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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: YNL054W-B
Protein Desc: TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are req...
Sequence Coverage: 4.2%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MESQQLSQHS PISHGSACAS VTSKEVHTNQ DPLDVSASKI QEYDKASTKA NSQQTTTPAS  60
   61  SAVPENPHHA SPQTAQSHSP QNGPYPQQCM MTQNQANPSD WSFYGRPSMI PYTPYQMSPM 120
  121  YFPPGPHSQF PQYPSSVGTP LSTPSPESGN TFTDSSSADS DMTSTKKYVR PPPMLTSPND 180
  181  FLNWVKTYIK FLQNSNLGGI IPTVNGKPVR QITDDELTFL YNTFQIFAPS QFLPTWVKDI 240
  241  LSVDYTDIMK ILSKSIEKMQ SDTQEANDIV TLANLQYNGS TPADAFETKV TNIIDRLNNN 300
  301  GIHINNKVAC QLIMRGLSGE YKFLRYTRHR HLNMTVAELF LDIHAIYEEQ QGSRNSKPNY 360
  361  RRNPSDEKND SRSYTNTTKP KVIARNPQKT NNSKSKTARA HNVSTSNNSP STDNDSISKS 420
  421  TTEPIQLNNK HDLHLGQKLT ESTVNHTNHS DDELPGHLLL DSGASRTLIR SAHHIHSASS 480
  481  NPDINVVDAQ KRNIPINAIG DLQFHFQDNT KTSIKVLHTP NIAYDLLSLN ELAAVDITAC 540
  541  FTKNVLERSD GTVLAPIVKY GDFYWVSKKY LLPSNISVPT INNVHTSEST RKYPYPFIHR 600
  601  MLAHANAQTI RYSLKNNTIT YFNESDVDWS SAIDYQCPDC LIGKSTKHRH IKGSRLKYQN 660
  661  SYEPFQYLHT DIFGPVHNLP KSAPSYFISF TDETTKFRWV YPLHDRREDS ILDVFTTILA 720
  721  FIKNQFQASV LVIQMDRGSE YTNRTLHKFL EKNGITPCYT TTADSRAHGV AERLNRTLLD 780
  781  DCRTQLQCSG LPNHLWFSAI EFSTIVRNSL ASPKSKKSAR QHAGLAGLDI STLLPFGQPV 840
  841  IVNDHNPNSK IHPRGIPGYA LHPSRNSYGY IIYLPSLKKT VDTTNYVILQ GKESRLDQFN 900
  901  YDALTFDEDL NRLTASYQSF IASNEIQQSD DLNFQSDIEL HPEQPRNVLS KAVSPTDSTP 960
  961  PSTHTEDSKR VSKTNIRAPR EVDPNISKSD ILPSKKRSST PQISDIESTG SGGMHRLDVP1020
 1021  LLAPMSQSNT HESSHTSKSK DFRHSDSYSD NETNHTNVPI SSTGGTNNKT VPQTSEQETE1080
 1081  KRIIHRSPSI DTSSSESNSL HHVVPIKTSD TCPKENTEES IIADLPLPDL PPEPPTKLSD1140
 1141  SFKELPPINS RQTNSSLGGI GDSNAYTTIN SKKRSLEDNE TEIKVSRDTW NTKNMRSLEP1200
 1201  PRSKKRIHLI AAVKAVKSIK PIRTTLRYDE AITYNKDIKE KEKYIEAYHK EVNQLLKMKT1260
 1261  WDTDKYYDRK EIDPKRVINS MFIFNRKRDG THKARFVARG DIQHPDTYDS GMQSNTVHHY1320
 1321  ALMTSLSLAL DNNYYITQLD ISSAYLYADI KEELYIRPPP HLGMNDKLIR LKKSLYGLKQ1380
 1381  SGANWYETIK SYLIEQCDME EVRGWSCVFK NSQVTICLFV DDMILFSKDL NANKKIITTL1440
 1441  KKQYDTKIIN LGESDNEIQY DILGLEIKYQ RSKYMKLGME KSLTEKLPKL NVHLNPKGKK1500
 1501  LSAPGQPGLY IDQDELEIDE DEYKEKVHEM QKLIGLASYV GYKFRFDLLY YINTLAQHIL1560
 1561  FPSRQVLDMT YELIQFMWDT RDKQLIWHKN KPTKPDNKLV AISDASYGNQ PYYKSQIGNI1620
 1621  FLLNGKVIGG KSTKASLTCT STTEAEIHAV SEAIPLLNNL SHLVQELNKK PIIKGLLTDS1680
 1681  RSTISIIKST NEEKFRNRFF GTKAMRLRDE VSGNNLYVYY IETKKNIADV MTKPLPIKTF1740
 1741  KLLTNKWIH

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 6.0681 0.254 3017.04 7389.4 1 34.3 1 K.LTESTVNHTNHSDDELPGHLLLDSGASR.T
[No Spectrum] 6.4475 0.5211 2228.1 9703.8 1 67.5 1 R.SAHHIHSASSNPDINVVDAQK.R
[No Spectrum] 5.1468 0.3663 2228.29 7460.1 1 37.5 1 R.SAHHIHSASSNPDINVVDAQK.R
[No Spectrum] 4.3147 0.4392 2699.5 7563.5 1 29.3 1 K.KYLLPSNISVPTINNVHTSESTRK.Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle