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Protein Overview: ATG4

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data ATG4 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..143] deduced N/A No confident structure predictions are available.
2 View Details [144..298] MSA 1.035968 View MSA. No confident structure predictions are available.
3 View Details [299..393] MSA 2.035971 View MSA. No confident structure predictions are available.
4 View Details [394..494] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • peptidase activity
  • 2.8192612691912 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 2.71117522993364 bayes_pls_golite062009
  • hydrolase activity
  • 2.66167923792227 bayes_pls_golite062009
  • endopeptidase activity
  • 2.56654871607946 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 2.55227247835105 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 2.13397229861051 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
  • 1.95802900199539 bayes_pls_golite062009
  • tubulin binding
  • 1.85112496470487 bayes_pls_golite062009
  • microtubule binding
  • 1.82320858139311 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 1.48823471197032 bayes_pls_golite062009
  • binding
  • 1.34325419334831 bayes_pls_golite062009
  • protein binding
  • 1.08139200376412 bayes_pls_golite062009
  • catalytic activity
  • 1.05972260874031 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 0.954652694395915 bayes_pls_golite062009
  • transporter activity
  • 0.69523261160023 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.467924587720185 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.439003000540428 bayes_pls_golite062009
  • structural molecule activity
  • 0.297752217869698 bayes_pls_golite062009
  • nucleic acid binding
  • 0.289910308044519 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.125654358663332 bayes_pls_golite062009
  • transferase activity
  • 0.0852393573521809 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.0241561776323942 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle