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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: RPA135
Protein Desc: RNA polymerase I second largest subunit A135
Sequence Coverage: 51.1%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSKVIKPPGQ ARTADFRTLE RESRFINPPK DKSAFPLLQE AVQPHIGSFN ALTEGPDGGL  60
   61  LNLGVKDIGE KVIFDGKPLN SEDEISNSGY LGNKLSVSVE QVSIAKPMSN DGVSSAVERK 120
  121  VYPSESRQRL TSYRGKLLLK LKWSVNNGEE NLFEVRDCGG LPVMLQSNRC HLNKMSPYEL 180
  181  VQHKEESDEI GGYFIVNGIE KLIRMLIVQR RNHPMAIIRP SFANRGASYS HYGIQIRSVR 240
  241  PDQTSQTNVL HYLNDGQVTF RFSWRKNEYL VPVVMILKAL CHTSDREIFD GIIGNDVKDS 300
  301  FLTDRLELLL RGFKKRYPHL QNRTQVLQYL GDKFRVVFQA SPDQSDLEVG QEVLDRIVLV 360
  361  HLGKDGSQDK FRMLLFMIRK LYSLVAGECS PDNPDATQHQ EVLLGGFLYG MILKEKIDEY 420
  421  LQNIIAQVRM DINRGMAINF KDKRYMSRVL MRVNENIGSK MQYFLSTGNL VSQSGLDLQQ 480
  481  VSGYTVVAEK INFYRFISHF RMVHRGSFFA QLKTTTVRKL LPESWGFLCP VHTPDGSPCG 540
  541  LLNHFAHKCR ISTQQSDVSR IPSILYSLGV APASHTFAAG PSLCCVQIDG KIIGWVSHEQ 600
  601  GKIIADTLRY WKVEGKTPGL PIDLEIGYVP PSTRGQYPGL YLFGGHSRML RPVRYLPLDK 660
  661  EDIVGPFEQV YMNIAVTPQE IQNNVHTHVE FTPTNILSIL ANLTPFSDFN QSPRNMYQCQ 720
  721  MGKQTMGTPG VALCHRSDNK LYRLQTGQTP IVKANLYDDY GMDNFPNGFN AVVAVISYTG 780
  781  YDMDDAMIIN KSADERGFGY GTMYKTEKVD LALNRNRGDP ITQHFGFGND EWPKEWLEKL 840
  841  DEDGLPYIGT YVEEGDPICA YFDDTLNKTK IKTYHSSEPA YIEEVNLIGD ESNKFQELQT 900
  901  VSIKYRIRRT PQIGDKFSSR HGQKGVCSRK WPTIDMPFSE TGIQPDIIIN PHAFPSRMTI 960
  961  GMFVESLAGK AGALHGIAQD STPWIFNEDD TPADYFGEQL AKAGYNYHGN EPMYSGATGE1020
 1021  ELRADIYVGV VYYQRLRHMV NDKFQVRSTG PVNSLTMQPV KGRKRHGGIR VGEMERDALI1080
 1081  GHGTSFLLQD RLLNSSDYTQ ASVCRECGSI LTTQQSVPRI GSISTVCCRR CSMRFEDAKK1140
 1141  LLTKSEDGEK IFIDDSQIWE DGQGNKFVGG NETTTVAIPF VLKYLDSELS AMGIRLRYNV1200
 1201  EPK

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 7.321 0.5078 3492.56 8.1 1 43.9 3 K.SAFPLLQEAVQPHIGSFNALTEGPDGGLLNLGVK.D
[No Spectrum] 5.008 0.457 2496.81 7.6 1 56.8 1 K.VIFDGKPLNSEDEISNSGYLGNK.L
[No Spectrum] 3.366 0.4494 2590.17 7.3 2 41.7 1 K.LSVSVEQVSIAKPMSNDGVSSAVER.K
[No Spectrum] 3.559 0.3824 2593.21 7.7 1 44.8 1 K.LSVSVEQVSIAKPMSNDGVSSAVER.K
[No Spectrum] 4.122 0.4593 1693.35 8.2 1 88.5 1 K.WSVNNGEENLFEVR.D
[No Spectrum] 4.083 0.3713 1447.61 7.1 1 83.3 1 R.DCGGLPVMLQSNR.C
[No Spectrum] 5.75 0.3386 3112.45 8.3 1 49.0 3 K.MSPYELVQHKEESDEIGGYFIVNGIEK.L
[No Spectrum] 2.23 0.287 1351.75 6.9 1 63.6 1 R.GASYSHYGIQIR.S
[No Spectrum] 3.386 0.3751 1352.73 6.7 1 77.3 5 R.GASYSHYGIQIR.S
[No Spectrum] 4.611 0.411 2776.4 7.3 1 52.2 1 R.SVRPDQTSQTNVLHYLNDGQVTFR.F
[No Spectrum] 5.016 0.3986 2777.84 8.0 1 48.9 3 R.SVRPDQTSQTNVLHYLNDGQVTFR.F
[No Spectrum] 4.817 0.3324 1546.51 7.3 1 87.5 3 R.KNEYLVPVVMILK.A
[No Spectrum] 3.266 0.3956 2261.17 7.3 1 47.4 1 K.ALCHTSDREIFDGIIGNDVK.D
[No Spectrum] 2.597 0.2807 1164.57 7.8 9 72.2 1 R.TQVLQYLGDK.F
[No Spectrum] 3.356 0.356 1468.94 7.3 1 72.7 1 R.TQVLQYLGDKFR.V
[No Spectrum] 5.216 0.4829 2332.75 7.6 1 67.5 1 R.VVFQASPDQSDLEVGQEVLDR.I
[No Spectrum] 3.551 0.1388 3485.27 7.9 15 33.9 1 D.LQQVSGYTVVAEKINFYRFISHFRMVHRG.S
[No Spectrum] 6.682 0.5832 3232.2 8.2 1 45.0 3 R.IPSILYSLGVAPASHTFAAGPSLCCVQIDGK.I
[No Spectrum] 2.603 0.2861 1253.73 7.1 51 60.0 1 K.IIGWVSHEQGK.I
[No Spectrum] 4.736 0.4942 2036.4 7.8 1 76.5 1 K.IIGWVSHEQGKIIADTLR.Y
[No Spectrum] 4.72 0.5843 1925.89 6.8 1 73.5 5 K.TPGLPIDLEIGYVPPSTR.G
[No Spectrum] 3.759 0.4897 1552.4 7.0 1 76.9 4 R.GQYPGLYLFGGHSR.M
[No Spectrum] 3.086 0.3179 1428.86 6.2 1 58.3 1 K.QTMGTPGVALCHR.S
[No Spectrum] 4.076 0.4001 2346.41 7.4 1 46.1 1 R.NRGDPITQHFGFGNDEWPKE.W
[No Spectrum] 3.636 0.323 2497.89 7.0 1 34.5 1 K.TYHSSEPAYIEEVNLIGDESNK.F
[No Spectrum] 5.95 0.4105 3670.04 7.6 1 44.4 5 K.TYHSSEPAYIEEVNLIGDESNKFQELQTVSIK.Y
[No Spectrum] 3.435 0.4426 1393.15 6.7 1 81.8 1 R.RTPQIGDKFSSR.H
[No Spectrum] 3.709 0.3708 1393.83 6.3 1 56.8 1 R.RTPQIGDKFSSR.H
[No Spectrum] 3.116 0.346 1236.73 6.3 1 90.0 1 R.TPQIGDKFSSR.H
[No Spectrum] 6.478 0.5306 3207.86 8.0 1 48.1 2 R.KWPTIDMPFSETGIQPDIIINPHAFPSR.M
[No Spectrum] 4.37 0.4558 1384.52 6.7 1 87.5 2 R.MTIGMFVESLAGK.A
[No Spectrum] 5.983 0.4212 3479.63 8.2 1 41.1 2 K.AGALHGIAQDSTPWIFNEDDTPADYFGEQLAK.A
[No Spectrum] 4.976 0.383 2359.53 8.0 1 63.2 2 T.PWIFNEDDTPADYFGEQLAK.A
[No Spectrum] 3.513 0.3111 1459.98 7.4 1 80.8 1 R.STGPVNSLTMQPVK.G
[No Spectrum] 3.202 0.3881 1673.62 7.6 1 76.7 1 R.STGPVNSLTMQPVKGR.K
[No Spectrum] 3.525 0.3928 1800.28 7.7 1 68.8 1 R.STGPVNSLTMQPVKGRK.R
[No Spectrum] 4.111 0.3999 2345.12 7.9 1 60.0 1 R.VGEMERDALIGHGTSFLLQDR.L
[No Spectrum] 5.457 0.5162 2345.55 7.9 1 50.0 3 R.VGEMERDALIGHGTSFLLQDR.L
[No Spectrum] 4.058 0.4456 1615.07 8.5 2 84.6 2 R.LLNSSDYTQASVCR.E
[No Spectrum] 5.606 0.5605 3171.99 7.8 1 37.0 4 R.LLNSSDYTQASVCRECGSILTTQQSVPR.I
[No Spectrum] 3.842 0.4366 1576.74 7.4 1 80.8 1 R.ECGSILTTQQSVPR.I
[No Spectrum] 5.709 0.3206 2511.25 7.7 1 47.6 1 K.SEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 4.959 0.3673 2512.5 7.8 1 54.8 4 K.SEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 4.453 0.405 1865.83 7.8 1 76.7 2 K.IFIDDSQIWEDGQGNK.F
[No Spectrum] 4.695 0.4233 1793.78 6.8 1 71.9 6 K.FVGGNETTTVAIPFVLK.Y
[No Spectrum] 4.415 0.3257 1356.08 7.0 1 86.4 1 K.YLDSELSAMGIR.L
[No Spectrum] 2.363 0.2073 1356.72 6.4 309 40.9 1 K.YLDSELSAMGIR.L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle