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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: RPA135
Protein Desc: RNA polymerase I second largest subunit A135
Sequence Coverage: 49.0%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSKVIKPPGQ ARTADFRTLE RESRFINPPK DKSAFPLLQE AVQPHIGSFN ALTEGPDGGL  60
   61  LNLGVKDIGE KVIFDGKPLN SEDEISNSGY LGNKLSVSVE QVSIAKPMSN DGVSSAVERK 120
  121  VYPSESRQRL TSYRGKLLLK LKWSVNNGEE NLFEVRDCGG LPVMLQSNRC HLNKMSPYEL 180
  181  VQHKEESDEI GGYFIVNGIE KLIRMLIVQR RNHPMAIIRP SFANRGASYS HYGIQIRSVR 240
  241  PDQTSQTNVL HYLNDGQVTF RFSWRKNEYL VPVVMILKAL CHTSDREIFD GIIGNDVKDS 300
  301  FLTDRLELLL RGFKKRYPHL QNRTQVLQYL GDKFRVVFQA SPDQSDLEVG QEVLDRIVLV 360
  361  HLGKDGSQDK FRMLLFMIRK LYSLVAGECS PDNPDATQHQ EVLLGGFLYG MILKEKIDEY 420
  421  LQNIIAQVRM DINRGMAINF KDKRYMSRVL MRVNENIGSK MQYFLSTGNL VSQSGLDLQQ 480
  481  VSGYTVVAEK INFYRFISHF RMVHRGSFFA QLKTTTVRKL LPESWGFLCP VHTPDGSPCG 540
  541  LLNHFAHKCR ISTQQSDVSR IPSILYSLGV APASHTFAAG PSLCCVQIDG KIIGWVSHEQ 600
  601  GKIIADTLRY WKVEGKTPGL PIDLEIGYVP PSTRGQYPGL YLFGGHSRML RPVRYLPLDK 660
  661  EDIVGPFEQV YMNIAVTPQE IQNNVHTHVE FTPTNILSIL ANLTPFSDFN QSPRNMYQCQ 720
  721  MGKQTMGTPG VALCHRSDNK LYRLQTGQTP IVKANLYDDY GMDNFPNGFN AVVAVISYTG 780
  781  YDMDDAMIIN KSADERGFGY GTMYKTEKVD LALNRNRGDP ITQHFGFGND EWPKEWLEKL 840
  841  DEDGLPYIGT YVEEGDPICA YFDDTLNKTK IKTYHSSEPA YIEEVNLIGD ESNKFQELQT 900
  901  VSIKYRIRRT PQIGDKFSSR HGQKGVCSRK WPTIDMPFSE TGIQPDIIIN PHAFPSRMTI 960
  961  GMFVESLAGK AGALHGIAQD STPWIFNEDD TPADYFGEQL AKAGYNYHGN EPMYSGATGE1020
 1021  ELRADIYVGV VYYQRLRHMV NDKFQVRSTG PVNSLTMQPV KGRKRHGGIR VGEMERDALI1080
 1081  GHGTSFLLQD RLLNSSDYTQ ASVCRECGSI LTTQQSVPRI GSISTVCCRR CSMRFEDAKK1140
 1141  LLTKSEDGEK IFIDDSQIWE DGQGNKFVGG NETTTVAIPF VLKYLDSELS AMGIRLRYNV1200
 1201  EPK

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 7.898 0.56 3491.82 10212.3 1 33.3 9 K.SAFPLLQEAVQPHIGSFNALTEGPDGGLLNLGVK.D
[No Spectrum] 4.3445 0.4577 2498.06 5710.1 1 50.0 1 K.VIFDGKPLNSEDEISNSGYLGNK.L
[No Spectrum] 3.8187 0.4351 2590.11 6073.6 1 31.2 1 K.LSVSVEQVSIAKPMSNDGVSSAVER.K
[No Spectrum] 3.8932 0.4099 1694.09 9381.9 1 57.7 2 K.WSVNNGEENLFEVR.D
[No Spectrum] 4.1318 0.2746 1450.58 3945.1 1 79.2 1 R.DCGGLPVMLQSNR.C
[No Spectrum] 2.8461 0.2988 1351.81 6614.6 1 59.1 1 R.GASYSHYGIQIR.S
[No Spectrum] 3.6495 0.4141 1353.39 6544.8 1 81.8 1 R.GASYSHYGIQIR.S
[No Spectrum] 5.5028 0.443 2776.79 8940.8 1 39.1 3 R.SVRPDQTSQTNVLHYLNDGQVTFR.F
[No Spectrum] 3.7428 0.3583 2776.8 6376.5 1 39.1 1 R.SVRPDQTSQTNVLHYLNDGQVTFR.F
[No Spectrum] 4.3935 0.3075 1548.48 6433.0 1 79.2 2 R.KNEYLVPVVMILK.A
[No Spectrum] 2.624 0.1274 1164.55 10004.3 53 55.6 1 R.TQVLQYLGDK.F
[No Spectrum] 3.0713 0.1099 1165.96 4634.5 3 77.8 1 R.TQVLQYLGDK.F
[No Spectrum] 5.1723 0.2647 2333.6 8150.9 1 38.8 1 R.VVFQASPDQSDLEVGQEVLDR.I
[No Spectrum] 5.6352 0.3855 2334.25 7022.3 1 65.0 2 R.VVFQASPDQSDLEVGQEVLDR.I
[No Spectrum] 7.0815 0.5798 3231.87 8437.0 1 34.2 3 R.IPSILYSLGVAPASHTFAAGPSLCCVQIDGK.I
[No Spectrum] 4.0674 0.4561 2038.84 4221.2 1 42.6 1 K.IIGWVSHEQGKIIADTLR.Y
[No Spectrum] 2.3112 0.2166 801.91 5226.3 1 83.3 1 K.IIADTLR.Y
[No Spectrum] 4.6344 0.4772 1925.97 6276.3 1 61.8 6 K.TPGLPIDLEIGYVPPSTR.G
[No Spectrum] 4.2901 0.4625 1552.6 6630.6 1 73.1 2 R.GQYPGLYLFGGHSR.M
[No Spectrum] 2.2075 0.2613 1159.56 5257.2 15 56.2 1 R.NMYQCQMGK.Q
[No Spectrum] 3.3389 0.3636 1428.72 5276.7 1 66.7 1 K.QTMGTPGVALCHR.S
[No Spectrum] 3.6255 0.4625 1383.01 8052.9 1 77.3 1 R.GFGYGTMYKTEK.V
[No Spectrum] 3.7063 0.3637 1803.9 7450.0 1 53.3 1 R.NRGDPITQHFGFGNDE.W
[No Spectrum] 4.2804 0.4849 2345.38 6896.4 1 36.8 1 R.NRGDPITQHFGFGNDEWPKE.W
[No Spectrum] 5.5362 0.3875 4010.69 8561.2 1 26.5 1 K.EWLEKLDEDGLPYIGTYVEEGDPICAYFDDTLNK.T
[No Spectrum] 3.9759 0.4329 3323.73 9250.8 1 25.9 1 K.LDEDGLPYIGTYVEEGDPICAYFDDTLNK.T
[No Spectrum] 4.7996 0.4127 2497.6 5980.2 1 57.1 1 K.TYHSSEPAYIEEVNLIGDESNK.F
[No Spectrum] 5.2247 0.3925 3670.61 5319.4 1 26.6 5 K.TYHSSEPAYIEEVNLIGDESNKFQELQTVSIK.Y
[No Spectrum] 6.7548 0.4949 3209.81 7726.2 1 36.1 2 R.KWPTIDMPFSETGIQPDIIINPHAFPSR.M
[No Spectrum] 3.2711 0.3656 1384.97 8725.2 1 62.5 2 R.MTIGMFVESLAGK.A
[No Spectrum] 6.6686 0.4805 3478.9 6854.3 1 32.3 1 K.AGALHGIAQDSTPWIFNEDDTPADYFGEQLAK.A
[No Spectrum] 5.9201 0.4574 2360.07 6822.8 1 65.8 2 T.PWIFNEDDTPADYFGEQLAK.A
[No Spectrum] 3.0997 0.3897 1274.85 5538.8 1 88.9 1 R.HMVNDKFQVR.S
[No Spectrum] 3.6434 0.4131 1673.93 7857.1 1 66.7 1 R.STGPVNSLTMQPVKGR.K
[No Spectrum] 3.3806 0.3764 1801.4 8733.2 1 50.0 1 R.STGPVNSLTMQPVKGRK.R
[No Spectrum] 3.7566 0.3019 2345.1 7228.0 1 42.5 1 R.VGEMERDALIGHGTSFLLQDR.L
[No Spectrum] 5.2281 0.4674 2348.56 8518.8 1 32.5 3 R.VGEMERDALIGHGTSFLLQDR.L
[No Spectrum] 4.8969 0.5328 1614.44 10098.4 1 76.9 6 R.LLNSSDYTQASVCR.E
[No Spectrum] 4.6585 0.3867 3173.33 10799.3 1 32.4 3 R.LLNSSDYTQASVCRECGSILTTQQSVPR.I
[No Spectrum] 4.0406 0.4758 1577.33 7931.5 1 69.2 2 R.ECGSILTTQQSVPR.I
[No Spectrum] 5.1573 0.4321 2510.89 8745.7 1 50.0 3 K.SEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 4.798 0.3889 1865.51 8990.0 1 70.0 6 K.IFIDDSQIWEDGQGNK.F
[No Spectrum] 4.9624 0.4106 1794.7 6831.5 1 65.6 3 K.FVGGNETTTVAIPFVLK.Y
[No Spectrum] 4.3654 0.4196 1357.3 7841.7 1 86.4 1 K.YLDSELSAMGIR.L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle