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Bait Protein: RPA135
Organism: Saccharomyces cerevisiae
Publication: Schneider DA, French SL, Osheim YN, Bailey AO, Vu L, Dodd J, Yates JR, Beyer AL, Nomura M. RNA polymerase II elongation factors Spt4p and Spt5p play roles in transcription elongation by RNA polymerase I and rRNA processing. Proc Natl Acad Sci U S A. 2006;103(34):12707-12.
Comments: his-HA tag on RPA135

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  Hit Protein Protein Desc Sequence Count Spectrum Count Sequence Coverage NSAF Mol. Wt.
[View Peptides]   AIM2 Cytoplasmic protein involved in mitochondrial function or organization; null mutant displays reduced... 22 49 78.5% 0.0156 27089
[View Peptides]   MXR1 Methionine-S-sulfoxide reductase, involved in the response to oxidative stress; protects iron-sulfur... 12 21 71.2% 0.00893 21141
[View Peptides]   ADH1 Alcohol dehydrogenase, fermentative isozyme active as homo- or heterotetramers; required for the red... 35 135 66.4% 0.0303 36849
[View Peptides]   RPC19 RNA polymerase subunit AC19, common to RNA polymerases I and III 6 10 66.2% 0.00551 16151
[View Peptides]   RNR1 One of two large regulatory subunits of ribonucleotide-diphosphate reductase; the RNR complex cataly... 56 147 65.4% 0.0129 99561
[View Peptides]   RPC40 RNA polymerase subunit AC40, common to RNA polymerase I and III 21 37 65.1% 0.00864 37687
[View Peptides]   RPA12 RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is resp... 6 11 60.8% 0.00688 13661
[View Peptides]   RPE1 D-ribulose-5-phosphate 3-epimerase, catalyzes a reaction in the non-oxidative part of the pentose-ph... 8 9 59.2% 0.00296 25967
[View Peptides]   RPB10 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III 2 3 54.3% 0.00335 8278
[View Peptides]   ASP1 Cytosolic L-asparaginase, involved in asparagine catabolism 19 41 54.1% 0.00842 41395
[View Peptides]   RPP2B Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction ... 3 3 53.6% 0.00213 11050
[View Peptides]   RPA135 RNA polymerase I second largest subunit A135 47 91 51.1% 0.00592 135742
[View Peptides]   SSE1 ATPase that is a component of the heat shock protein Hsp90 chaperone complex; binds unfolded protein... 36 53 50.6% 0.00598 77367
[View Peptides]   RPP2A Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction... 7 8 49.1% 0.0059 10746
[View Peptides]   CAB4 Probable pantetheine-phosphate adenylyltransferase (PPAT), which catalyzes the fourth step in the bi... 13 22 48.5% 0.00564 34307
[View Peptides]   GIS2 Protein with seven cysteine-rich CCHC zinc-finger motifs, similar to human CNBP, proposed to be invo... 5 5 47.7% 0.00256 17103
[View Peptides]   YPR137C-A, YAR010C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 18 35 45.9% 0.00622 49072
[View Peptides]   YPR137C-A, YAR010C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 18 35 45.9% 0.00622 49072
[View Peptides]   YJR028W Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 18 35 45.9% 0.00622 49112
[View Peptides]   YDR261C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YDRCTY1-3 TYB is mutant and probably no... 18 35 45.9% 0.00622 49009
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 48953
[View Peptides]   YPR158C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 48965
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 48953
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 48993
[View Peptides]   YLR256W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 49003
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 48993
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 48953
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 48993
[View Peptides]   YGR027W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 49056
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 19 35 45.9% 0.00622 48953
[View Peptides]   RPA190 RNA polymerase I largest subunit A190 63 115 44.5% 0.00541 186431
[View Peptides]   HEM2 Aminolevulinate dehydratase, a homo-octameric enzyme, catalyzes the conversion of 5-aminolevulinate ... 8 8 44.4% 0.00183 37740
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 23 42 44.3% 0.00717 50033
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 23 42 44.3% 0.00717 50033
[View Peptides]   CCS1 Copper chaperone for superoxide dismutase Sod1p, involved in oxidative stress protection; Met-X-Cys-... 11 21 44.2% 0.0066 27330
[View Peptides]   RPP0 Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e; shown to be phosphoryl... 14 17 43.9% 0.00426 33717
[View Peptides]   RPA49 RNA polymerase I subunit A49 17 30 43.6% 0.00565 46651
[View Peptides]   PET191 Protein required for assembly of cytochrome c oxidase; exists as an oligomer that is integral to the... 3 3 43.5% 0.00217 12394
[View Peptides]   YDL086W Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi... 10 10 43.2% 0.00287 30837
[View Peptides]   YOL103W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 17 29 41.8% 0.00516 49005
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 17 34 41.1% 0.00604 49129
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 17 34 41.1% 0.00604 49129
[View Peptides]   YML045W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 17 34 41.1% 0.00604 49122
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 17 34 41.1% 0.00604 49129
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 17 34 41.1% 0.00604 49129
[View Peptides]   YDR098C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 18 34 41.1% 0.00604 49057
[View Peptides]   YGR038C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 18 34 41.1% 0.00604 49034
[View Peptides]   FUR1 Uracil phosphoribosyltransferase, synthesizes UMP from uracil; involved in the pyrimidine salvage pa... 5 6 40.7% 0.00217 24594
[View Peptides]   HSC82 Cytoplasmic chaperone of the Hsp90 family, redundant in function and nearly identical with Hsp82p, a... 24 27 40.1% 0.003 80900
[View Peptides]   BMH2 14-3-3 protein, minor isoform; controls proteome at post-transcriptional level, binds proteins and D... 7 9 39.6% 0.00258 31061
[View Peptides]   YHR214C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 17 34 38.9% 0.00556 53326
[View Peptides]   UBC4 Ubiquitin-conjugating enzyme (E2), mediates degradation of abnormal or excess proteins, including ca... 2 3 37.8% 0.00159 16456
[View Peptides]   SSC1 Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitoc... 22 28 37.6% 0.00335 70628
[View Peptides]   PDC1 Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates... 12 18 37.5% 0.0025 61495
[View Peptides]   YBR012W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 16 32 37.0% 0.00569 49068
[View Peptides]   YOR142W-A, YPR158W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 16 32 37.0% 0.00569 49098
[View Peptides]   YOR142W-A, YPR158W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 16 32 37.0% 0.00569 49098
[View Peptides]   YDR210C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 15 32 36.6% 0.00569 49187
[View Peptides]   GPD2 NAD-dependent glycerol 3-phosphate dehydrogenase, homolog of Gpd1p, expression is controlled by an o... 9 11 36.4% 0.00196 49422
[View Peptides]   FAS1 Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty a... 59 86 36.2% 0.00328 228689
[View Peptides]   YNL054W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 13 27 35.9% 0.0048 49232
[View Peptides]   FAS2 Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty ... 44 56 35.6% 0.00232 206945
[View Peptides]   RPA43 RNA polymerase I subunit A43 10 19 35.3% 0.00456 36224
[View Peptides]   ENO2 Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosp... 9 15 34.6% 0.00268 46914
[View Peptides]   MIC17 Mitochondrial intermembrane space protein, required for normal oxygen consumption; contains twin cys... 2 2 32.7% 0.001 16669
[View Peptides]   HSP82 Hsp90 chaperone required for pheromone signaling and negative regulation of Hsf1p; docks with Tom70p... 18 20 32.2% 0.00221 81406
[View Peptides]   BMH1 14-3-3 protein, major isoform; controls proteome at post-transcriptional level, binds proteins and D... 6 8 31.8% 0.00234 30091
[View Peptides]   HIS4 Multifunctional enzyme containing phosphoribosyl-ATP pyrophosphatase, phosphoribosyl-AMP cyclohydrol... 16 16 30.7% 0.00157 87721
[View Peptides]   YEF3 Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes b... 20 27 30.1% 0.00202 115945
[View Peptides]   LPD1 Dihydrolipoamide dehydrogenase, the lipoamide dehydrogenase component (E3) of the pyruvate dehydroge... 8 9 28.9% 0.00141 54010
[View Peptides]   YOL159C-A Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast ... 2 3 28.9% 0.00261 10933
[View Peptides]   ENO1 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph... 7 13 28.6% 0.00233 46816
[View Peptides]   RPB5 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects tra... 8 17 28.4% 0.00618 25079
[View Peptides]   ACO1 Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitoc... 13 16 28.3% 0.00161 85368
[View Peptides]   RPP1A Ribosomal stalk protein P1 alpha, involved in the interaction between translational elongation facto... 2 2 28.3% 0.00148 10908
[View Peptides]   CDC8 Thymidylate and uridylate kinase, functions in de novo biosynthesis of pyrimidine deoxyribonucleotid... 3 4 28.2% 0.00145 24687
[View Peptides]   PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from ... 6 6 27.1% 0.0013 39566
[View Peptides]   RPA14 RNA polymerase I subunit A14 2 2 27.0% 0.00114 14585
[View Peptides]   YER138C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 32 51 26.7% 0.00227 198561
[View Peptides]   YML039W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 32 51 26.7% 0.00227 198571
[View Peptides]   CDC19 Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvat... 13 17 26.4% 0.00266 54545
[View Peptides]   ISA1 Mitochondrial matrix protein involved in biogenesis of the iron-sulfur (Fe/S) cluster of Fe/S protei... 3 3 26.0% 9.39E-4 27675
[View Peptides]   ALD6 Cytosolic aldehyde dehydrogenase, activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; re... 11 12 25.8% 0.00188 54414
[View Peptides]   YOL103W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 30 45 25.7% 0.00201 198613
[View Peptides]   YJR027W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 30 48 25.4% 0.00214 198651
[View Peptides]   YPL257W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 31 50 25.4% 0.00223 198575
[View Peptides]   HSP60 Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides... 14 20 25.2% 0.00273 60752
[View Peptides]   CCW14 Covalently linked cell wall glycoprotein, present in the inner layer of the cell wall 3 4 25.2% 0.00131 23268
[View Peptides]   ACT1 Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functio... 4 4 25.1% 8.34E-4 41690
[View Peptides]   YPR137C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 31 50 24.7% 0.00223 198567
[View Peptides]   YLR157C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 30 49 24.7% 0.00218 198544
[View Peptides]   TSA1 Thioredoxin peroxidase, acts as both a ribosome-associated and free cytoplasmic antioxidant; self-as... 5 8 24.5% 0.00319 21590
[View Peptides]   DET1 Acid phosphatase involved in the non-vesicular transport of sterols in both directions between the e... 6 9 24.3% 0.00211 39172
[View Peptides]   KGD1 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step... 16 17 24.0% 0.00131 114416
[View Peptides]   YJR029W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 30 49 23.6% 0.00218 198616
[View Peptides]   YDR261C-D Retrotransposon TYA Gag and TYB Pol genes; in YDRCTY1-3 TYB is mutant and probably non-functional 28 47 23.6% 0.00229 181660
[View Peptides]   YLR227W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 30 48 23.5% 0.00214 198404
[View Peptides]   HRK1 Protein kinase implicated in activation of the plasma membrane H(+)-ATPase Pma1p in response to gluc... 12 20 22.7% 0.00206 85696
[View Peptides]   YPR158C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 29 47 22.5% 0.00209 198373
[View Peptides]   YGR027W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 28 46 22.3% 0.00205 198656
[View Peptides]   YAP3 Basic leucine zipper (bZIP) transcription factor 5 6 22.1% 0.00142 37955
[View Peptides]   YDR365W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 28 46 22.0% 0.00205 198658
[View Peptides]   YER160C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 28 47 21.8% 0.00209 198568
[View Peptides]   YML045W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 28 47 21.8% 0.00209 198524
[View Peptides]   YGR161C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 28 47 21.8% 0.00209 198558
[View Peptides]   YMR050C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 28 47 21.8% 0.00209 198554
[View Peptides]   YNL054W-B TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are req... 25 41 21.7% 0.00183 198197
[View Peptides]   YHR214C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 28 47 21.6% 0.00205 202816
[View Peptides]   YDR210C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 27 46 21.0% 0.00205 198838
[View Peptides]   YBR012W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 27 44 20.8% 0.00196 198868
[View Peptides]   YOR142W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 27 45 20.8% 0.00201 198535
[View Peptides]   YPR158W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 27 45 20.8% 0.002 198637
[View Peptides]   YDR316W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 27 46 20.5% 0.00205 198526
[View Peptides]   YDR098C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 26 45 20.3% 0.00201 198594
[View Peptides]   YGR038C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 26 45 20.3% 0.00201 198520
[View Peptides]   BNA2 Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynt... 6 10 20.1% 0.00173 50775
[View Peptides]   RIB3 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), required for riboflavin biosynthesis ... 2 2 19.7% 7.52E-4 22568
[View Peptides]   HYP2 Translation elongation factor eIF-5A, previously thought to function in translation initiation; simi... 9 14 19.7% 0.00698 17114
[View Peptides]   NBP35 Essential iron-sulfur cluster binding protein localized in the cytoplasm; forms a complex with Cfd1p... 2 2 19.5% 4.77E-4 35253
[View Peptides]   ILV6 Regulatory subunit of acetolactate synthase, which catalyzes the first step of branched-chain amino ... 3 4 19.4% 0.00101 33987
[View Peptides]   ISU1 Conserved protein of the mitochondrial matrix, performs a scaffolding function during assembly of ir... 2 2 19.4% 9.48E-4 17895
[View Peptides]   PGK1 3-phosphoglycerate kinase, catalyzes transfer of high-energy phosphoryl groups from the acyl phospha... 5 6 19.2% 0.00113 44738
[View Peptides]   KAR2 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i... 12 12 18.9% 0.00138 74468
[View Peptides]   KAR2 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i... 12 12 18.9% 0.00138 74468
[View Peptides]   ISA2 Protein required for maturation of mitochondrial and cytosolic Fe/S proteins, localizes to the mitoc... 2 5 18.9% 0.00211 20877
[View Peptides]   ADH2 Glucose-repressible alcohol dehydrogenase II, catalyzes the conversion of ethanol to acetaldehyde; i... 8 45 18.7% 0.0101 36732
[View Peptides]   IMD3 Inosine monophosphate dehydrogenase, catalyzes the first step of GMP biosynthesis, member of a four-... 5 6 18.5% 8.97E-4 56585
[View Peptides]   RPB8 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III 3 4 18.5% 0.00214 16511
[View Peptides]   RNR3 One of two large regulatory subunits of ribonucleotide-diphosphate reductase; the RNR complex cataly... 15 38 18.3% 0.00342 97515
[View Peptides]   RPA34 RNA polymerase I subunit A34.5 3 6 17.6% 0.00201 26875
[View Peptides]   SBP1 Putative RNA binding protein; involved in translational repression and found in cytoplasmic P bodies... 3 3 17.3% 7.98E-4 32990
[View Peptides]   ASC1 G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p; ortholog of RACK1 th... 3 3 17.2% 7.36E-4 34805
[View Peptides]   HXK2 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol; predominant hexokin... 4 4 17.1% 6.44E-4 53943
[View Peptides]   GCV3 H subunit of the mitochondrial glycine decarboxylase complex, required for the catabolism of glycine... 2 2 16.5% 9.2E-4 18795
[View Peptides]   YBL005W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 16 21 16.0% 9.36E-4 198968
[View Peptides]   EFB1 Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP fo... 2 3 16.0% 0.00114 22627
[View Peptides]   KCS1 Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; generation of high ener... 8 9 15.8% 6.7E-4 119550
[View Peptides]   FRA1 Protein involved in negative regulation of transcription of iron regulon; forms an iron independent ... 10 16 15.8% 0.00167 84924
[View Peptides]   YDR132C Putative protein of unknown function 3 3 15.8% 4.74E-4 57194
[View Peptides]   BNA7 Formylkynurenine formamidase, involved in the de novo biosynthesis of NAD from tryptophan via kynure... 2 2 15.7% 5.99E-4 29991
[View Peptides]   SAH1 S-adenosyl-L-homocysteine hydrolase, catabolizes S-adenosyl-L-homocysteine which is formed after don... 5 5 15.6% 8.71E-4 49126
[View Peptides]   TOS1 Covalently-bound cell wall protein of unknown function; identified as a cell cycle regulated SBF tar... 4 5 15.6% 8.6E-4 47994
[View Peptides]   YBL005W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 4 7 15.5% 0.00124 49285
[View Peptides]   YMR046C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 4 7 15.5% 0.00124 49274
[View Peptides]   YAR009C Retrotransposon TYA Gag and TYB Pol genes; in YARCTY1-1 TYB is mutant and probably non-functional 9 11 15.4% 7.19E-4 136732
[View Peptides]   YDJ1 Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein trans... 2 4 14.9% 7.65E-4 44671
[View Peptides]   SDH1 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxid... 4 4 14.7% 4.89E-4 70229
[View Peptides]   CTT1 Cytosolic catalase T, has a role in protection from oxidative damage by hydrogen peroxide 5 5 14.7% 6.83E-4 65742
[View Peptides]   IMD2 Inosine monophosphate dehydrogenase, catalyzes the rate-limiting step in GTP biosynthesis, expressio... 4 5 14.7% 7.48E-4 56530
[View Peptides]   SDH2 Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples t... 3 3 14.7% 8.82E-4 30231
[View Peptides]   FBA1 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis; catalyzes conversio... 3 4 14.5% 8.72E-4 39621
[View Peptides]   YMR045C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 15 21 14.4% 9.36E-4 198898
[View Peptides]   CCT2 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assemb... 4 4 14.4% 5.94E-4 57203
[View Peptides]   DCS1 Non-essential hydrolase involved in mRNA decapping, may function in a feedback mechanism to regulate... 3 4 14.3% 8.94E-4 40770
[View Peptides]   YPL260W Putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion pr... 4 4 14.2% 5.68E-4 62780
[View Peptides]   PFK1 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaer... 8 8 13.8% 6.34E-4 107970
[View Peptides]   LAP4 Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often... 4 5 13.8% 7.61E-4 57093
[View Peptides]   ERG13 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-Co... 4 4 13.6% 6.37E-4 55014
[View Peptides]   PAN5 2-dehydropantoate 2-reductase, part of the pantothenic acid pathway, structurally homologous to E. c... 3 4 13.5% 8.26E-4 42821
[View Peptides]   SIT4 Type 2A-related serine-threonine phosphatase that functions in the G1/S transition of the mitotic cy... 2 2 13.5% 5.03E-4 35538
[View Peptides]   LAT1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes... 7 8 13.3% 0.0013 51818
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 8 10 13.2% 9.29E-4 93289
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 8 10 13.2% 9.29E-4 93289
[View Peptides]   FOL2 GTP-cyclohydrolase I, catalyzes the first step in the folic acid biosynthetic pathway 2 2 13.2% 6.44E-4 27769
[View Peptides]   YNL284C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 13 16 13.0% 7.13E-4 198997
[View Peptides]   CTM1 Cytochrome c lysine methyltransferase, trimethylates residue 72 of apo-cytochrome c (Cyc1p) in the c... 3 3 13.0% 4.01E-4 68285
[View Peptides]   IMD4 Inosine monophosphate dehydrogenase, catalyzes the first step of GMP biosynthesis, member of a four-... 4 5 13.0% 7.46E-4 56394
[View Peptides]   TFP1 Subunit A of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase; protein prec... 9 11 12.9% 8.03E-4 118637
[View Peptides]   HAL1 Cytoplasmic protein involved in halotolerance; decreases intracellular Na+ (via Ena1p) and increases... 2 2 12.6% 5.32E-4 32994
[View Peptides]   IDH2 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of... 3 3 12.5% 6.36E-4 39739
[View Peptides]   RRP14 Essential protein, constituent of 66S pre-ribosomal particles; interacts with proteins involved in r... 2 2 12.4% 3.6E-4 50482
[View Peptides]   RLI1 Essential iron-sulfur protein required for ribosome biogenesis and translation initiation; facilitat... 5 5 12.3% 6.43E-4 68340
[View Peptides]   CHC1 Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport ... 10 17 11.8% 8.04E-4 187233
[View Peptides]   GLT1 NAD(+)-dependent glutamate synthase (GOGAT), synthesizes glutamate from glutamine and alpha-ketoglut... 16 20 11.7% 7.29E-4 238100
[View Peptides]   URA2 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes t... 15 15 11.6% 5.3E-4 245123
[View Peptides]   CPS1 Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions 3 4 11.5% 5.43E-4 64597
[View Peptides]   RGC1 Pleckstrin homology domain containing protein proposed to function as a glycerol channel activator; ... 7 7 11.4% 5.06E-4 120395
[View Peptides]   YLR035C-A Retrotransposon TYA Gag and TYB Pol genes; polyprotein is processed to make a nucleocapsid-like prot... 7 9 11.3% 6.1E-4 131617
[View Peptides]   PDA1 E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, catalyzes the direct oxidative decarbo... 3 3 11.0% 5.59E-4 46343
[View Peptides]   KGD2 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase com... 4 5 10.8% 8.45E-4 50431
[View Peptides]   ARG1 Arginosuccinate synthetase, catalyzes the formation of L-argininosuccinate from citrulline and L-asp... 3 3 10.7% 5.59E-4 46940
[View Peptides]   TIP41 Protein that interacts physically and genetically with Tap42p, which regulates protein phosphatase 2... 2 2 10.7% 4.39E-4 41020
[View Peptides]   NPA3 Essential, conserved, cytoplasmic ATPase; phosphorylated by the Pcl1p-Pho85p kinase complex 3 3 10.6% 6.1E-4 43195
[View Peptides]   MBR1 Protein involved in mitochondrial functions and stress response; overexpression suppresses growth de... 2 2 10.6% 4.61E-4 36935
[View Peptides]   SAN1 Ubiquitin-protein ligase, involved in the proteasome-dependent degradation of aberrant nuclear prote... 4 4 10.5% 5.13E-4 65618
[View Peptides]   SED1 Major stress-induced structural GPI-cell wall glycoprotein in stationary-phase cells, associates wit... 2 3 10.4% 6.94E-4 34431
[View Peptides]   TPS1 Synthase subunit of trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storag... 3 3 10.1% 4.74E-4 56148
[View Peptides]   TRP3 Bifunctional enzyme exhibiting both indole-3-glycerol-phosphate synthase and anthranilate synthase a... 2 2 10.1% 3.23E-4 53489
[View Peptides]   SER3 3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis; isozy... 3 4 10.0% 6.67E-4 51193
[View Peptides]   PDC5 Minor isoform of pyruvate decarboxylase, key enzyme in alcoholic fermentation, decarboxylates pyruva... 3 4 9.9% 5.56E-4 61912
[View Peptides]   ATG4 Conserved cysteine protease required for autophagy; cleaves Atg8p to a form required for autophagoso... 3 3 9.9% 4.75E-4 55143
[View Peptides]   GLY1 Threonine aldolase, catalyzes the cleavage of L-allo-threonine and L-threonine to glycine; involved ... 3 3 9.8% 6.06E-4 42815
[View Peptides]   BAT2 Cytosolic branched-chain amino acid aminotransferase, homolog of murine ECA39; highly expressed duri... 2 2 9.8% 4.16E-4 41625
[View Peptides]   CTR86 Essential protein of unknown function; upstream region contains a Gcn4p responsive site suggesting a... 3 3 9.4% 4.17E-4 65206
[View Peptides]   IMD1 [DUBIOUS] Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located clo... 2 2 9.4% 3.88E-4 44386
[View Peptides]   ACS2 Acetyl-coA synthetase isoform which, along with Acs1p, is the nuclear source of acetyl-coA for histo... 3 3 8.9% 3.44E-4 75492
[View Peptides]   TUB1 Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form... 2 3 8.9% 5.25E-4 49800
[View Peptides]   YDR170W-A Retrotransposon TYA Gag gene; Gag is a nucleocapsid protein that is the structural constituent of vi... 3 6 8.9% 0.00107 49445
[View Peptides]   TRP2 Anthranilate synthase, catalyzes the initial step of tryptophan biosynthesis, forms multifunctional ... 2 2 8.7% 3.09E-4 56768
[View Peptides]   CYS4 Cystathionine beta-synthase, catalyzes synthesis of cystathionine from serine and homocysteine, the ... 2 2 8.7% 3.09E-4 56022
[View Peptides]   ADE4 Phosphoribosylpyrophosphate amidotransferase (PRPPAT; amidophosphoribosyltransferase), catalyzes fir... 3 3 8.6% 4.6E-4 56719
[View Peptides]   YNL284C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 3 3 8.4% 5.33E-4 49309
[View Peptides]   GPD1 NAD-dependent glycerol-3-phosphate dehydrogenase, key enzyme of glycerol synthesis, essential for gr... 2 4 8.2% 8.0E-4 42869
[View Peptides]   FIT1 Mannoprotein that is incorporated into the cell wall via a glycosylphosphatidylinositol (GPI) anchor... 2 2 8.1% 2.96E-4 52491
[View Peptides]   RPT5 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 2 2 8.1% 3.6E-4 48256
[View Peptides]   BAT1 Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39; highly expressed ... 2 2 8.1% 3.98E-4 43596
[View Peptides]   UTR1 ATP-NADH kinase; phosphorylates both NAD and NADH; active as a hexamer; enhances the activity of fer... 3 3 7.9% 4.43E-4 59469
[View Peptides]   ARO1 Pentafunctional arom protein, catalyzes steps 2 through 6 in the biosynthesis of chorismate, which i... 7 8 7.6% 3.94E-4 174754
[View Peptides]   YHR113W Cytoplasmic aspartyl aminopeptidase; cleaves unblocked N-terminal acidic amino acid residues from pe... 2 2 7.6% 3.19E-4 54174
[View Peptides]   ADH3 Mitochondrial alcohol dehydrogenase isozyme III; involved in the shuttling of mitochondrial NADH to ... 4 8 7.5% 0.00167 40370
[View Peptides]   RPN8 Essential, non-ATPase regulatory subunit of the 26S proteasome; has similarity to the human p40 prot... 2 2 7.4% 4.63E-4 38313
[View Peptides]   TKL1 Transketolase, similar to Tkl2p; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate... 2 2 7.1% 2.3E-4 73806
[View Peptides]   ILV1 Threonine deaminase, catalyzes the first step in isoleucine biosynthesis; expression is under genera... 2 2 6.9% 2.72E-4 63831
[View Peptides]   PDC6 Minor isoform of pyruvate decarboxylase, decarboxylates pyruvate to acetaldehyde, involved in amino ... 2 3 6.7% 4.17E-4 61581
[View Peptides]   PDB1 E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, which is an evolutionarily-conserved mu... 2 2 6.6% 4.27E-4 40054
[View Peptides]   DLD3 D-lactate dehydrogenase, part of the retrograde regulon which consists of genes whose expression is ... 2 2 6.5% 3.15E-4 55225
[View Peptides]   ARO8 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis 2 3 6.2% 4.69E-4 56178
[View Peptides]   CDC48 ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p a... 3 4 6.1% 3.75E-4 91996
[View Peptides]   RKM4 Ribosomal lysine methyltransferase specific for monomethylation of Rpl42ap and Rpl42bp (lysine 55); ... 2 2 6.1% 3.17E-4 57289
[View Peptides]   TCP1 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol; inv... 2 2 5.9% 2.8E-4 60481
[View Peptides]   RPB2 RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subun... 3 3 5.6% 1.92E-4 138751
[View Peptides]   ECM10 Heat shock protein of the Hsp70 family, localized in mitochondrial nucleoids, plays a role in protei... 4 5 5.6% 6.07E-4 70085
[View Peptides]   SYH1 Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 2 2 5.4% 1.84E-4 94356
[View Peptides]   NIP1 eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), involved in the assembly of ... 2 2 4.9% 1.93E-4 93204
[View Peptides]   KRS1 Lysyl-tRNA synthetase 2 2 4.9% 2.65E-4 67959
[View Peptides]   ACC1 Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to f... 5 5 4.7% 1.75E-4 250351
[View Peptides]   RPG1 eIF3a subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati... 3 4 4.4% 3.25E-4 110344
[View Peptides]   SSE2 Member of the heat shock protein 70 (HSP70) family; may be involved in protein folding; localized to... 5 8 4.3% 9.03E-4 77621
[View Peptides]   TUP1 General repressor of transcription, forms complex with Cyc8p, involved in the establishment of repre... 2 3 4.2% 3.29E-4 78308
[View Peptides]   SCH9 Protein kinase involved in transcriptional activation of osmostress-responsive genes; regulates G1 p... 2 2 4.1% 1.9E-4 91812
[View Peptides]   PTP2 Phosphotyrosine-specific protein phosphatase involved in the inactivation of mitogen-activated prote... 2 2 3.9% 2.09E-4 85868
[View Peptides]   VMA2 Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a... 2 2 3.9% 3.03E-4 57749
[View Peptides]   SCP160 Essential RNA-binding G protein effector of mating response pathway, mainly associated with nuclear ... 2 2 3.8% 1.28E-4 134809
[View Peptides]   TSL1 Large subunit of trehalose 6-phosphate synthase (Tps1p)/phosphatase (Tps2p) complex, which converts ... 2 2 3.8% 1.42E-4 123018
[View Peptides]   YCL019W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 4 5 3.6% 2.21E-4 202095
[View Peptides]   YLR410W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 4 5 3.6% 2.21E-4 202121
[View Peptides]   YFL002W-A, YGR161W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 4 5 3.6% 2.21E-4 202038
[View Peptides]   YFL002W-A, YGR161W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 4 5 3.6% 2.21E-4 202038
[View Peptides]   YDR210W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 4 5 3.6% 2.21E-4 202094
[View Peptides]   COP1 Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secr... 2 2 3.3% 1.3E-4 135607
[View Peptides]   TPS2 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the... 2 2 3.3% 1.75E-4 102976
[View Peptides]   ASK10 Component of the RNA polymerase II holoenzyme, phosphorylated in response to oxidative stress; has a... 2 2 2.9% 1.37E-4 126864
[View Peptides]   LTE1 Protein similar to GDP/GTP exchange factors but without detectable GEF activity; required for asymme... 2 2 2.8% 1.09E-4 163149
[View Peptides]   YBL100W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 4 2.6% 1.77E-4 202214
[View Peptides]   YOR343W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 4 2.6% 1.77E-4 202160
[View Peptides]   YDR034C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 4 2.6% 1.77E-4 201964
[View Peptides]   YDR261W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 4 2.5% 1.77E-4 201961
[View Peptides]   SEC31 Component of the Sec13p-Sec31p complex of the COPII vesicle coat, required for vesicle formation in ... 2 2 2.4% 1.23E-4 138703
[View Peptides]   YNR065C Protein of unknown function; protein-protein interactions suggest a possible role in actin patch for... 2 2 2.4% 1.4E-4 125200
[View Peptides]   GAS1 Beta-1,3-glucanosyltransferase, required for cell wall assembly and also has a role in transcription... 2 2 2.1% 2.8E-4 59582
[View Peptides]   YMR259C Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 2 2 2.0% 1.1E-4 163577
[View Peptides]   HEF3 Translational elongation factor EF-3; paralog of YEF3 and member of the ABC superfamily; stimulates ... 2 2 2.0% 1.5E-4 115869
[View Peptides]   VTH1 Putative membrane glycoprotein with strong similarity to Vth2p and Pep1p/Vps10p, may be involved in ... 2 2 1.7% 1.01E-4 174427
[View Peptides]   VTH2 Putative membrane glycoprotein with strong similarity to Vth1p and Pep1p/Vps10p, may be involved in ... 2 2 1.7% 1.01E-4 174401
[View Peptides]   PYC2 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly simi... 2 2 1.7% 1.33E-4 130167
[View Peptides]   PYC1 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly simi... 2 2 1.7% 1.33E-4 130099
[View Peptides]   YOR192C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 3 1.5% 1.33E-4 201983

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle