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Bait Protein: RPA135
Organism: Saccharomyces cerevisiae
Publication: Schneider DA, French SL, Osheim YN, Bailey AO, Vu L, Dodd J, Yates JR, Beyer AL, Nomura M. RNA polymerase II elongation factors Spt4p and Spt5p play roles in transcription elongation by RNA polymerase I and rRNA processing. Proc Natl Acad Sci U S A. 2006;103(34):12707-12.
Comments: his-HA tag on RPA135

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  Hit Protein Protein Desc Sequence Count Spectrum Count Sequence Coverage NSAF Mol. Wt.
[View Peptides]   RPC19 RNA polymerase subunit AC19, common to RNA polymerases I and III 7 18 81.0% 0.0141 16151
[View Peptides]   ASP1 Cytosolic L-asparaginase, involved in asparagine catabolism 30 96 74.0% 0.0281 41395
[View Peptides]   PBI2 Cytosolic inhibitor of vacuolar proteinase B, required for efficient vacuole inheritance; with thior... 6 6 69.3% 0.00891 8590
[View Peptides]   RPC40 RNA polymerase subunit AC40, common to RNA polymerase I and III 26 44 68.7% 0.0146 37687
[View Peptides]   AIM2 Cytoplasmic protein involved in mitochondrial function or organization; null mutant displays reduced... 27 76 67.5% 0.0344 27089
[View Peptides]   CUP1-2, CUP1-1 Metallothionein, binds copper and mediates resistance to high concentrations of copper and cadmium; ... 4 5 65.6% 0.00913 6650
[View Peptides]   CUP1-2, CUP1-1 Metallothionein, binds copper and mediates resistance to high concentrations of copper and cadmium; ... 4 5 65.6% 0.00913 6650
[View Peptides]   ADH1 Alcohol dehydrogenase, fermentative isozyme active as homo- or heterotetramers; required for the red... 31 87 64.7% 0.0278 36849
[View Peptides]   HYP2 Translation elongation factor eIF-5A, previously thought to function in translation initiation; simi... 9 21 60.5% 0.0149 17114
[View Peptides]   MXR1 Methionine-S-sulfoxide reductase, involved in the response to oxidative stress; protects iron-sulfur... 11 15 58.7% 0.00908 21141
[View Peptides]   COX17 Copper metallochaperone that transfers copper to Sco1p and Cox11p for eventual delivery to cytochrom... 3 3 58.0% 0.00484 8056
[View Peptides]   RPA14 RNA polymerase I subunit A14 5 6 54.7% 0.00488 14585
[View Peptides]   RPB10 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III 2 3 52.9% 0.00477 8278
[View Peptides]   RPA190 RNA polymerase I largest subunit A190 79 122 51.8% 0.00816 186431
[View Peptides]   YPR137C-A, YAR010C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 22 42 51.6% 0.0106 49072
[View Peptides]   YDR261C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YDRCTY1-3 TYB is mutant and probably no... 22 42 51.6% 0.0106 49009
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 24 44 51.6% 0.0111 48953
[View Peptides]   YGR027W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 24 44 51.6% 0.0111 49056
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 24 44 51.6% 0.0111 48953
[View Peptides]   GIS2 Protein with seven cysteine-rich CCHC zinc-finger motifs, similar to human CNBP, proposed to be invo... 7 10 51.6% 0.00728 17103
[View Peptides]   RPA135 RNA polymerase I second largest subunit A135 44 91 49.0% 0.00842 135742
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 20 40 46.8% 0.0101 49129
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 20 40 46.8% 0.0101 49129
[View Peptides]   YDR098C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 22 42 46.8% 0.0106 49057
[View Peptides]   SSE1 ATPase that is a component of the heat shock protein Hsp90 chaperone complex; binds unfolded protein... 30 37 45.9% 0.00595 77367
[View Peptides]   CDC8 Thymidylate and uridylate kinase, functions in de novo biosynthesis of pyrimidine deoxyribonucleotid... 6 8 44.4% 0.00412 24687
[View Peptides]   YGR038C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 21 36 44.1% 0.00911 49034
[View Peptides]   CCS1 Copper chaperone for superoxide dismutase Sod1p, involved in oxidative stress protection; Met-X-Cys-... 12 18 43.4% 0.00805 27330
[View Peptides]   YDR210C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 18 37 42.3% 0.00936 49187
[View Peptides]   YBR012W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 18 37 40.5% 0.00936 49068
[View Peptides]   HTA2 Histone H2A, core histone protein required for chromatin assembly and chromosome function; one of tw... 4 4 40.2% 0.00337 13989
[View Peptides]   HTA1 Histone H2A, core histone protein required for chromatin assembly and chromosome function; one of tw... 4 4 40.2% 0.00337 13989
[View Peptides]   TSA1 Thioredoxin peroxidase, acts as both a ribosome-associated and free cytoplasmic antioxidant; self-as... 5 6 38.3% 0.00341 21590
[View Peptides]   BMH1 14-3-3 protein, major isoform; controls proteome at post-transcriptional level, binds proteins and D... 9 11 37.8% 0.00459 30091
[View Peptides]   BAT2 Cytosolic branched-chain amino acid aminotransferase, homolog of murine ECA39; highly expressed duri... 7 9 33.5% 0.00267 41625
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 13 22 33.2% 0.00535 50033
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 13 22 33.2% 0.00535 50033
[View Peptides]   RPA49 RNA polymerase I subunit A49 16 27 31.8% 0.00725 46651
[View Peptides]   NBP35 Essential iron-sulfur cluster binding protein localized in the cytoplasm; forms a complex with Cfd1p... 6 8 31.7% 0.00272 35253
[View Peptides]   YDL086W Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi... 6 6 31.5% 0.00245 30837
[View Peptides]   GPD2 NAD-dependent glycerol 3-phosphate dehydrogenase, homolog of Gpd1p, expression is controlled by an o... 9 12 31.1% 0.00304 49422
[View Peptides]   YOL159C-A Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast ... 2 2 31.1% 0.00247 10933
[View Peptides]   GCV3 H subunit of the mitochondrial glycine decarboxylase complex, required for the catabolism of glycine... 5 5 30.0% 0.00328 18795
[View Peptides]   ENO2 Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosp... 8 10 29.7% 0.00255 46914
[View Peptides]   MRPL38 Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38)... 3 3 29.7% 0.00242 14905
[View Peptides]   CAB4 Probable pantetheine-phosphate adenylyltransferase (PPAT), which catalyzes the fourth step in the bi... 10 10 28.9% 0.00365 34307
[View Peptides]   RNR1 One of two large regulatory subunits of ribonucleotide-diphosphate reductase; the RNR complex cataly... 18 36 28.8% 0.00451 99561
[View Peptides]   RPC10 RNA polymerase subunit ABC10-alpha, found in RNA polymerase complexes I, II, and III 2 8 28.6% 0.0127 7716
[View Peptides]   RPB5 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects tra... 6 11 28.4% 0.0057 25079
[View Peptides]   BMH2 14-3-3 protein, minor isoform; controls proteome at post-transcriptional level, binds proteins and D... 7 9 28.2% 0.00367 31061
[View Peptides]   RPA12 RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is resp... 3 7 28.0% 0.00624 13661
[View Peptides]   RPA43 RNA polymerase I subunit A43 8 15 27.9% 0.00512 36224
[View Peptides]   RPA34 RNA polymerase I subunit A34.5 5 6 27.9% 0.00287 26875
[View Peptides]   HIS4 Multifunctional enzyme containing phosphoribosyl-ATP pyrophosphatase, phosphoribosyl-AMP cyclohydrol... 15 16 27.8% 0.00223 87721
[View Peptides]   ALD6 Cytosolic aldehyde dehydrogenase, activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; re... 10 13 27.8% 0.0029 54414
[View Peptides]   DET1 Acid phosphatase involved in the non-vesicular transport of sterols in both directions between the e... 9 11 27.8% 0.00367 39172
[View Peptides]   RIB1 GTP cyclohydrolase II; catalyzes the first step of the riboflavin biosynthesis pathway 6 7 27.5% 0.00226 38332
[View Peptides]   RPP0 Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e; shown to be phosphoryl... 7 7 27.2% 0.0025 33717
[View Peptides]   YDR261C-D Retrotransposon TYA Gag and TYB Pol genes; in YDRCTY1-3 TYB is mutant and probably non-functional 33 53 26.7% 0.00368 181660
[View Peptides]   HSP60 Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides... 12 12 26.7% 0.00234 60752
[View Peptides]   RPO26 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III; part of central core; simila... 2 4 26.5% 0.00287 17910
[View Peptides]   YER138C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 34 54 26.4% 0.00343 198561
[View Peptides]   LAP4 Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often... 12 17 25.9% 0.00368 57093
[View Peptides]   PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from ... 5 5 25.8% 0.00154 39566
[View Peptides]   ENO1 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph... 7 9 25.6% 0.00229 46816
[View Peptides]   RPB8 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III 4 5 25.3% 0.00381 16511
[View Peptides]   HRK1 Protein kinase implicated in activation of the plasma membrane H(+)-ATPase Pma1p in response to gluc... 15 17 25.2% 0.00249 85696
[View Peptides]   CCW14 Covalently linked cell wall glycoprotein, present in the inner layer of the cell wall 3 7 25.2% 0.00328 23268
[View Peptides]   ISA2 Protein required for maturation of mitochondrial and cytosolic Fe/S proteins, localizes to the mitoc... 2 7 23.8% 0.00421 20877
[View Peptides]   YDR316W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 31 51 23.2% 0.00324 198526
[View Peptides]   YER160C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 31 51 23.2% 0.00324 198568
[View Peptides]   YDR365W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 32 52 23.0% 0.0033 198658
[View Peptides]   CDC19 Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvat... 9 10 23.0% 0.00223 54545
[View Peptides]   SSC1 Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitoc... 13 16 22.5% 0.00272 70628
[View Peptides]   YGR027W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 31 46 22.3% 0.00292 198656
[View Peptides]   FAS1 Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty a... 27 34 22.2% 0.00185 228689
[View Peptides]   YDR210C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 29 48 22.1% 0.00305 198838
[View Peptides]   YDR098C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 29 49 22.0% 0.00311 198594
[View Peptides]   YBR012W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 29 48 21.6% 0.00304 198868
[View Peptides]   ADH2 Glucose-repressible alcohol dehydrogenase II, catalyzes the conversion of ethanol to acetaldehyde; i... 8 25 21.6% 0.008 36732
[View Peptides]   YGR038C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 28 43 21.3% 0.00273 198520
[View Peptides]   PET191 Protein required for assembly of cytochrome c oxidase; exists as an oligomer that is integral to the... 3 3 20.4% 0.00309 12394
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 6 8 20.2% 0.00202 49129
[View Peptides]   HEM2 Aminolevulinate dehydratase, a homo-octameric enzyme, catalyzes the conversion of 5-aminolevulinate ... 4 4 20.2% 0.0013 37740
[View Peptides]   RGC1 Pleckstrin homology domain containing protein proposed to function as a glycerol channel activator; ... 14 15 19.9% 0.00154 120395
[View Peptides]   FAS2 Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty ... 18 21 17.8% 0.00124 206945
[View Peptides]   RPE1 D-ribulose-5-phosphate 3-epimerase, catalyzes a reaction in the non-oxidative part of the pentose-ph... 2 2 17.6% 9.36E-4 25967
[View Peptides]   YEF3 Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes b... 11 14 17.4% 0.00149 115945
[View Peptides]   TOS1 Covalently-bound cell wall protein of unknown function; identified as a cell cycle regulated SBF tar... 7 9 17.1% 0.0022 47994
[View Peptides]   YAP3 Basic leucine zipper (bZIP) transcription factor 5 8 16.7% 0.0027 37955
[View Peptides]   BNA2 Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynt... 6 8 16.6% 0.00197 50775
[View Peptides]   IPP1 Cytoplasmic inorganic pyrophosphatase (PPase), homodimer that catalyzes the rapid exchange of oxygen... 2 2 16.4% 7.76E-4 32300
[View Peptides]   YGR161C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 17 19 15.9% 0.00121 198558
[View Peptides]   ISA1 Mitochondrial matrix protein involved in biogenesis of the iron-sulfur (Fe/S) cluster of Fe/S protei... 4 4 15.6% 0.00178 27675
[View Peptides]   TKL1 Transketolase, similar to Tkl2p; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate... 5 5 15.3% 8.19E-4 73806
[View Peptides]   YBL005W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 17 22 14.8% 0.0014 198968
[View Peptides]   FUR1 Uracil phosphoribosyltransferase, synthesizes UMP from uracil; involved in the pyrimidine salvage pa... 2 2 14.8% 0.00103 24594
[View Peptides]   YLR108C Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus... 3 3 14.2% 6.89E-4 55601
[View Peptides]   CPS1 Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions 7 8 14.1% 0.00155 64597
[View Peptides]   PRE10 Alpha 7 subunit of the 20S proteasome 2 2 13.9% 7.73E-4 31536
[View Peptides]   YML039W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 14 14 13.8% 8.88E-4 198571
[View Peptides]   YLR157C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 13 13 13.8% 8.25E-4 198544
[View Peptides]   FRA1 Protein involved in negative regulation of transcription of iron regulon; forms an iron independent ... 6 8 13.4% 0.00119 84924
[View Peptides]   HSC82 Cytoplasmic chaperone of the Hsp90 family, redundant in function and nearly identical with Hsp82p, a... 7 7 13.3% 0.00111 80900
[View Peptides]   YBL005W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 6 11 13.2% 0.00278 49285
[View Peptides]   ACO1 Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitoc... 7 7 13.1% 0.001 85368
[View Peptides]   FBA1 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis; catalyzes conversio... 3 3 13.1% 9.31E-4 39621
[View Peptides]   YJR027W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 14 14 13.0% 8.88E-4 198651
[View Peptides]   RNY1 Vacuolar RNase of the T(2) family, relocalizes to the cytosol where it cleaves tRNAs upon oxidative ... 3 3 12.9% 7.7E-4 50172
[View Peptides]   HAL1 Cytoplasmic protein involved in halotolerance; decreases intracellular Na+ (via Ena1p) and increases... 2 2 12.9% 7.58E-4 32994
[View Peptides]   YDJ1 Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein trans... 3 3 12.5% 8.17E-4 44671
[View Peptides]   YJR029W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 14 14 12.4% 8.88E-4 198616
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 6 6 12.4% 7.94E-4 93289
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 6 6 12.4% 7.94E-4 93289
[View Peptides]   DLD3 D-lactate dehydrogenase, part of the retrograde regulon which consists of genes whose expression is ... 4 4 12.3% 8.98E-4 55225
[View Peptides]   ILV6 Regulatory subunit of acetolactate synthase, which catalyzes the first step of branched-chain amino ... 3 3 12.0% 0.00108 33987
[View Peptides]   YDL057W Putative protein of unknown function; YDL057W is not an essential gene 3 4 11.9% 0.00136 36687
[View Peptides]   YHR214C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 13 13 11.8% 8.07E-4 202816
[View Peptides]   PDC1 Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates... 3 3 11.7% 5.93E-4 61495
[View Peptides]   RPP2A Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction... 2 2 11.3% 0.0021 10746
[View Peptides]   LPD1 Dihydrolipoamide dehydrogenase, the lipoamide dehydrogenase component (E3) of the pyruvate dehydroge... 4 4 11.2% 8.93E-4 54010
[View Peptides]   YLR227W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 13 13 11.1% 8.25E-4 198404
[View Peptides]   YAR009C Retrotransposon TYA Gag and TYB Pol genes; in YARCTY1-1 TYB is mutant and probably non-functional 6 6 11.0% 5.59E-4 136732
[View Peptides]   ACS2 Acetyl-coA synthetase isoform which, along with Acs1p, is the nuclear source of acetyl-coA for histo... 6 6 11.0% 9.78E-4 75492
[View Peptides]   RNR3 One of two large regulatory subunits of ribonucleotide-diphosphate reductase; the RNR complex cataly... 7 11 10.9% 0.00141 97515
[View Peptides]   KAR2 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i... 6 8 10.9% 0.00131 74468
[View Peptides]   KAR2 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i... 6 8 10.9% 0.00131 74468
[View Peptides]   YML045W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 11 11 10.6% 6.98E-4 198524
[View Peptides]   NPA3 Essential, conserved, cytoplasmic ATPase; phosphorylated by the Pcl1p-Pho85p kinase complex 3 3 10.6% 8.68E-4 43195
[View Peptides]   MBR1 Protein involved in mitochondrial functions and stress response; overexpression suppresses growth de... 3 4 10.6% 0.00131 36935
[View Peptides]   YDR132C Putative protein of unknown function 2 2 10.5% 4.5E-4 57194
[View Peptides]   YMR046C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 5 10.5% 0.00127 49274
[View Peptides]   YCR015C Putative protein of unknown function; YCR015C is not an essential gene 2 2 10.1% 7.03E-4 36278
[View Peptides]   SDH2 Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples t... 2 2 9.8% 8.37E-4 30231
[View Peptides]   CDC48 ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p a... 4 4 9.7% 5.33E-4 91996
[View Peptides]   SDH1 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxid... 4 5 9.7% 8.7E-4 70229
[View Peptides]   TRP2 Anthranilate synthase, catalyzes the initial step of tryptophan biosynthesis, forms multifunctional ... 3 3 9.7% 6.59E-4 56768
[View Peptides]   YJR028W Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 4 4 9.5% 0.00101 49112
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 6 6 9.5% 0.00152 48993
[View Peptides]   YOL103W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 6 6 9.5% 0.00152 49005
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 6 6 9.5% 0.00152 48993
[View Peptides]   YLR256W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 6 6 9.5% 0.00152 49003
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 6 6 9.5% 0.00152 48993
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 6 6 9.5% 0.00152 48953
[View Peptides]   IDH2 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of... 2 2 9.5% 6.04E-4 39739
[View Peptides]   IMD1 [DUBIOUS] Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located clo... 2 2 9.4% 5.53E-4 44386
[View Peptides]   GTB1 Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p, involved in removal of two gl... 4 4 9.3% 6.35E-4 79908
[View Peptides]   ALD4 Mitochondrial aldehyde dehydrogenase, required for growth on ethanol and conversion of acetaldehyde ... 2 2 9.2% 4.29E-4 56724
[View Peptides]   YDR170W-A Retrotransposon TYA Gag gene; Gag is a nucleocapsid protein that is the structural constituent of vi... 5 10 8.9% 0.00253 49445
[View Peptides]   PGK1 3-phosphoglycerate kinase, catalyzes transfer of high-energy phosphoryl groups from the acyl phospha... 2 2 8.9% 5.35E-4 44738
[View Peptides]   CTT1 Cytosolic catalase T, has a role in protection from oxidative damage by hydrogen peroxide 3 6 8.7% 0.00117 65742
[View Peptides]   RKM4 Ribosomal lysine methyltransferase specific for monomethylation of Rpl42ap and Rpl42bp (lysine 55); ... 3 3 8.7% 6.76E-4 57289
[View Peptides]   HSP82 Hsp90 chaperone required for pheromone signaling and negative regulation of Hsf1p; docks with Tom70p... 5 5 8.6% 7.85E-4 81406
[View Peptides]   ARG1 Arginosuccinate synthetase, catalyzes the formation of L-argininosuccinate from citrulline and L-asp... 2 2 8.6% 5.3E-4 46940
[View Peptides]   PFK1 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaer... 6 7 8.3% 7.9E-4 107970
[View Peptides]   YLR035C-A Retrotransposon TYA Gag and TYB Pol genes; polyprotein is processed to make a nucleocapsid-like prot... 6 6 8.1% 5.79E-4 131617
[View Peptides]   YPL260W Putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion pr... 2 3 7.8% 6.06E-4 62780
[View Peptides]   ADH3 Mitochondrial alcohol dehydrogenase isozyme III; involved in the shuttling of mitochondrial NADH to ... 4 8 7.5% 0.00238 40370
[View Peptides]   IMD2 Inosine monophosphate dehydrogenase, catalyzes the rate-limiting step in GTP biosynthesis, expressio... 2 2 7.3% 4.26E-4 56530
[View Peptides]   IMD3 Inosine monophosphate dehydrogenase, catalyzes the first step of GMP biosynthesis, member of a four-... 2 2 7.3% 4.26E-4 56585
[View Peptides]   CEF1 Essential splicing factor; associated with Prp19p and the spliceosome, contains an N-terminal c-Myb ... 2 2 7.1% 3.78E-4 67731
[View Peptides]   SAH1 S-adenosyl-L-homocysteine hydrolase, catabolizes S-adenosyl-L-homocysteine which is formed after don... 2 2 7.1% 4.96E-4 49126
[View Peptides]   HXK2 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol; predominant hexokin... 2 2 6.8% 4.58E-4 53943
[View Peptides]   SAN1 Ubiquitin-protein ligase, involved in the proteasome-dependent degradation of aberrant nuclear prote... 2 2 6.7% 3.65E-4 65618
[View Peptides]   YKU80 Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in telomere length maintenance, struct... 2 6 6.5% 0.00106 71241
[View Peptides]   YMR045C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 9 9 6.4% 5.71E-4 198898
[View Peptides]   GLT1 NAD(+)-dependent glutamate synthase (GOGAT), synthesizes glutamate from glutamine and alpha-ketoglut... 7 7 6.3% 3.63E-4 238100
[View Peptides]   YNL284C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 4 4 6.1% 0.00101 49309
[View Peptides]   YMR050C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 7 7 5.9% 4.44E-4 198554
[View Peptides]   LAT1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes... 2 2 5.8% 4.62E-4 51818
[View Peptides]   ERG13 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-Co... 2 2 5.5% 4.54E-4 55014
[View Peptides]   YAP1 Basic leucine zipper (bZIP) transcription factor required for oxidative stress tolerance; activated ... 2 2 5.4% 3.43E-4 72533
[View Peptides]   ARO8 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis 2 2 5.4% 4.45E-4 56178
[View Peptides]   CTR86 Essential protein of unknown function; upstream region contains a Gcn4p responsive site suggesting a... 2 2 5.3% 3.96E-4 65206
[View Peptides]   GFA1 Glutamine-fructose-6-phosphate amidotransferase, catalyzes the formation of glucosamine-6-P and glut... 2 2 5.2% 3.11E-4 80047
[View Peptides]   FUN30 Protein whose overexpression affects chromosome stability, potential Cdc28p substrate; homolog of Sn... 2 2 5.0% 1.97E-4 128507
[View Peptides]   NSP1 Essential component of the nuclear pore complex, which mediates nuclear import and export, found in ... 2 2 4.9% 2.71E-4 86516
[View Peptides]   ECM10 Heat shock protein of the Hsp70 family, localized in mitochondrial nucleoids, plays a role in protei... 3 6 4.8% 0.00104 70085
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 4 4 4.8% 0.00101 48953
[View Peptides]   YPR158C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 4 4 4.8% 0.00101 48965
[View Peptides]   YOR142W-A, YPR158W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 4.8% 5.06E-4 49098
[View Peptides]   YPR137C-A, YAR010C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 4.8% 5.06E-4 49072
[View Peptides]   YOR142W-A, YPR158W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 4.8% 5.06E-4 49098
[View Peptides]   YNL054W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 4.8% 5.06E-4 49232
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 4.8% 5.06E-4 49129
[View Peptides]   YML045W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 4.8% 5.06E-4 49122
[View Peptides]   YOL103W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 4 4 4.6% 2.54E-4 198613
[View Peptides]   TFP1 Subunit A of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase; protein prec... 3 6 4.5% 6.24E-4 118637
[View Peptides]   YBR139W Putative serine type carboxypeptidase with a role in phytochelatin synthesis; green fluorescent prot... 2 2 4.5% 4.38E-4 57639
[View Peptides]   YHR214C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 2 4.4% 4.66E-4 53326
[View Peptides]   SBE2 Protein involved in the transport of cell wall components from the Golgi to the cell surface; requir... 2 2 4.3% 2.58E-4 98971
[View Peptides]   SSE2 Member of the heat shock protein 70 (HSP70) family; may be involved in protein folding; localized to... 5 7 4.3% 0.00112 77621
[View Peptides]   YNL054W-B TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are req... 4 4 4.2% 2.55E-4 198197
[View Peptides]   UTR1 ATP-NADH kinase; phosphorylates both NAD and NADH; active as a hexamer; enhances the activity of fer... 2 2 4.2% 4.2E-4 59469
[View Peptides]   KCS1 Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; generation of high ener... 2 3 3.9% 3.18E-4 119550
[View Peptides]   URA2 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes t... 5 5 3.7% 2.51E-4 245123
[View Peptides]   COP1 Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secr... 2 2 3.2% 1.85E-4 135607
[View Peptides]   ASK10 Component of the RNA polymerase II holoenzyme, phosphorylated in response to oxidative stress; has a... 2 2 3.0% 1.94E-4 126864
[View Peptides]   YNL284C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 3 3 2.3% 1.9E-4 198997
[View Peptides]   AMS1 Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation; delivered to the vac... 2 2 1.9% 2.06E-4 124499
[View Peptides]   YDL025C Putative protein kinase, potentially phosphorylated by Cdc28p; YDL025C is not an essential gene 2 2 1.6% 3.59E-4 69615
[View Peptides]   YBL100W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 1.26E-4 202214
[View Peptides]   YFL002W-A, YGR161W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 1.26E-4 202038
[View Peptides]   YFL002W-A, YGR161W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 1.26E-4 202038
[View Peptides]   YDR261W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 1.26E-4 201961
[View Peptides]   YDR210W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 1.26E-4 202094
[View Peptides]   YDR034C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 1.26E-4 201964
[View Peptides]   YCL019W Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 1.4% 1.26E-4 202095
[View Peptides]   CHC1 Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport ... 2 2 1.3% 1.35E-4 187233
[View Peptides]   STB5 Transcription factor, involved in regulating multidrug resistance and oxidative stress response; for... 2 2 1.1% 3.0E-4 83473

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle