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Bait Protein: BOI1
Organism: Saccharomyces cerevisiae
Publication: McCusker D, Denison C, Anderson S, Egelhofer TA, Yates JR 3rd, Gygi SP, Kellogg DR. Cdk1 coordinates cell-surface growth with the cell cycle.Nat Cell Biol. 2007 May;9(5):506-15.
Comments: Sample bob1 (2nd set) from october 2005

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  Hit Protein Protein Desc Sequence Count Spectrum Count Sequence Coverage NSAF Mol. Wt.
[View Peptides]   HSP26_YEAST, HS2... (P15992) Heat shock protein 26 (26 kDa heat shock protein), (P15992) Heat shock protein 26 (26 kDa h... 15 49 66.7% 0.0199 23748
[View Peptides]   HS71_YEAST, HSP7... (P10591) Heat shock protein SSA1 (Heat shock protein YG100), (P10591) Heat shock protein SSA1 (Heat ... 56 165 64.0% 0.0223 69526
[View Peptides]   HSP76_YEAST, HS7... (P40150) Heat shock protein SSB2, (P40150) Heat shock protein SSB2 50 180 63.2% 0.0255 66463
[View Peptides]   RGA2 GTPase-activating protein for the polarity-establishment protein Cdc42p; implicated in control of se... 95 255 63.1% 0.0219 113291
[View Peptides]   HS75_YEAST, HSP7... (P11484) Heat shock protein SSB1 (Cold-inducible protein YG101), (P11484) Heat shock protein SSB1 (C... 51 181 61.9% 0.0256 66470
[View Peptides]   STM1 Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with r... 21 37 61.5% 0.0117 29995
[View Peptides]   RS19B_YEAST, R19... (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55), (P07281) 40S ribosomal protein S19-B (S16... 11 48 60.1% 0.0291 15760
[View Peptides]   R19A_YEAST, RS19... (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45), (P07280) 40S ribosomal protein S19... 11 48 60.1% 0.0291 15786
[View Peptides]   IMD3 Inosine monophosphate dehydrogenase, catalyzes the first step of GMP biosynthesis, member of a four-... 30 124 55.6% 0.0205 56585
[View Peptides]   HSP72_YEAST, HS7... (P10592) Heat shock protein SSA2, (P10592) Heat shock protein SSA2 40 132 54.4% 0.0179 69339
[View Peptides]   ASC1 G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p; ortholog of RACK1 th... 15 34 50.5% 0.00924 34805
[View Peptides]   gi|49258827 gi|49258827|pdb|1S1H|H Chain H, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 8 21 48.8% 0.0141 14495
[View Peptides]   RIM1 Single-stranded DNA-binding protein essential for mitochondrial genome maintenance; involved in mito... 8 17 47.4% 0.0109 15386
[View Peptides]   gi|49258862 gi|49258862|pdb|1S1I|W Chain W, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 7 15 47.3% 0.0116 12822
[View Peptides]   HSP7F_YEAST, HS7... (P32589) Heat shock protein homolog SSE1 (Chaperone protein MSI3), (P32589) Heat shock protein homol... 26 68 45.4% 0.00851 77235
[View Peptides]   IMD4 Inosine monophosphate dehydrogenase, catalyzes the first step of GMP biosynthesis, member of a four-... 21 91 45.0% 0.015 56394
[View Peptides]   RS0A_YEAST (P32905) 40S ribosomal protein S0-A (Nucleic acid-binding protein NAB1A) 13 33 45.0% 0.0114 27893
[View Peptides]   RS0B_YEAST (P46654) 40S ribosomal protein S0-B (Nucleic acid-binding protein NAB1B) 13 33 45.0% 0.0114 27831
[View Peptides]   RL25_YEAST (P04456) 60S ribosomal protein L25 (YL25) (RP61L) 5 5 44.0% 0.00307 15626
[View Peptides]   chrIX_R_231552-2... (P26782) 40S ribosomal protein S24 (RP50), null 8 12 43.3% 0.00776 15198
[View Peptides]   SBP1 Putative RNA binding protein; involved in translational repression and found in cytoplasmic P bodies... 11 26 43.2% 0.00766 32990
[View Peptides]   gi|49258828 gi|49258828|pdb|1S1H|I Chain I, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 5 12 43.0% 0.00732 15716
[View Peptides]   RPP2A Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction... 4 10 42.5% 0.00817 10746
[View Peptides]   RS7A_YEAST (P26786) 40S ribosomal protein S7-A (RP30) 10 27 42.3% 0.0124 21491
[View Peptides]   SUI3 Beta subunit of the translation initiation factor eIF2, involved in the identification of the start ... 12 19 42.1% 0.00578 31574
[View Peptides]   PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear (Poly(A)-binding protein) (PABP) (AR... 17 39 42.0% 0.00587 64213
[View Peptides]   RPP2B Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction ... 5 9 41.8% 0.00709 11050
[View Peptides]   R22A_YEAST, RL22... (P05749) 60S ribosomal protein L22-A (YL31) (RP4), (P05749) 60S ribosomal protein L22-A (YL31) (RP4) 3 13 41.7% 0.00939 13562
[View Peptides]   R141_YEAST, RS14... (P06367) 40S ribosomal protein S14-A (RP59A), (P06367) 40S ribosomal protein S14-A (RP59A) 4 4 40.4% 0.00255 14405
[View Peptides]   RS14B_YEAST, R14... (P39516) 40S ribosomal protein S14-B (RP59B), (P39516) 40S ribosomal protein S14-B (RP59B) 4 4 40.1% 0.00253 14519
[View Peptides]   gi|6730174, gi|6... gi|6730177|pdb|1CK8|B Chain B, Rpl30-Mrna Complex From Yeast, gi|6730174|pdb|1CK5|B Chain B, Ribosom... 4 9 39.4% 0.0075 11284
[View Peptides]   RS2_YEAST (P25443) 40S ribosomal protein S2 (S4) (YS5) (RP12) (Omnipotent suppressor protein SUP44) 6 12 38.3% 0.00411 27319
[View Peptides]   SSC1 Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitoc... 21 52 37.2% 0.00689 70628
[View Peptides]   KGD1 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step... 31 58 37.0% 0.00496 114416
[View Peptides]   IMD2 Inosine monophosphate dehydrogenase, catalyzes the rate-limiting step in GTP biosynthesis, expressio... 19 62 36.3% 0.0103 56530
[View Peptides]   KGD2 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase com... 17 41 35.9% 0.00767 50431
[View Peptides]   MRPL1 Mitochondrial ribosomal protein of the large subunit 6 7 35.4% 0.00213 30996
[View Peptides]   FAS2 Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty ... 45 64 35.2% 0.00294 206945
[View Peptides]   RS13_YEAST (P05756) 40S ribosomal protein S13 (S27A) (YS15) 5 12 34.7% 0.00693 16898
[View Peptides]   RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (YL5) (RP6) 8 12 34.1% 0.00408 27981
[View Peptides]   gi|49258859 gi|49258859|pdb|1S1I|U Chain U, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 5 7 34.1% 0.00481 14103
[View Peptides]   RL26B_YEAST, R26... (P53221) 60S ribosomal protein L26-B (YL33), (P53221) 60S ribosomal protein L26-B (YL33) 5 7 34.1% 0.00481 14103
[View Peptides]   RS3_YEAST (P05750) 40S ribosomal protein S3 (YS3) (RP13) 8 11 33.9% 0.00399 26372
[View Peptides]   RPP1B Ribosomal protein P1 beta, component of the ribosomal stalk, which is involved in interaction of tra... 2 4 33.0% 0.00327 10668
[View Peptides]   RL4A_YEAST (P10664) 60S ribosomal protein L4-A (L2A) (RP2) 16 33 31.9% 0.00792 38961
[View Peptides]   gi|49258842 gi|49258842|pdb|1S1I|D Chain D, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 14 31 31.9% 0.00744 38931
[View Peptides]   YMR31 Mitochondrial ribosomal protein of the small subunit, has similarity to human mitochondrial ribosoma... 3 5 31.7% 0.00352 13689
[View Peptides]   YAR075W [DUBIOUS] Non-functional protein with homology IMP dehydrogenase; YAR073W/IMD1 and YAR075W comprise ... 9 18 31.2% 0.00993 17003
[View Peptides]   DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, required for translation initiation of all ye... 17 61 31.1% 0.00875 65553
[View Peptides]   HSP60 Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides... 13 27 30.8% 0.00409 60752
[View Peptides]   RSM27 Mitochondrial ribosomal protein of the small subunit 2 3 30.0% 0.00236 12393
[View Peptides]   RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (YL5) (RP6) (Maintenance of killer protein 7) 7 11 29.8% 0.00374 27994
[View Peptides]   RSM19 Mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S19 ribosomal protei... 2 2 29.7% 0.0019 10275
[View Peptides]   HS74_YEAST, HSP7... (P22202) Heat shock protein SSA4, (P22202) Heat shock protein SSA4 17 34 29.6% 0.0046 69520
[View Peptides]   RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L) 6 7 29.3% 0.00323 21573
[View Peptides]   TIF34 eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for ... 5 7 29.1% 0.00175 38755
[View Peptides]   SPT5 Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a compl... 29 61 29.0% 0.00497 115650
[View Peptides]   RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B) 5 9 28.3% 0.00307 28681
[View Peptides]   RS8_YEAST (P05754) 40S ribosomal protein S8 (S14) (YS9) (RP19) 5 9 28.1% 0.00392 22358
[View Peptides]   DPM1 Dolichol phosphate mannose (Dol-P-Man) synthase of the ER membrane, catalyzes the formation of Dol-P... 4 6 27.7% 0.00195 30362
[View Peptides]   MLC1 Essential light chain for Myo1p, light chain for Myo2p; stabilizes Myo2p by binding to the neck regi... 2 5 27.5% 0.00291 16444
[View Peptides]   RFA3 Subunit of heterotrimeric Replication Protein A (RPA), which is a highly conserved single-stranded D... 2 2 27.0% 0.00142 13816
[View Peptides]   gi|49258840 gi|49258840|pdb|1S1I|B Chain B, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 7 10 26.5% 0.00342 27277
[View Peptides]   SRO9 Cytoplasmic RNA-binding protein that associates with translating ribosomes; involved in heme regulat... 9 19 26.4% 0.00353 51789
[View Peptides]   CLC1 Clathrin light chain, subunit of the major coat protein involved in intracellular protein transport ... 5 7 26.2% 0.0026 26532
[View Peptides]   FAS1 Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty a... 37 66 25.9% 0.00279 228689
[View Peptides]   RS5_YEAST (P26783) 40S ribosomal protein S5 (S2) (YS8) (RP14) 6 39 25.9% 0.0151 24907
[View Peptides]   NDI1 NADH:ubiquinone oxidoreductase, transfers electrons from NADH to ubiquinone in the respiratory chain... 9 20 25.3% 0.00338 57250
[View Peptides]   LPD1 Dihydrolipoamide dehydrogenase, the lipoamide dehydrogenase component (E3) of the pyruvate dehydroge... 8 12 25.3% 0.00208 54010
[View Peptides]   R15B_YEAST, RL15... (P54780) 60S ribosomal protein L15-B (YL10) (L13) (RP15R) (YP18), (P54780) 60S ribosomal protein L15... 4 4 25.1% 0.00171 24291
[View Peptides]   gi|49258850 gi|49258850|pdb|1S1I|L Chain L, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 4 4 25.1% 0.00171 24291
[View Peptides]   gi|49258860 gi|49258860|pdb|1S1I|V Chain V, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 4 4 24.3% 0.00234 16591
[View Peptides]   MRPL19 Mitochondrial ribosomal protein of the large subunit 2 2 24.1% 0.0011 16670
[View Peptides]   gi|49258848 gi|49258848|pdb|1S1I|J Chain J, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 4 4 23.7% 0.002 19588
[View Peptides]   CLU1 eIF3 component of unknown function; deletion causes defects in mitochondrial organization but not in... 20 49 23.6% 0.00332 145165
[View Peptides]   RL6A_YEAST (Q02326) 60S ribosomal protein L6-A (L17) (YL16) (RP18) 4 13 23.4% 0.00644 19830
[View Peptides]   KAR2 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i... 14 22 23.3% 0.0028 74468
[View Peptides]   MGS1 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome; ... 10 16 23.3% 0.00236 66544
[View Peptides]   gi|408368, gi|585214 sp|P37292|GLYM_YEAST Serine hydroxymethyltransferase, mitochondrial precursor (Serine methylase) (Gl... 11 25 23.3% 0.00442 53660
[View Peptides]   CHC1 Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport ... 25 53 23.2% 0.00278 187233
[View Peptides]   RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A) 4 8 23.2% 0.00273 28612
[View Peptides]   RS11_YEAST (P26781) 40S ribosomal protein S11 (S18) (YS12) (RP41) 4 4 23.2% 0.00224 17618
[View Peptides]   RL36A_YEAST, R36... (P05745) 60S ribosomal protein L36-A (L39A) (YL39), (P05745) 60S ribosomal protein L36-A (L39A) (YL3... 2 2 23.2% 0.00175 10993
[View Peptides]   RL36B_YEAST, R36... (O14455) 60S ribosomal protein L36-B (L39B) (YL39), (O14455) 60S ribosomal protein L36-B (L39B) (YL3... 2 2 23.2% 0.00175 11004
[View Peptides]   GCD11 Gamma subunit of the translation initiation factor eIF2, involved in the identification of the start... 9 10 23.0% 0.00164 57866
[View Peptides]   RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11) 5 9 23.0% 0.00321 27507
[View Peptides]   RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B) 5 9 23.0% 0.00321 27565
[View Peptides]   MRPS8 Mitochondrial ribosomal protein of the small subunit 2 2 22.6% 0.00112 17471
[View Peptides]   CMD1 Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, act... 2 5 22.4% 0.00295 16135
[View Peptides]   gi|417718 gi|417718|sp|P05759.2|RS37_YEAST RecName: Full=40S ribosomal protein S31; AltName: Full=S37; AltName... 3 3 22.4% 0.00342 8677
[View Peptides]   RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP21) (YP28) 5 6 22.2% 0.00268 22167
[View Peptides]   RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP21) (YP28) 5 6 21.9% 0.00265 22312
[View Peptides]   RLP7 Nucleolar protein with similarity to large ribosomal subunit L7 proteins; constituent of 66S pre-rib... 4 4 21.7% 0.00108 36559
[View Peptides]   NPL3 RNA-binding protein that promotes elongation, regulates termination, and carries poly(A) mRNA from n... 6 21 21.5% 0.0044 45407
[View Peptides]   R172_YEAST, RL17... (P46990) 60S ribosomal protein L17-B (YL17-B), (P46990) 60S ribosomal protein L17-B (YL17-B) 3 5 21.3% 0.00237 20420
[View Peptides]   gi|49258852 gi|49258852|pdb|1S1I|N Chain N, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 3 5 21.3% 0.00237 20418
[View Peptides]   gi|49258866 gi|49258866|pdb|1S1I|9 Chain 9, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 2 4 20.9% 0.00381 9960
[View Peptides]   gi|49258841 gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 5 13 20.7% 0.00292 43626
[View Peptides]   HSP79_YEAST, HS7... (P32590) Heat shock protein homolog SSE2, (P32590) Heat shock protein homolog SSE2 11 17 20.5% 0.00213 77490
[View Peptides]   FUN12 GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes a... 16 26 20.4% 0.00225 112268
[View Peptides]   RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5) 6 14 20.4% 0.00467 29279
[View Peptides]   G3P3_YEAST (P00359) Glyceraldehyde-3-phosphate dehydrogenase 3 (EC 1.2.1.12) (GAPDH 3) 4 4 19.9% 0.00105 35615
[View Peptides]   IMD1 [DUBIOUS] Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located clo... 8 38 19.4% 0.00817 44386
[View Peptides]   MRPL13 Mitochondrial ribosomal protein of the large subunit, not essential for mitochondrial translation 3 3 19.3% 9.45E-4 31526
[View Peptides]   SNU13 RNA binding protein, part of U3 snoRNP involved in rRNA processing, part of U4/U6-U5 tri-snRNP invol... 2 3 19.0% 0.00206 13569
[View Peptides]   NOP56 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that ... 6 9 18.8% 0.00155 56864
[View Peptides]   chrXV_R_678190-6... (Q12087) 40S ribosomal protein S30, null, null 2 3 17.7% 0.00419 6987
[View Peptides]   YGR054W Eukaryotic initiation factor (eIF) 2A; associates specifically with both 40S subunits and 80 S ribos... 7 9 17.6% 0.00121 71305
[View Peptides]   MET8 Bifunctional dehydrogenase and ferrochelatase, involved in the biosynthesis of siroheme, a prostheti... 3 5 17.5% 0.00158 31918
[View Peptides]   SUI2 Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start... 4 11 17.4% 0.00314 34718
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 5 7 17.2% 0.00132 50033
[View Peptides]   PEP4 Vacuolar aspartyl protease (proteinase A), required for the posttranslational precursor maturation o... 6 8 17.0% 0.00171 44499
[View Peptides]   gi|22022642, gi|... gi|4371|emb|CAA30029.1| unnamed protein product [Saccharomyces cerevisiae], gi|22022642|emb|CAA31703... 4 7 17.0% 0.00194 33766
[View Peptides]   TIF5 Translation initiation factor eIF-5; N-terminal domain functions as a GTPase-activating protein to m... 4 4 16.8% 8.56E-4 45261
[View Peptides]   RL6B_YEAST (P05739) 60S ribosomal protein L6-B (L17) (YL16) (RP18) 3 11 16.6% 0.00545 19855
[View Peptides]   gi|464861, gi|45... gi|464861|sp|P33298.1|PRS6B_YEAST RecName: Full=26S protease regulatory subunit 6B homolog; AltName:... 4 6 16.1% 0.00121 47970
[View Peptides]   DBP3 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis 5 6 15.9% 9.94E-4 58827
[View Peptides]   RFA1 Subunit of heterotrimeric Replication Protein A (RPA), which is a highly conserved single-stranded D... 8 8 15.8% 0.00112 70348
[View Peptides]   RTN1 ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subu... 2 2 15.6% 5.87E-4 32916
[View Peptides]   MDJ1 Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p; involved in protein fol... 4 5 15.5% 8.48E-4 55561
[View Peptides]   BMH1_YEAST (P29311) Protein BMH1 2 2 14.7% 6.51E-4 29960
[View Peptides]   YDJ1 Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein trans... 4 8 14.4% 0.00169 44671
[View Peptides]   SGN1 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM); may have a role in mRNA tr... 2 3 14.4% 0.00104 28954
[View Peptides]   BMH2_YEAST (P34730) Protein BMH2 2 2 14.3% 6.37E-4 30930
[View Peptides]   MRP13 Mitochondrial ribosomal protein of the small subunit 3 3 13.9% 7.67E-4 38988
[View Peptides]   gi|133003, gi|17... gi|173235|gb|AAA35236.1| 5S ribosomal RNA binding-protein [Saccharomyces cerevisiae], gi|173232|gb|A... 2 8 13.8% 0.00233 33743
[View Peptides]   VMA2 Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a... 4 4 13.7% 6.7E-4 57749
[View Peptides]   HEM15 Ferrochelatase, a mitochondrial inner membrane protein, catalyzes the insertion of ferrous iron into... 3 4 13.5% 8.82E-4 44596
[View Peptides]   HMO1 Chromatin associated high mobility group (HMG) family member involved in genome maintenance; rDNA-bi... 2 2 13.4% 7.04E-4 27544
[View Peptides]   G3P2_YEAST (P00358) Glyceraldehyde-3-phosphate dehydrogenase 2 (EC 1.2.1.12) (GAPDH 2) 3 3 13.0% 7.85E-4 35716
[View Peptides]   YRA1 RNA binding protein required for export of poly(A)+ mRNA from the nucleus; proposed to couple mRNA e... 3 3 12.8% 0.00115 24956
[View Peptides]   PBP4 Pbp1p binding protein, interacts strongly with Pab1p-binding protein 1 (Pbp1p) in the yeast two-hybr... 2 2 12.4% 9.37E-4 19881
[View Peptides]   RLI1 Essential iron-sulfur protein required for ribosome biogenesis and translation initiation; facilitat... 5 6 12.3% 8.55E-4 68340
[View Peptides]   NOP58 Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the ... 4 6 12.3% 0.00102 56956
[View Peptides]   RL16B_YEAST, R16... (P26785) 60S ribosomal protein L16-B (YL15) (RP23), (P26785) 60S ribosomal protein L16-B (YL15) (RP2... 2 2 12.2% 8.8E-4 22118
[View Peptides]   FOX2 Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway; has 3-hydroxyacyl-CoA d... 7 9 12.1% 8.66E-4 98703
[View Peptides]   BCH1 Member of the ChAPs family (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms th... 6 13 12.0% 0.00156 82049
[View Peptides]   MIS1 Mitochondrial C1-tetrahydrofolate synthase, involved in interconversion between different oxidation ... 10 10 11.9% 8.89E-4 106217
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 11.6% 3.94E-4 48993
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 11.6% 3.94E-4 48953
[View Peptides]   YJR028W Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 11.6% 3.94E-4 49112
[View Peptides]   YGR027W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 11.6% 3.94E-4 49056
[View Peptides]   YDR261C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YDRCTY1-3 TYB is mutant and probably no... 2 2 11.6% 3.94E-4 49009
[View Peptides]   YBR012W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 11.6% 3.94E-4 49068
[View Peptides]   YDR098C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 11.6% 3.94E-4 49057
[View Peptides]   YML045W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 11.6% 3.94E-4 49122
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 11.6% 3.94E-4 49129
[View Peptides]   DR48_YEAST, DDR4... (P18899) DDR48 stress protein (DNA damage-responsive protein 48) (DDRP 48) (YP 75) (Flocculent speci... 2 3 11.2% 6.06E-4 46102
[View Peptides]   MNP1 Protein associated with the mitochondrial nucleoid; putative mitochondrial ribosomal protein with si... 2 6 10.8% 0.00268 20650
[View Peptides]   RPC40 RNA polymerase subunit AC40, common to RNA polymerase I and III 2 3 10.4% 7.76E-4 37687
[View Peptides]   PRT1 eIF3b subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati... 5 7 10.1% 7.95E-4 88130
[View Peptides]   ECM10 Heat shock protein of the Hsp70 family, localized in mitochondrial nucleoids, plays a role in protei... 4 13 9.2% 0.00175 70085
[View Peptides]   AVT7 Putative transporter, member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular ... 2 2 9.2% 3.54E-4 53737
[View Peptides]   RPA49 RNA polymerase I subunit A49 2 4 9.2% 8.35E-4 46651
[View Peptides]   ERV46 Protein localized to COPII-coated vesicles, forms a complex with Erv41p; involved in the membrane fu... 2 2 9.2% 4.18E-4 46235
[View Peptides]   MED6 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 2 2 9.2% 5.87E-4 32819
[View Peptides]   CBF5 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (s... 3 5 9.1% 8.97E-4 54705
[View Peptides]   gi|1170569 sp|P11986|INO1_YEAST Inositol-3-phosphate synthase (Myo-inositol-1-phosphate synthase) (MI-1-P synth... 2 2 8.8% 3.23E-4 60070
[View Peptides]   G3P1_YEAST (P00360) Glyceraldehyde-3-phosphate dehydrogenase 1 (EC 1.2.1.12) (GAPDH 1) 2 2 8.8% 5.24E-4 35619
[View Peptides]   TUP1 General repressor of transcription, forms complex with Cyc8p, involved in the establishment of repre... 4 5 8.3% 6.08E-4 78308
[View Peptides]   ENO2_YEAST (P00925) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lya... 2 3 8.3% 5.96E-4 46783
[View Peptides]   YJR023C [DUBIOUS] Putative protein of unknown function; open reading frame overlaps LSM8/YJR022W encoding an... 2 38 8.3% 0.0248 15282
[View Peptides]   RPG1 eIF3a subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati... 6 6 8.2% 5.39E-4 110344
[View Peptides]   gi|171350, gi|17... gi|172726|gb|AAA35103.1| SSN6 protein [Saccharomyces cerevisiae], gi|171350|gb|AAA34545.1| CYC8 prot... 3 4 7.7% 3.59E-4 107202
[View Peptides]   PAT1 Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithfu... 2 3 7.7% 3.27E-4 88495
[View Peptides]   RNQ1 [PIN(+)] prion, an infectious protein conformation that is generally an ordered protein aggregate 2 3 7.7% 6.42E-4 42580
[View Peptides]   PIM1 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria; required ... 5 7 7.6% 5.35E-4 127112
[View Peptides]   YGR250C Putative RNA binding protein; localizes to stress granules induced by glucose deprivation; interacts... 4 4 7.6% 4.44E-4 89513
[View Peptides]   GBP2 Poly(A+) RNA-binding protein, involved in the export of mRNAs from the nucleus to the cytoplasm; sim... 2 2 7.5% 4.06E-4 48729
[View Peptides]   KEM1 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies involved i... 8 10 7.4% 5.67E-4 175459
[View Peptides]   RPT5 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 2 2 7.4% 3.99E-4 48256
[View Peptides]   RPT2 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 2 2 7.3% 3.97E-4 48828
[View Peptides]   GCR1 Transcriptional activator of genes involved in glycolysis; DNA-binding protein that interacts and fu... 2 3 7.2% 3.08E-4 94318
[View Peptides]   PRP19 Splicing factor associated with the spliceosome; contains a U-box, a motif found in a class of ubiqu... 2 2 7.2% 3.45E-4 56570
[View Peptides]   ACT1 Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functio... 2 2 7.2% 4.62E-4 41690
[View Peptides]   SYDC_YEAST (P04802) Aspartyl-tRNA synthetase, cytoplasmic (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS) 2 2 7.0% 3.12E-4 63384
[View Peptides]   VBA3 Permease of basic amino acids in the vacuolar membrane 2 2 7.0% 3.78E-4 50225
[View Peptides]   PFK2 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaero... 3 6 6.6% 5.42E-4 104618
[View Peptides]   STU2 Microtubule-associated protein (MAP) of the XMAP215/Dis1 family; regulates microtubule dynamics duri... 3 4 6.4% 3.9E-4 100918
[View Peptides]   YCR087W [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental a... 2 22 6.4% 0.0111 19825
[View Peptides]   PDC1_YEAST, DCP1... (P06169) Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (EC 4.1.1.-), (P06169) Pyruvate decarboxylase... 2 2 6.2% 3.08E-4 61364
[View Peptides]   TUB3 Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form... 2 2 6.1% 3.89E-4 49694
[View Peptides]   TUB1 Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form... 2 2 6.0% 3.88E-4 49800
[View Peptides]   RPA190 RNA polymerase I largest subunit A190 5 6 5.9% 3.12E-4 186431
[View Peptides]   PFK1 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaer... 3 3 5.9% 2.63E-4 107970
[View Peptides]   DBP2 Essential ATP-dependent RNA helicase of the DEAD-box protein family, involved in nonsense-mediated m... 2 2 5.9% 3.17E-4 60999
[View Peptides]   FCJ1 Mitochondrial inner membrane protein involved in formation and molecular structure of crista junctio... 2 4 5.7% 6.42E-4 61082
[View Peptides]   CCT6 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, essential protein that is re... 2 2 5.7% 3.17E-4 59924
[View Peptides]   SVL3 Protein of unknown function, mutant phenotype suggests a potential role in vacuolar function; green ... 2 2 5.6% 2.1E-4 92144
[View Peptides]   NUG1 GTPase that associates with nuclear 60S pre-ribosomes, required for export of 60S ribosomal subunits... 2 2 5.6% 3.33E-4 57709
[View Peptides]   CHS5 Component of the exomer complex, which also contains Csh6p, Bch1p, Bch2p, and Bud7p and is involved ... 3 3 5.5% 3.87E-4 73639
[View Peptides]   RPN1_YEAST (P38764) 26S proteasome regulatory subunit RPN1 (Proteasome non-ATPase subunit 1) 3 3 4.9% 2.62E-4 109361
[View Peptides]   LSG1 Putative GTPase involved in 60S ribosomal subunit biogenesis; required for the release of Nmd3p from... 2 3 4.8% 4.06E-4 72728
[View Peptides]   SVP26 Integral membrane protein of the early Golgi apparatus and endoplasmic reticulum, involved in COP II... 3 6 4.8% 0.00228 26284
[View Peptides]   IKI3 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; main... 4 4 4.7% 2.57E-4 152990
[View Peptides]   DEF1 RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot... 2 2 4.6% 2.35E-4 83973
[View Peptides]   SEC1 Sm-like protein involved in docking and fusion of exocytic vesicles through binding to assembled SNA... 2 4 4.6% 4.79E-4 83480
[View Peptides]   AFG2 ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; is essential for pre-60S mat... 2 2 4.5% 2.22E-4 84748
[View Peptides]   PCA1 Cadmium transporting P-type ATPase; may also have a role in copper and iron homeostasis; stabilized ... 2 2 4.4% 1.43E-4 131839
[View Peptides]   SWE1 Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity; localizes... 2 2 4.4% 2.12E-4 92468
[View Peptides]   RPA135 RNA polymerase I second largest subunit A135 3 3 4.3% 2.16E-4 135742
[View Peptides]   VTC3 Subunit of the vacuolar transporter chaperone (VTC) complex involved in membrane trafficking, vacuol... 3 3 4.3% 3.11E-4 96553
[View Peptides]   CDC48 ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p a... 2 4 4.1% 4.15E-4 91996
[View Peptides]   PEX8 Intraperoxisomal organizer of the peroxisomal import machinery, tightly associated with the lumenal ... 3 3 4.1% 4.41E-4 68165
[View Peptides]   AFI1 Arf3p polarization-specific docking factor, required for the polarized distribution of the ADP-ribos... 2 2 3.9% 1.94E-4 102250
[View Peptides]   SPR3 Sporulation-specific homolog of the yeast CDC3/10/11/12 family of bud neck microfilament genes; sept... 2 3 3.9% 5.08E-4 59845
[View Peptides]   YDR261C-D Retrotransposon TYA Gag and TYB Pol genes; in YDRCTY1-3 TYB is mutant and probably non-functional 3 3 3.9% 1.62E-4 181660
[View Peptides]   TIF4631 Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) that al... 2 3 3.7% 2.73E-4 107101
[View Peptides]   ACC1 Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to f... 5 5 3.6% 1.94E-4 250351
[View Peptides]   YER160C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 3 3.5% 1.48E-4 198568
[View Peptides]   gi|1945315, gi|1... gi|1945316|emb|CAA97035.1| TY1B [Saccharomyces cerevisiae], gi|1945315|emb|CAA97027.1| TY1B [Sacchar... 3 3 3.5% 1.48E-4 198621
[View Peptides]   gi|2131099, gi|6... gi|6686357|sp|P47100|YJZ9_YEAST Transposon Ty1 protein B, gi|2131099|emb|CAA89556.1| TY1B [Saccharom... 3 3 3.5% 1.48E-4 198592
[View Peptides]   gi|2120067, gi|7... gi|74627262|sp|Q12088.1|YL11B_YEAST RecName: Full=Transposon Ty1-LR1 Gag-Pol polyprotein; AltName: F... 3 3 3.5% 1.48E-4 198460
[View Peptides]   YOL103W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 3 3.5% 1.48E-4 198613
[View Peptides]   YGR027W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 3 3.5% 1.48E-4 198656
[View Peptides]   YER138C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 3 3.5% 1.48E-4 198561
[View Peptides]   YBR012W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 3 3.5% 1.48E-4 198868
[View Peptides]   gi|1945331, gi|1... gi|1945334|emb|CAA97182.1| TY1B [Saccharomyces cerevisiae], gi|1945331|emb|CAA97178.1| TY1B [Sacchar... 3 3 3.5% 1.48E-4 198659
[View Peptides]   YHR214C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 3 3.5% 1.45E-4 202816
[View Peptides]   gi|6686356, gi|2... gi|6686356|sp|P47098.2|YJ11B_YEAST RecName: Full=Transposon Ty1-JR1 Gag-Pol polyprotein; AltName: Fu... 3 3 3.5% 1.48E-4 198615
[View Peptides]   NAT1_YEAST (P12945) N-terminal acetyltransferase A complex subunit NAT1 (NatA complex subunit NAT1) (Amino-term... 2 2 3.5% 2.03E-4 98774
[View Peptides]   SKI2 Ski complex component and putative RNA helicase, mediates 3'-5' RNA degradation by the cytoplasmic e... 3 3 3.4% 2.02E-4 146058
[View Peptides]   DIS3 Exosome core complex catalytic subunit; possesses both endonuclease and 3'-5' exonuclease activity; ... 2 2 3.4% 1.73E-4 113707
[View Peptides]   TCB3 Lipid-binding protein, localized to the bud via specific mRNA transport; non-tagged protein detected... 3 3 3.3% 1.68E-4 171075
[View Peptides]   PAP1 Poly(A) polymerase, one of three factors required for mRNA 3'-end polyadenylation, forms multiprotei... 2 2 3.2% 3.05E-4 64552
[View Peptides]   KRI1 Essential nucleolar protein required for 40S ribosome biogenesis; physically and functionally intera... 2 2 3.0% 2.93E-4 68654
[View Peptides]   BNR1 Formin, nucleates the formation of linear actin filaments, involved in cell processes such as buddin... 2 3 2.6% 1.89E-4 156851
[View Peptides]   MNN4 Putative positive regulator of mannosylphosphate transferase (Mnn6p), involved in mannosylphosphoryl... 2 2 2.5% 1.47E-4 139380
[View Peptides]   RAD50 Subunit of MRX complex, with Mre11p and Xrs2p, involved in processing double-strand DNA breaks in ve... 2 2 2.4% 1.32E-4 152568
[View Peptides]   VIP1 Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; generation of IP7 by Vi... 2 3 2.4% 2.27E-4 129755
[View Peptides]   SAK1 Upstream serine/threonine kinase for the SNF1 complex; partially redundant with Elm1p and Tos3p; mem... 2 2 2.4% 1.52E-4 126872
[View Peptides]   POL3 Catalytic subunit of DNA polymerase delta; required for chromosomal DNA replication during mitosis a... 2 2 2.3% 1.58E-4 124591
[View Peptides]   SEC8 Essential 121kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p,... 2 2 2.3% 1.63E-4 122224
[View Peptides]   NUP188 Subunit of the nuclear pore complex (NPC), involved in the structural organization of the complex an... 2 2 2.1% 1.05E-4 188576
[View Peptides]   gi|416765, gi|287911 gi|416765|sp|P25655.2|NOT1_YEAST RecName: Full=General negative regulator of transcription subunit 1... 2 2 1.6% 8.22E-5 240332
[View Peptides]   URA2 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes t... 2 2 1.5% 7.83E-5 245123

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle