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Protein Overview: RKI1

General Information:
Name(s) found: RKI1 / YOR095C [SGD]
Description(s) found:
Found 31 descriptions.
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  • Ribose-5-phosphate ketol-isomerase, catalyzes the interconversion of ribose 5-phosphate and ribulose 5-phosphate in the pentose phosphate pathway; participates in pyridoxine biosynthesis [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 258 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: pyridoxine biosynthetic process [IMPLink to PubMed article]
    pentose-phosphate shunt [IGILink to PubMed article]
    ribosome biogenesis [RCALink to PubMed article]
    Molecular Function: ribose-5-phosphate isomerase activity [IMPLink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGVPKIDA LESLGNPLED AKRAAAYRAV DENLKFDDHK IIGIGSGSTV VYVAERIGQY  60
   61 LHDPKFYEVA SKFICIPTGF QSRNLILDNK LQLGSIEQYP RIDIAFDGAD EVDENLQLIK 120
  121 GGGACLFQEK LVSTSAKTFI VVADSRKKSP KHLGKNWRQG VPIEIVPSSY VRVKNDLLEQ 180
  181 LHAEKVDIRQ GGSAKAGPVV TDNNNFIIDA DFGEISDPRK LHREIKLLVG VVETGLFIDN 240
  241 ASKAYFGNSD GSVEVTEK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) APT1 ASC1 ATG27 BRX1 BUD20 EFT2, EFT1 EMG1 FKH2 GLN4 LSG1 MNL1 NAT3 RIA1 RKI1 RPL10 RPL11A RPL11B RPL12B, RPL12A RPL13A RPL13B RPL14A RPL14B RPL15A RPL16A RPL16B RPL17A RPL17B RPL18A, RPL18B RPL19B, RPL19A RPL1A, RPL1B RPL20A RPL21A RPL21B RPL22A RPL22B RPL23B, RPL23A RPL24A RPL24B RPL25 RPL26A RPL26B RPL27B RPL28 RPL29 RPL2A, RPL2B RPL30 RPL31A RPL31B RPL32 RPL33A RPL33B RPL34A RPL35A, RPL35B RPL36A RPL36B RPL37A RPL38 RPL40B, RPL40A RPL41A, RPL41B RPL42B, RPL42A RPL43B, RPL43A RPL5 RPL6A RPL6B RPL8A RPL8B RPL9A RPL9B RPP1B RPP2A RPS0A RPS0B RPS10A RPS10B RPS11A, RPS11B RPS13 RPS14B RPS15 RPS16B, RPS16A RPS17A RPS17B RPS18B, RPS18A RPS19A RPS19B RPS1A RPS2 RPS20 RPS21A RPS21B RPS22A RPS23B, RPS23A RPS24A, RPS24B RPS25A RPS25B RPS26A RPS26B RPS27A RPS27B RPS28A RPS28B RPS29A RPS29B RPS3 RPS30B, RPS30A RPS31 RPS4B, RPS4A RPS5 RPS6A, RPS6B RPS7B RPS8B, RPS8A RPS9A RPS9B RRP5 SOP4 SRO9 STM1 TEF1, TEF2 TOS4 TSR1 UTP15 UTP6

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen MIG2 RKI1 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data RKI1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148]
    [238..258]    		 PSI-BLAST 418.071898 D-ribose-5-phosphate isomerase (RpiA), catalytic domain; D-ribose-5-phosphate isomerase (RpiA), lid domain
    2 View Details [149..237] PSI-BLAST 418.071898 D-ribose-5-phosphate isomerase (RpiA), catalytic domain; D-ribose-5-phosphate isomerase (RpiA), lid domain


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle