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Protein Overview: RPL6B

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) RPL12B, RPL12A RPL13A RPL13B RPL16B RPL2A, RPL2B RPL6B RPS24A, RPS24B RPS7A
View Details (MIPS) Mewes HW, et al. (2004) RPL10 RPL11A RPL11B RPL12B, RPL12A RPL13A RPL13B RPL14A RPL14B RPL15A RPL15B RPL16A RPL16B RPL17A RPL17B RPL18A, RPL18B RPL19B, RPL19A RPL1A, RPL1B RPL20A RPL20B RPL21A RPL21B RPL22A RPL22B RPL23B, RPL23A RPL24A RPL24B RPL25 RPL26A RPL26B RPL27A RPL27B RPL28 RPL29 RPL2A, RPL2B RPL3 RPL30 RPL31A RPL31B RPL32 RPL33A RPL33B RPL34A RPL34B RPL35A, RPL35B RPL36A RPL36B RPL37A RPL37B RPL38 RPL39 RPL40B, RPL40A RPL41A, RPL41B RPL42B, RPL42A RPL43B, RPL43A RPL4A RPL4B RPL5 RPL6A RPL6B RPL7A RPL7B RPL8A RPL8B RPL9A RPL9B RPP0 RPP1A RPP1B RPP2A RPP2B
View Details Qiu et al. (2008) APT1 BUD20 EMG1 LSG1 NAT3 NMD3 RIA1 RKI1 RPL10 RPL11A RPL11B RPL12B, RPL12A RPL13A RPL13B RPL14A RPL14B RPL15A RPL15B RPL16A RPL16B RPL17A RPL17B RPL18A, RPL18B RPL19B, RPL19A RPL1A, RPL1B RPL20A RPL20B RPL21A RPL21B RPL22A RPL22B RPL23B, RPL23A RPL24A RPL24B RPL25 RPL26A RPL26B RPL27A RPL27B RPL28 RPL29 RPL2A, RPL2B RPL3 RPL30 RPL31A RPL31B RPL32 RPL33A RPL33B RPL34A RPL34B RPL35A, RPL35B RPL36A RPL36B RPL37A RPL37B RPL38 RPL39 RPL40B, RPL40A RPL41A, RPL41B RPL42B, RPL42A RPL43B, RPL43A RPL4A RPL4B RPL5 RPL6A RPL6B RPL7A RPL7B RPL8A RPL8B RPL9A RPL9B RPP0 RPP1A RPP1B RPP2A RPP2B RPS0A RPS0B RPS10A RPS10B RPS11A, RPS11B RPS12 RPS13 RPS14A RPS14B RPS15 RPS16B, RPS16A RPS17A RPS17B RPS18B, RPS18A RPS19A RPS19B RPS1A RPS1B RPS2 RPS20 RPS21A RPS21B RPS22A RPS22B RPS23B, RPS23A RPS24A, RPS24B RPS25A RPS25B RPS26A RPS26B RPS27A RPS27B RPS28A RPS28B RPS29A RPS29B RPS3 RPS30B, RPS30A RPS31 RPS4B, RPS4A RPS5 RPS6A, RPS6B RPS7A RPS7B RPS8B, RPS8A RPS9A RPS9B SOP4 STM1 TEF1, TEF2 TOS4 TSR1 VAR1 YML6 YPL199C

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run BIR1 No Comments Widlund PO, et al. (2005)
View Run LST8 No Comments Reinke A, et al. (2004)
View Run BIR1 No Comments Widlund PO, et al. (2005)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run MIH1 control 1 McCusker D, et al (2007)
View Run MIH1 experimental2 - mih1-2 McCusker D, et al (2007)
View Run RLF2 cac1: TAP-tagged Green EM, et al (2005)
View Run VAM3 sample: hx4 Hao Xu, et al. (2010)
View Run VAM3 Sample: HX14 - mixture in detergent (control). Hao Xu, et al. (2010)
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RPL6B Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..176] Pfam 69.552842 Ribosomal protein L6e No confident structure predictions are available.
2 View Details [81..176] Pfam 36.657577 No description for PF01159.10 was found. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • structural constituent of ribosome
  • 9.75663213016935 bayes_pls_golite062009
  • structural molecule activity
  • 9.17485893013108 bayes_pls_golite062009
  • RNA binding
  • 1.4457902513736 bayes_pls_golite062009
  • binding
  • 1.44371103155512 bayes_pls_golite062009
  • nucleic acid binding
  • 1.35678179370806 bayes_pls_golite062009
  • transcription regulator activity
  • 1.26877481073647 bayes_pls_golite062009
  • DNA binding
  • 0.809544484035708 bayes_pls_golite062009
  • translation regulator activity
  • 0.20179424040045 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.177099375659271 bayes_pls_golite062009
  • transcription factor activity
  • 0.145799514762697 bayes_pls_golite062009
  • protein binding
  • 0.096241933308752 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle