YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RPS28B

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run BOI1 Sample boi1 with gst from october 2005 McCusker D, et al (2007)
View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

  PROTEIN(S) PUBLICATION
View Data RPS28B Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..67] Pfam 43.823909 Ribosomal protein S28e No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • structural constituent of ribosome
  • 7.45319063235379 bayes_pls_golite062009
  • structural molecule activity
  • 6.87843523680097 bayes_pls_golite062009
  • translation elongation factor activity
  • 3.58178742491041 bayes_pls_golite062009
  • RNA binding
  • 3.30183895019873 bayes_pls_golite062009
  • nucleic acid binding
  • 2.61313484113692 bayes_pls_golite062009
  • binding
  • 2.20683882867211 bayes_pls_golite062009
  • DNA binding
  • 1.87254683997276 bayes_pls_golite062009
  • 1.49823328757628 bayes_pls_golite062009
  • translation regulator activity
  • 1.46320772716954 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 1.40718318783582 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 1.35850109411274 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 1.35845277283398 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 1.35845277283398 bayes_pls_golite062009
  • translation initiation factor activity
  • 1.27539679024898 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.10289736160471 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.96886436248958 bayes_pls_golite062009
  • mRNA binding
  • 0.66243778931831 bayes_pls_golite062009
  • ribonuclease activity
  • 0.498439111185072 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 0.438266295385131 bayes_pls_golite062009
  • exoribonuclease activity
  • 0.39131721416336 bayes_pls_golite062009
  • ligase activity
  • 0.346041081217685 bayes_pls_golite062009
  • transcription regulator activity
  • 0.259353733157995 bayes_pls_golite062009
  • nuclease activity
  • 0.17660139576327 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
  • 0.151650064901878 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 0.0717589400404304 bayes_pls_golite062009
  • protein binding
  • 0.0528188351789111 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle