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Protein Overview: GBP2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen GBP2 MOB2 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data GBP2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..112] PSI-BLAST 107.0 Poly(A)-binding protein
2 View Details [113..210] PSI-BLAST 107.0 Poly(A)-binding protein
3 View Details [211..329] PSI-BLAST 116.045757 Hu antigen D (Hud)
4 View Details [330..427] PSI-BLAST 16.39794 Neural RNA-binding protein Musashi-1

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 6.73097473547076 bayes_pls_golite062009
  • mRNA binding
  • 5.29759606920196 bayes_pls_golite062009
  • nucleic acid binding
  • 4.92126426323641 bayes_pls_golite062009
  • 4.08350076268185 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.93798024346416 bayes_pls_golite062009
  • structural molecule activity
  • 2.78501986457503 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 2.47215943693079 bayes_pls_golite062009
  • telomeric DNA binding
  • 2.04976561275235 bayes_pls_golite062009
  • transcription regulator activity
  • 1.92450390013691 bayes_pls_golite062009
  • DNA binding
  • 1.8021593476478 bayes_pls_golite062009
  • transcription factor activity
  • 1.15127506309683 bayes_pls_golite062009
  • snRNA binding
  • 1.12690941758278 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.824614388276642 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.43716526938634 bayes_pls_golite062009
  • transporter activity
  • 0.417047632648771 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.383589644462932 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.288804044686487 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.2202184446161 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00171911393626201 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • RNA binding
  • 6.73097473547076 bayes_pls_golite062009
  • mRNA binding
  • 5.29759606920196 bayes_pls_golite062009
  • nucleic acid binding
  • 4.92126426323641 bayes_pls_golite062009
  • 4.08350076268185 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.93798024346416 bayes_pls_golite062009
  • structural molecule activity
  • 2.78501986457503 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 2.47215943693079 bayes_pls_golite062009
  • telomeric DNA binding
  • 2.04976561275235 bayes_pls_golite062009
  • transcription regulator activity
  • 1.92450390013691 bayes_pls_golite062009
  • DNA binding
  • 1.8021593476478 bayes_pls_golite062009
  • transcription factor activity
  • 1.15127506309683 bayes_pls_golite062009
  • snRNA binding
  • 1.12690941758278 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.824614388276642 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.43716526938634 bayes_pls_golite062009
  • transporter activity
  • 0.417047632648771 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.383589644462932 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.288804044686487 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.2202184446161 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00171911393626201 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle