  • transcription regulator activity
  • 1.67362693618722 bayes_pls_golite062009
  • binding
  • 1.54403712698597 bayes_pls_golite062009
  • nucleic acid binding
  • 1.48056625237411 bayes_pls_golite062009
  • DNA binding
  • 1.44496421928708 bayes_pls_golite062009
  • translation initiation factor activity
  • 0.96756670903925 bayes_pls_golite062009
  • asparagine-tRNA ligase activity
  • 0.921492123574877 bayes_pls_golite062009
  • transcription factor activity
  • 0.825973629967327 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.77755643935497 bayes_pls_golite062009
  • ribonuclease activity
  • 0.702449673647117 bayes_pls_golite062009
  • nuclease activity
  • 0.111225677144242 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle